Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauG2\|1604
Gene name
Location	Contig_15:16783..17797
Strand	+
Gene length (bp)	1014
Transcript length (bp)	1014
Coding sequence length (bp)	1014
Protein length (aa)	338

PFAM Domains

(None)

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q5R7D0\|COX18_PONAB	Mitochondrial inner membrane protein COX18 OS=Pongo abelii GN=COX18 PE=2 SV=1	53	290	2.0E-08

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 12	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	59	81	22
2	150	172	22
3	210	232	22
4	267	289	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauG2\|1604 MTPMTSLTRGLAARNAVFTTRPLPVCRKPLARRHLYQDAGIIGQSVLWTSNQLAAFHHAIGIPWFVTIPLFALVT SGLFRLPCQIMARELASRRKELQPLVIASNVYNSSRIPRDYNNGSLNAWKESVAKLTKKSQRDIYRSFGVQRYKS AVALLPAVPALIVIESLRILCGSPHSWLLVYLGLASGPQSAQSLVGSSLVDGGCLWFSDLTAMDPYFILPIFCTS LIARGVWTKLPQKTIPILLGLGDMGPISSMSARQRAFGRTMLLAPLLPLAVADLPSAIMLFWASSLAISGAMDWK LRRRFPKRGIDLTTKPKVTQFLPYIPRDHKSNPSKQK*
Coding	>OphauG2\|1604 ATGACTCCCATGACATCGCTAACCCGAGGCCTAGCGGCTAGAAATGCCGTGTTTACGACGCGCCCACTGCCCGTG TGCCGAAAGCCTCTAGCACGACGGCATCTCTATCAAGACGCGGGCATCATAGGCCAAAGCGTGTTATGGACCTCG AACCAATTGGCCGCCTTTCACCACGCGATTGGCATTCCATGGTTCGTCACGATTCCGCTCTTCGCCCTTGTTACC AGCGGTCTGTTCCGACTGCCGTGTCAAATCATGGCCCGCGAGCTGGCGAGCCGCCGCAAGGAGTTGCAGCCTCTA GTCATTGCGTCAAATGTGTACAATTCGTCCAGGATTCCCCGTGACTACAACAATGGCAGCCTGAACGCGTGGAAG GAGTCCGTCGCCAAGTTGACCAAGAAATCGCAGCGCGACATTTACAGATCCTTTGGCGTTCAGCGCTACAAGTCG GCCGTCGCTCTCCTTCCCGCGGTGCCGGCGCTAATAGTAATCGAGTCGCTGCGCATACTCTGCGGTTCGCCTCAT AGCTGGCTGTTGGTCTACCTGGGCCTGGCAAGCGGGCCTCAGAGTGCCCAGTCACTCGTCGGTTCATCTCTGGTA GACGGCGGATGCCTCTGGTTTTCCGACCTGACAGCCATGGATCCGTACTTCATCCTTCCCATCTTTTGCACGAGT CTGATTGCTCGAGGTGTATGGACCAAACTCCCGCAAAAGACGATCCCCATCTTATTGGGCTTGGGCGACATGGGG CCTATATCGTCCATGAGTGCAAGACAAAGGGCTTTTGGAAGAACAATGCTTCTAGCCCCCTTGTTACCCCTCGCC GTTGCAGACCTTCCTAGCGCAATAATGCTCTTCTGGGCCTCTAGTCTTGCCATCAGCGGAGCGATGGACTGGAAA CTACGCCGCAGATTCCCAAAGCGAGGAATCGACTTAACCACGAAGCCAAAAGTAACACAATTCTTGCCATATATC CCACGCGACCACAAGTCAAACCCTTCAAAGCAGAAATGA
