© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|1714 |
| Gene name | |
| Location | Contig_154:14285..15346 |
| Strand | + |
| Gene length (bp) | 1061 |
| Transcript length (bp) | 951 |
| Coding sequence length (bp) | 951 |
| Protein length (aa) | 317 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00106 | adh_short | short chain dehydrogenase | 6.3E-20 | 16 | 161 |
| PF13561 | adh_short_C2 | Enoyl-(Acyl carrier protein) reductase | 1.5E-07 | 24 | 143 |
| PF08659 | KR | KR domain | 5.4E-08 | 16 | 96 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q8BYK4|RDH12_MOUSE | Retinol dehydrogenase 12 OS=Mus musculus GN=Rdh12 PE=2 SV=1 | 14 | 298 | 1.0E-19 |
| sp|Q6RVV4|TIC32_PEA | Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum GN=TIC32 PE=1 SV=1 | 11 | 241 | 2.0E-18 |
| sp|O74959|YJCD_SCHPO | Uncharacterized oxidoreductase C736.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC736.13 PE=3 SV=1 | 7 | 272 | 5.0E-18 |
| sp|P59837|RDH12_BOVIN | Retinol dehydrogenase 12 OS=Bos taurus GN=RDH12 PE=2 SV=1 | 14 | 293 | 6.0E-18 |
| sp|Q8NBN7|RDH13_HUMAN | Retinol dehydrogenase 13 OS=Homo sapiens GN=RDH13 PE=1 SV=2 | 14 | 302 | 2.0E-17 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q8BYK4|RDH12_MOUSE | Retinol dehydrogenase 12 OS=Mus musculus GN=Rdh12 PE=2 SV=1 | 14 | 298 | 1.0E-19 |
| sp|Q6RVV4|TIC32_PEA | Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum GN=TIC32 PE=1 SV=1 | 11 | 241 | 2.0E-18 |
| sp|O74959|YJCD_SCHPO | Uncharacterized oxidoreductase C736.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC736.13 PE=3 SV=1 | 7 | 272 | 5.0E-18 |
| sp|P59837|RDH12_BOVIN | Retinol dehydrogenase 12 OS=Bos taurus GN=RDH12 PE=2 SV=1 | 14 | 293 | 6.0E-18 |
| sp|Q8NBN7|RDH13_HUMAN | Retinol dehydrogenase 13 OS=Homo sapiens GN=RDH13 PE=1 SV=2 | 14 | 302 | 2.0E-17 |
| sp|Q9HBH5|RDH14_HUMAN | Retinol dehydrogenase 14 OS=Homo sapiens GN=RDH14 PE=1 SV=1 | 14 | 298 | 3.0E-17 |
| sp|Q9ERI6|RDH14_MOUSE | Retinol dehydrogenase 14 OS=Mus musculus GN=Rdh14 PE=1 SV=1 | 14 | 298 | 9.0E-17 |
| sp|Q96NR8|RDH12_HUMAN | Retinol dehydrogenase 12 OS=Homo sapiens GN=RDH12 PE=1 SV=3 | 14 | 298 | 1.0E-16 |
| sp|Q8CEE7|RDH13_MOUSE | Retinol dehydrogenase 13 OS=Mus musculus GN=Rdh13 PE=1 SV=1 | 14 | 241 | 2.0E-16 |
