Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauG2\|1628
Gene name
Location	Contig_150:7126..8059
Strand	-
Gene length (bp)	933
Transcript length (bp)	870
Coding sequence length (bp)	870
Protein length (aa)	290

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF04193	PQ-loop	PQ loop repeat	4.6E-15	7	65
PF04193	PQ-loop	PQ loop repeat	6.0E-14	165	221

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q9VCR7\|CTNS_DROME	Cystinosin homolog OS=Drosophila melanogaster GN=CG17119 PE=1 SV=2	4	267	1.0E-49
sp\|O60931\|CTNS_HUMAN	Cystinosin OS=Homo sapiens GN=CTNS PE=1 SV=2	6	259	1.0E-48
sp\|Q09500\|CTNS_CAEEL	Cystinosin homolog OS=Caenorhabditis elegans GN=ctns-1 PE=3 SV=2	3	279	3.0E-47
sp\|A8WN56\|CTNS_CAEBR	Cystinosin homolog OS=Caenorhabditis briggsae GN=ctns-1 PE=3 SV=1	4	280	1.0E-46
sp\|A7MB63\|CTNS_BOVIN	Cystinosin OS=Bos taurus GN=CTNS PE=2 SV=1	6	259	3.0E-46

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q9VCR7\|CTNS_DROME	Cystinosin homolog OS=Drosophila melanogaster GN=CG17119 PE=1 SV=2	4	267	1.0E-49
sp\|O60931\|CTNS_HUMAN	Cystinosin OS=Homo sapiens GN=CTNS PE=1 SV=2	6	259	1.0E-48
sp\|Q09500\|CTNS_CAEEL	Cystinosin homolog OS=Caenorhabditis elegans GN=ctns-1 PE=3 SV=2	3	279	3.0E-47
sp\|A8WN56\|CTNS_CAEBR	Cystinosin homolog OS=Caenorhabditis briggsae GN=ctns-1 PE=3 SV=1	4	280	1.0E-46
sp\|A7MB63\|CTNS_BOVIN	Cystinosin OS=Bos taurus GN=CTNS PE=2 SV=1	6	259	3.0E-46
sp\|P57757\|CTNS_MOUSE	Cystinosin OS=Mus musculus GN=Ctns PE=1 SV=1	6	259	8.0E-46
sp\|Q54WT7\|CTNS_DICDI	Cystinosin homolog OS=Dictyostelium discoideum GN=ctns PE=3 SV=1	12	256	9.0E-46
sp\|P57758\|CTNS_ARATH	Cystinosin homolog OS=Arabidopsis thaliana GN=At5g40670 PE=2 SV=1	9	274	1.0E-41
sp\|P17261\|ERS1_YEAST	Cystine transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ERS1 PE=1 SV=1	7	271	8.0E-16

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GO

(None)