Transcript	>OphauG2\|1604 ATGACTCCCATGACATCGCTAACCCGAGGCCTAGCGGCTAGAAATGCCGTGTTTACGACGCGCCCACTGCCCGTG TGCCGAAAGCCTCTAGCACGACGGCATCTCTATCAAGACGCGGGCATCATAGGCCAAAGCGTGTTATGGACCTCG AACCAATTGGCCGCCTTTCACCACGCGATTGGCATTCCATGGTTCGTCACGATTCCGCTCTTCGCCCTTGTTACC AGCGGTCTGTTCCGACTGCCGTGTCAAATCATGGCCCGCGAGCTGGCGAGCCGCCGCAAGGAGTTGCAGCCTCTA GTCATTGCGTCAAATGTGTACAATTCGTCCAGGATTCCCCGTGACTACAACAATGGCAGCCTGAACGCGTGGAAG GAGTCCGTCGCCAAGTTGACCAAGAAATCGCAGCGCGACATTTACAGATCCTTTGGCGTTCAGCGCTACAAGTCG GCCGTCGCTCTCCTTCCCGCGGTGCCGGCGCTAATAGTAATCGAGTCGCTGCGCATACTCTGCGGTTCGCCTCAT AGCTGGCTGTTGGTCTACCTGGGCCTGGCAAGCGGGCCTCAGAGTGCCCAGTCACTCGTCGGTTCATCTCTGGTA GACGGCGGATGCCTCTGGTTTTCCGACCTGACAGCCATGGATCCGTACTTCATCCTTCCCATCTTTTGCACGAGT CTGATTGCTCGAGGTGTATGGACCAAACTCCCGCAAAAGACGATCCCCATCTTATTGGGCTTGGGCGACATGGGG CCTATATCGTCCATGAGTGCAAGACAAAGGGCTTTTGGAAGAACAATGCTTCTAGCCCCCTTGTTACCCCTCGCC GTTGCAGACCTTCCTAGCGCAATAATGCTCTTCTGGGCCTCTAGTCTTGCCATCAGCGGAGCGATGGACTGGAAA CTACGCCGCAGATTCCCAAAGCGAGGAATCGACTTAACCACGAAGCCAAAAGTAACACAATTCTTGCCATATATC CCACGCGACCACAAGTCAAACCCTTCAAAGCAGAAATGA
Gene	>OphauG2\|1604 ATGACTCCCATGACATCGCTAACCCGAGGCCTAGCGGCTAGAAATGCCGTGTTTACGACGCGCCCACTGCCCGTG TGCCGAAAGCCTCTAGCACGACGGCATCTCTATCAAGACGCGGGCATCATAGGCCAAAGCGTGTTATGGACCTCG AACCAATTGGCCGCCTTTCACCACGCGATTGGCATTCCATGGTTCGTCACGATTCCGCTCTTCGCCCTTGTTACC AGCGGTCTGTTCCGACTGCCGTGTCAAATCATGGCCCGCGAGCTGGCGAGCCGCCGCAAGGAGTTGCAGCCTCTA GTCATTGCGTCAAATGTGTACAATTCGTCCAGGATTCCCCGTGACTACAACAATGGCAGCCTGAACGCGTGGAAG GAGTCCGTCGCCAAGTTGACCAAGAAATCGCAGCGCGACATTTACAGATCCTTTGGCGTTCAGCGCTACAAGTCG GCCGTCGCTCTCCTTCCCGCGGTGCCGGCGCTAATAGTAATCGAGTCGCTGCGCATACTCTGCGGTTCGCCTCAT AGCTGGCTGTTGGTCTACCTGGGCCTGGCAAGCGGGCCTCAGAGTGCCCAGTCACTCGTCGGTTCATCTCTGGTA GACGGCGGATGCCTCTGGTTTTCCGACCTGACAGCCATGGATCCGTACTTCATCCTTCCCATCTTTTGCACGAGT CTGATTGCTCGAGGTGTATGGACCAAACTCCCGCAAAAGACGATCCCCATCTTATTGGGCTTGGGCGACATGGGG CCTATATCGTCCATGAGTGCAAGACAAAGGGCTTTTGGAAGAACAATGCTTCTAGCCCCCTTGTTACCCCTCGCC GTTGCAGACCTTCCTAGCGCAATAATGCTCTTCTGGGCCTCTAGTCTTGCCATCAGCGGAGCGATGGACTGGAAA CTACGCCGCAGATTCCCAAAGCGAGGAATCGACTTAACCACGAAGCCAAAAGTAACACAATTCTTGCCATATATC CCACGCGACCACAAGTCAAACCCTTCAAAGCAGAAATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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