| sp|Q8TC12|RDH11_HUMAN | Retinol dehydrogenase 11 OS=Homo sapiens GN=RDH11 PE=1 SV=2 | 14 | 262 | 5.0E-16 |
| sp|A2RVM0|TIC32_ARATH | Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana GN=TIC32 PE=2 SV=1 | 11 | 298 | 8.0E-16 |
| sp|Q5F389|WWOX_CHICK | WW domain-containing oxidoreductase OS=Gallus gallus GN=WWOX PE=2 SV=2 | 10 | 219 | 5.0E-14 |
| sp|Q9QYF1|RDH11_MOUSE | Retinol dehydrogenase 11 OS=Mus musculus GN=Rdh11 PE=1 SV=2 | 14 | 227 | 7.0E-14 |
| sp|Q5SS80|DHR13_MOUSE | Dehydrogenase/reductase SDR family member 13 OS=Mus musculus GN=Dhrs13 PE=1 SV=1 | 14 | 311 | 2.0E-13 |
| sp|Q91WL8|WWOX_MOUSE | WW domain-containing oxidoreductase OS=Mus musculus GN=Wwox PE=1 SV=1 | 10 | 219 | 2.0E-13 |
| sp|Q9NZC7|WWOX_HUMAN | WW domain-containing oxidoreductase OS=Homo sapiens GN=WWOX PE=1 SV=1 | 10 | 219 | 2.0E-13 |
| sp|Q5R9W5|WWOX_PONAB | WW domain-containing oxidoreductase OS=Pongo abelii GN=WWOX PE=2 SV=1 | 10 | 219 | 3.0E-13 |
| sp|O80333|POR_MARPA | Protochlorophyllide reductase, chloroplastic OS=Marchantia paleacea GN=PORA PE=2 SV=1 | 6 | 228 | 2.0E-12 |
| sp|Q17QU7|DHR13_BOVIN | Dehydrogenase/reductase SDR family member 13 OS=Bos taurus GN=DHRS13 PE=2 SV=1 | 14 | 311 | 2.0E-12 |
| sp|Q9VLU5|WWOX_DROME | WW domain-containing oxidoreductase OS=Drosophila melanogaster GN=Wwox PE=2 SV=1 | 10 | 201 | 3.0E-12 |
| sp|Q6UX07|DHR13_HUMAN | Dehydrogenase/reductase SDR family member 13 OS=Homo sapiens GN=DHRS13 PE=2 SV=1 | 14 | 311 | 6.0E-12 |
| sp|O75828|CBR3_HUMAN | Carbonyl reductase [NADPH] 3 OS=Homo sapiens GN=CBR3 PE=1 SV=3 | 18 | 225 | 2.0E-11 |
| sp|Q8N5I4|DHRSX_HUMAN | Dehydrogenase/reductase SDR family member on chromosome X OS=Homo sapiens GN=DHRSX PE=2 SV=2 | 6 | 229 | 3.0E-11 |
| sp|Q8MI29|CBR1_MACFA | Carbonyl reductase [NADPH] 1 OS=Macaca fascicularis GN=CBR1 PE=2 SV=1 | 18 | 219 | 1.0E-10 |
| sp|Q5RCU5|CBR1_PONAB | Carbonyl reductase [NADPH] 1 OS=Pongo abelii GN=CBR1 PE=2 SV=3 | 18 | 219 | 1.0E-10 |
| sp|P16152|CBR1_HUMAN | Carbonyl reductase [NADPH] 1 OS=Homo sapiens GN=CBR1 PE=1 SV=3 | 18 | 219 | 4.0E-10 |
| sp|Q28960|CBR1_PIG | Carbonyl reductase [NADPH] 1 OS=Sus scrofa GN=CBR1 PE=1 SV=3 | 18 | 219 | 2.0E-09 |
| sp|Q92247|BLI4_NEUCR | Putative oxidoreductase bli-4, mitochondrial OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=bli-4 PE=1 SV=1 | 7 | 243 | 3.0E-09 |