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 21	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	5	24	19
2	45	67	22
3	87	106	19
4	127	149	22
5	164	186	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauG2\|1628 MDFLFLLSAICGWVYTLCWSASFYPQALLNVRRRSTSGTTIDYPFINVLGFAAYLASSAALLYSPTVRAQYAARH HGLAPTVQLNDVLFALHALVLSLITASQYFCAQSLWNFYPAPGTRPSRAMVGVATGCVLAVLATYALAAHAASSS YPLDPASAWCELDVVYAAGYAKLLITLVKYTPQVVVNARARSTVGWSISQVVLDLVGGFLSLLQLALDSYRQHDW SGVSGNPVKLALGNASMLYDSVFMVQHYVLYPHRADAHWPDVEAPLLEAPRAPDADLGRRRRLS*
Coding	>OphauG2\|1628 ATGGATTTCTTGTTTCTCCTATCAGCCATCTGTGGCTGGGTGTACACGCTATGCTGGAGCGCGTCGTTTTACCCC CAGGCGCTGCTCAACGTCCGCCGGCGTAGCACGTCGGGCACGACGATTGACTATCCCTTTATCAATGTGCTAGGC TTTGCCGCCTACTTGGCCTCGAGCGCCGCGCTGCTCTACTCCCCCACAGTGCGCGCACAGTACGCCGCTCGCCAC CACGGCCTCGCGCCCACGGTCCAGCTCAACGACGTGCTCTTTGCGCTGCACGCGCTCGTCCTCTCCCTCATCACG GCGTCGCAGTACTTTTGCGCGCAAAGCCTGTGGAACTTTTACCCGGCGCCCGGGACGCGGCCCAGCCGAGCCATG GTGGGCGTGGCGACGGGCTGCGTGCTCGCCGTGCTGGCAACCTATGCGCTCGCCGCCCACGCCGCCTCCTCCTCC TACCCCCTCGACCCCGCCTCGGCCTGGTGCGAGCTCGACGTCGTCTACGCCGCCGGCTACGCAAAACTCCTCATC ACCCTTGTCAAGTACACTCCGCAGGTCGTGGTCAATGCCCGCGCCCGCAGCACCGTCGGCTGGAGCATTAGCCAA GTCGTCCTCGACCTGGTCGGCGGCTTCCTGAGTCTGCTCCAGCTGGCCCTCGACTCATACCGCCAGCACGACTGG AGCGGCGTCTCGGGCAATCCCGTAAAACTCGCCCTCGGCAACGCGAGCATGTTGTATGATTCCGTCTTTATGGTC CAGCATTACGTGCTCTATCCCCACCGCGCAGACGCCCACTGGCCAGACGTCGAGGCCCCGTTATTGGAGGCTCCC CGCGCCCCGGATGCTGATCTTGGCCGCCGGAGGAGGCTTTCATGA
Transcript	>OphauG2\|1628 ATGGATTTCTTGTTTCTCCTATCAGCCATCTGTGGCTGGGTGTACACGCTATGCTGGAGCGCGTCGTTTTACCCC CAGGCGCTGCTCAACGTCCGCCGGCGTAGCACGTCGGGCACGACGATTGACTATCCCTTTATCAATGTGCTAGGC TTTGCCGCCTACTTGGCCTCGAGCGCCGCGCTGCTCTACTCCCCCACAGTGCGCGCACAGTACGCCGCTCGCCAC CACGGCCTCGCGCCCACGGTCCAGCTCAACGACGTGCTCTTTGCGCTGCACGCGCTCGTCCTCTCCCTCATCACG GCGTCGCAGTACTTTTGCGCGCAAAGCCTGTGGAACTTTTACCCGGCGCCCGGGACGCGGCCCAGCCGAGCCATG GTGGGCGTGGCGACGGGCTGCGTGCTCGCCGTGCTGGCAACCTATGCGCTCGCCGCCCACGCCGCCTCCTCCTCC TACCCCCTCGACCCCGCCTCGGCCTGGTGCGAGCTCGACGTCGTCTACGCCGCCGGCTACGCAAAACTCCTCATC ACCCTTGTCAAGTACACTCCGCAGGTCGTGGTCAATGCCCGCGCCCGCAGCACCGTCGGCTGGAGCATTAGCCAA GTCGTCCTCGACCTGGTCGGCGGCTTCCTGAGTCTGCTCCAGCTGGCCCTCGACTCATACCGCCAGCACGACTGG AGCGGCGTCTCGGGCAATCCCGTAAAACTCGCCCTCGGCAACGCGAGCATGTTGTATGATTCCGTCTTTATGGTC CAGCATTACGTGCTCTATCCCCACCGCGCAGACGCCCACTGGCCAGACGTCGAGGCCCCGTTATTGGAGGCTCCC CGCGCCCCGGATGCTGATCTTGGCCGCCGGAGGAGGCTTTCATGA
Gene	>OphauG2\|1628 ATGGATTTCTTGTTTCTCCTATCAGCCATCTGTGGCTGGGTGTACACGCTATGCTGGAGCGCGTCGTTTTACCCC CAGGCGCTGCTCAACGTCCGCCGGCGTAGCACGTCGGGCACGACGATTGACTATCCCTTTATCAATGTGCTAGGT TGGCCTCTCTCTCTCTCTCTCTCTCTCTCCTTTTTTTTTCTCAGCTAAAACCCGCGTCAAGGCTTTGCCGCCTAC TTGGCCTCGAGCGCCGCGCTGCTCTACTCCCCCACAGTGCGCGCACAGTACGCCGCTCGCCACCACGGCCTCGCG CCCACGGTCCAGCTCAACGACGTGCTCTTTGCGCTGCACGCGCTCGTCCTCTCCCTCATCACGGCGTCGCAGTAC TTTTGCGCGCAAAGCCTGTGGAACTTTTACCCGGCGCCCGGGACGCGGCCCAGCCGAGCCATGGTGGGCGTGGCG ACGGGCTGCGTGCTCGCCGTGCTGGCAACCTATGCGCTCGCCGCCCACGCCGCCTCCTCCTCCTACCCCCTCGAC CCCGCCTCGGCCTGGTGCGAGCTCGACGTCGTCTACGCCGCCGGCTACGCAAAACTCCTCATCACCCTTGTCAAG TACACTCCGCAGGTCGTGGTCAATGCCCGCGCCCGCAGCACCGTCGGCTGGAGCATTAGCCAAGTCGTCCTCGAC CTGGTCGGCGGCTTCCTGAGTCTGCTCCAGCTGGCCCTCGACTCATACCGCCAGCACGACTGGAGCGGCGTCTCG GGCAATCCCGTAAAACTCGCCCTCGGCAACGCGAGCATGTTGTATGATTCCGTCTTTATGGTCCAGCATTACGTG CTCTATCCCCACCGCGCAGACGCCCACTGGCCAGACGTCGAGGCCCCGTTATTGGAGGCTCCCCGCGCCCCGGAT GCTGATCTTGGCCGCCGGAGGAGGCTTTCATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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