| sp|Q803A8|WWOX_DANRE | WW domain-containing oxidoreductase OS=Danio rerio GN=wwox PE=2 SV=1 | 10 | 219 | 4.0E-09 |
| sp|Q42536|PORA_ARATH | Protochlorophyllide reductase A, chloroplastic OS=Arabidopsis thaliana GN=PORA PE=1 SV=2 | 17 | 140 | 6.0E-09 |
| sp|P47844|CBR1_RABIT | Carbonyl reductase [NADPH] 1 OS=Oryctolagus cuniculus GN=CBR1 PE=2 SV=2 | 18 | 219 | 8.0E-09 |
| sp|A6QP05|DHR12_BOVIN | Dehydrogenase/reductase SDR family member 12 OS=Bos taurus GN=DHRS12 PE=2 SV=1 | 14 | 223 | 1.0E-08 |
| sp|Q8W3D9|PORB_ORYSJ | Protochlorophyllide reductase B, chloroplastic OS=Oryza sativa subsp. japonica GN=PORB PE=2 SV=1 | 16 | 155 | 2.0E-08 |
| sp|Q8VBZ0|DHRSX_MOUSE | Dehydrogenase/reductase SDR family member on chromosome X homolog OS=Mus musculus GN=Dhrsx PE=1 SV=2 | 6 | 300 | 4.0E-08 |
| sp|P48758|CBR1_MOUSE | Carbonyl reductase [NADPH] 1 OS=Mus musculus GN=Cbr1 PE=1 SV=3 | 18 | 219 | 9.0E-08 |
| sp|Q42850|PORB_HORVU | Protochlorophyllide reductase B, chloroplastic OS=Hordeum vulgare GN=PORB PE=2 SV=1 | 18 | 140 | 1.0E-07 |
| sp|O66148|POR_LEPBY | Light-dependent protochlorophyllide reductase OS=Leptolyngbya boryana GN=por PE=3 SV=2 | 16 | 122 | 1.0E-07 |
| sp|P21218|PORB_ARATH | Protochlorophyllide reductase B, chloroplastic OS=Arabidopsis thaliana GN=PORB PE=1 SV=3 | 4 | 122 | 2.0E-07 |
| sp|O48741|PORC_ARATH | Protochlorophyllide reductase C, chloroplastic OS=Arabidopsis thaliana GN=PORC PE=1 SV=1 | 16 | 122 | 2.0E-07 |
| sp|Q39617|POR_CHLRE | Protochlorophyllide reductase, chloroplastic OS=Chlamydomonas reinhardtii GN=PORA PE=3 SV=1 | 16 | 122 | 2.0E-07 |
| sp|Q41249|PORA_CUCSA | Protochlorophyllide reductase, chloroplastic OS=Cucumis sativus GN=PORA PE=2 SV=1 | 6 | 122 | 2.0E-07 |
| sp|P35320|OXIR_STRLI | Probable oxidoreductase OS=Streptomyces lividans PE=3 SV=1 | 11 | 156 | 2.0E-07 |
| sp|P37959|YUSZ_BACSU | Uncharacterized oxidoreductase YusZ OS=Bacillus subtilis (strain 168) GN=yusZ PE=3 SV=2 | 18 | 173 | 3.0E-07 |
| sp|Q9SDT1|POR_DAUCA | Protochlorophyllide reductase, chloroplastic OS=Daucus carota GN=POR1 PE=2 SV=1 | 16 | 122 | 5.0E-07 |
| sp|Q8MJY8|PGDH_MACFA | 15-hydroxyprostaglandin dehydrogenase [NAD(+)] OS=Macaca fascicularis GN=HPGD PE=2 SV=1 | 13 | 229 | 1.0E-06 |
| sp|P15428|PGDH_HUMAN | 15-hydroxyprostaglandin dehydrogenase [NAD(+)] OS=Homo sapiens GN=HPGD PE=1 SV=1 | 13 | 230 | 1.0E-06 |
| sp|Q01289|POR_PEA | Protochlorophyllide reductase, chloroplastic OS=Pisum sativum GN=3PCR PE=1 SV=1 | 17 | 122 | 1.0E-06 |
| sp|Q59987|POR_SYNY3 | Light-dependent protochlorophyllide reductase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=por PE=3 SV=2 | 16 | 240 | 2.0E-06 |
| sp|P70684|PGDH_CAVPO | 15-hydroxyprostaglandin dehydrogenase [NAD(+)] OS=Cavia porcellus GN=HPGD PE=2 SV=1 | 13 | 229 | 4.0E-06 |
| sp|Q53877|DNRU_STRS5 | Putative daunorubicin C-13 ketoreductase DnrU OS=Streptomyces sp. (strain C5) PE=3 SV=1 | 8 | 298 | 4.0E-06 |
| sp|Q9STY8|HSD2_ARATH | 11-beta-hydroxysteroid dehydrogenase-like 2 OS=Arabidopsis thaliana GN=HSD2 PE=2 SV=1 | 10 | 162 | 5.0E-06 |
| sp|Q8VCC1|PGDH_MOUSE | 15-hydroxyprostaglandin dehydrogenase [NAD(+)] OS=Mus musculus GN=Hpgd PE=1 SV=1 | 13 | 229 | 1.0E-05 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 28 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|1714 MFGSLPNPTKDCTGLTVIVTGSNTGLGLEAARHLVRLNAAKVIIACRTVEKGEAARRDIEASTQRKGIVEVWQLD LSSFDNVKDFASRANKLHRLDVLINNASSLFLYYSKHEGYETTITVNVISTLLLSILLLPILRQTGSRFNKGTRI VMVSSGTAFLPIFPERKAKHVLDKLKTESSMQERYATSKLLQLMMMRKLAEAIDASPKGRVVVNALCPGVCNTGI FRDLSSFPLNVVQWMIAHTWLVRSSETGSRALLAAAFAGDETHGGWMMHCKLLRYWPAAMNGPKGAELTDKIWGE LADALETIEPGVMALV* |
| Coding | >OphauG2|1714 ATGTTTGGCAGTCTACCAAATCCGACAAAAGACTGCACCGGCCTCACCGTCATTGTGACGGGCTCGAATACCGGC CTAGGACTGGAAGCAGCAAGACACCTTGTGCGTCTAAATGCTGCCAAGGTGATTATTGCTTGTCGCACTGTTGAA AAGGGCGAGGCGGCTCGTCGAGATATCGAGGCCTCGACGCAGCGCAAGGGGATCGTCGAGGTCTGGCAGCTCGAT CTCAGCTCCTTTGACAACGTCAAGGACTTTGCAAGTCGCGCCAATAAGCTCCATCGACTCGATGTGCTCATCAAT AATGCCAGCAGCCTGTTCCTGTATTACTCCAAGCACGAGGGCTACGAGACCACGATTACCGTCAACGTCATCTCG ACGCTGCTGCTCTCCATCTTGCTGCTTCCCATTCTGCGGCAGACTGGCTCACGCTTCAACAAGGGAACTCGCATT GTCATGGTCTCGTCGGGGACAGCATTCCTGCCAATTTTCCCCGAACGAAAGGCAAAGCACGTGCTCGACAAACTC AAGACAGAGTCCAGCATGCAAGAGCGCTACGCCACCAGCAAGCTCCTGCAGCTCATGATGATGCGCAAGCTTGCC GAAGCGATTGACGCGTCGCCCAAGGGCCGTGTCGTGGTCAATGCGCTCTGCCCCGGCGTGTGCAACACGGGCATC TTTCGTGACCTTTCCTCTTTCCCACTAAACGTCGTGCAGTGGATGATTGCCCACACCTGGCTTGTTCGCAGCTCG GAAACGGGATCACGCGCCCTGCTGGCGGCAGCGTTTGCGGGCGACGAGACGCATGGCGGGTGGATGATGCACTGC AAGTTGCTGCGATACTGGCCAGCGGCGATGAACGGGCCAAAGGGAGCTGAATTGACGGACAAGATTTGGGGTGAA CTGGCTGACGCGCTCGAAACGATTGAGCCTGGCGTCATGGCCCTTGTATAG |
| Transcript | >OphauG2|1714 ATGTTTGGCAGTCTACCAAATCCGACAAAAGACTGCACCGGCCTCACCGTCATTGTGACGGGCTCGAATACCGGC CTAGGACTGGAAGCAGCAAGACACCTTGTGCGTCTAAATGCTGCCAAGGTGATTATTGCTTGTCGCACTGTTGAA AAGGGCGAGGCGGCTCGTCGAGATATCGAGGCCTCGACGCAGCGCAAGGGGATCGTCGAGGTCTGGCAGCTCGAT CTCAGCTCCTTTGACAACGTCAAGGACTTTGCAAGTCGCGCCAATAAGCTCCATCGACTCGATGTGCTCATCAAT AATGCCAGCAGCCTGTTCCTGTATTACTCCAAGCACGAGGGCTACGAGACCACGATTACCGTCAACGTCATCTCG ACGCTGCTGCTCTCCATCTTGCTGCTTCCCATTCTGCGGCAGACTGGCTCACGCTTCAACAAGGGAACTCGCATT GTCATGGTCTCGTCGGGGACAGCATTCCTGCCAATTTTCCCCGAACGAAAGGCAAAGCACGTGCTCGACAAACTC AAGACAGAGTCCAGCATGCAAGAGCGCTACGCCACCAGCAAGCTCCTGCAGCTCATGATGATGCGCAAGCTTGCC GAAGCGATTGACGCGTCGCCCAAGGGCCGTGTCGTGGTCAATGCGCTCTGCCCCGGCGTGTGCAACACGGGCATC TTTCGTGACCTTTCCTCTTTCCCACTAAACGTCGTGCAGTGGATGATTGCCCACACCTGGCTTGTTCGCAGCTCG GAAACGGGATCACGCGCCCTGCTGGCGGCAGCGTTTGCGGGCGACGAGACGCATGGCGGGTGGATGATGCACTGC AAGTTGCTGCGATACTGGCCAGCGGCGATGAACGGGCCAAAGGGAGCTGAATTGACGGACAAGATTTGGGGTGAA CTGGCTGACGCGCTCGAAACGATTGAGCCTGGCGTCATGGCCCTTGTATAG |
| Gene | >OphauG2|1714 ATGTTTGGCAGTCTACCAAATCCGACAAAAGACTGCACCGGCCTCACCGTCATTGTGACGGGCTCGAATACCGGT AGGGTTAATGGCAGAGTAACAAGGCTAGTCCAAGTCTAACTGGCACCAGGCCTAGGACTGGAAGCAGCAAGACAC CTTGTGCGTCTAAATGCTGCCAAGGTGATTATTGCTTGTCGCACTGTTGAAAAGGGCGAGGCGGCTCGTCGAGAT ATCGAGGCCTCGACGCAGCGCAAGGGGATCGTCGAGGTCTGGCAGCTCGATCTCAGCTCCTTTGACAACGTCAAG GACTTTGCAAGTCGCGCCAATAAGCTCCATCGACTCGATGTGCTCATCAATAATGCCAGCAGCCTGTTCCTGTAT TACTCCAAGCACGAGGGCTACGAGACCACGATTACCGTCAACGTCATCTCGACGCTGCTGCTCTCCATCTTGCTG CTTCCCATTCTGCGGCAGACTGGCTCACGCTTCAACAAGGGAACTCGCATTGTCATGGTCTCGTCGGGGACAGCA TTCCTGGTGCGAGTCTTGCAATAGGCAAAAAAAGCTCTTGAAGAGGCTAACCCGAGATAGTGCAGCCAATTTTCC CCGAACGAAAGGCAAAGCACGTGCTCGACAAACTCAAGACAGAGTCCAGCATGCAAGAGCGCTACGCCACCAGCA AGCTCCTGCAGCTCATGATGATGCGCAAGCTTGCCGAAGCGATTGACGCGTCGCCCAAGGGCCGTGTCGTGGTCA ATGCGCTCTGCCCCGGCGTGTGCAACACGGGCATCTTTCGTGACCTTTCCTCTTTCCCACTAAACGTCGTGCAGT GGATGATTGCCCACACCTGGCTTGTTCGCAGCTCGGAAACGGGATCACGCGCCCTGCTGGCGGCAGCGTTTGCGG GCGACGAGACGCATGGCGGGTGGATGATGCACTGCAAGTTGCTGCGATACTGGCCAGCGGCGATGAACGGGCCAA AGGGAGCTGAATTGACGGACAAGATTTGGGGTGAACTGGCTGACGCGCTCGAAACGATTGAGCCTGGCGTCATGG CCCTTGTATAG |