Protein ID | OphauG2|1489 |
Gene name | |
Location | Contig_145:10799..13403 |
Strand | + |
Gene length (bp) | 2604 |
Transcript length (bp) | 2310 |
Coding sequence length (bp) | 2310 |
Protein length (aa) | 770 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF12752 | SUZ | SUZ domain | 4.0E-13 | 352 | 417 |
PF01424 | R3H | R3H domain | 2.1E-07 | 266 | 309 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q9UBL0|ARP21_HUMAN | cAMP-regulated phosphoprotein 21 OS=Homo sapiens GN=ARPP21 PE=1 SV=2 | 251 | 478 | 1.0E-12 |
sp|Q9DCB4|ARP21_MOUSE | cAMP-regulated phosphoprotein 21 OS=Mus musculus GN=Arpp21 PE=1 SV=2 | 253 | 478 | 1.0E-11 |
sp|A0JNC2|R3HD2_BOVIN | R3H domain-containing protein 2 OS=Bos taurus GN=R3HDM2 PE=2 SV=1 | 251 | 415 | 2.0E-11 |
sp|Q15032|R3HD1_HUMAN | R3H domain-containing protein 1 OS=Homo sapiens GN=R3HDM1 PE=1 SV=3 | 251 | 466 | 3.0E-11 |
sp|Q80TM6|R3HD2_MOUSE | R3H domain-containing protein 2 OS=Mus musculus GN=R3hdm2 PE=1 SV=2 | 251 | 414 | 3.0E-11 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q9UBL0|ARP21_HUMAN | cAMP-regulated phosphoprotein 21 OS=Homo sapiens GN=ARPP21 PE=1 SV=2 | 251 | 478 | 1.0E-12 |
sp|Q9DCB4|ARP21_MOUSE | cAMP-regulated phosphoprotein 21 OS=Mus musculus GN=Arpp21 PE=1 SV=2 | 253 | 478 | 1.0E-11 |
sp|A0JNC2|R3HD2_BOVIN | R3H domain-containing protein 2 OS=Bos taurus GN=R3HDM2 PE=2 SV=1 | 251 | 415 | 2.0E-11 |
sp|Q15032|R3HD1_HUMAN | R3H domain-containing protein 1 OS=Homo sapiens GN=R3HDM1 PE=1 SV=3 | 251 | 466 | 3.0E-11 |
sp|Q80TM6|R3HD2_MOUSE | R3H domain-containing protein 2 OS=Mus musculus GN=R3hdm2 PE=1 SV=2 | 251 | 414 | 3.0E-11 |
sp|Q9Y2K5|R3HD2_HUMAN | R3H domain-containing protein 2 OS=Homo sapiens GN=R3HDM2 PE=1 SV=3 | 251 | 329 | 5.0E-10 |
GO Term | Description | Terminal node |
---|---|---|
GO:0003676 | nucleic acid binding | Yes |
GO:0003674 | molecular_function | No |
GO:1901363 | heterocyclic compound binding | No |
GO:0005488 | binding | No |
GO:0097159 | organic cyclic compound binding | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >OphauG2|1489 MASTQLSPDNSRPSFAKVAAAVSNETVSDKSPTDKPPSQPIMVTPMVVSSASVQPRQLKSEKPSPAPVDRLTASL NYVKLEPRIPNLVVNGTCCGSALERQRALLSRECGSDESQRCDSSSELGTKPPSLDGKSITSGTTFAMDEKESLR PDDSASVKAAAEDDDVFSVRGSLIAASRISSDIAVRARGIQLGDMPERRPVQKPLEVPEQGALTPQSPSSDQPPI VNTTMPLGTDTVSDALNVIYRQAPDEKLLDALASPRDRYYLLRLEKDVIEFVQDSKEPYMDLPPSNSFCRMLTHK LADYYHMTHSFEPNIGSVRIFRTPFCRVPPSLATMTPQPSVSTSSTPPPAVLPMKIMRRGQPQEIEAVGADVSKP TSESGSDGKEGKEKQPIPKEKLSREEREEMYKLARERIFGSSDASIQESEAEIDMSRTSSMSATNRANVGKRGKT GKQRRDDSDSFDSRNQYTPYWGPQQQTWVAQPQGCQFMPAAPGQFESQSQPPYSGPMTSGYGHQPPGFSAATGAA GPQGPMYNAYCMPQYQAQQPPPPRFPSPMPAYGPSASQTPSSTPQSWQPGYTQPAYQARGPTAPPCHSHNGIPYP FGQLPANANPHDPKSQHPIPGSYNRNHSFNPMTQSFVPGANGVHATQLPQPPFTAPGSHHSSPQITTSHAAYNGY QTPAGQPYSGGYNMARQGSSNSIPPYHGPPGAQHALPPTVPSFPQGLPQHTHLPTPPAHIPSRPAVPQGPSQMYS HLPTYGNPATLPQKPATGV* |
Coding | >OphauG2|1489 ATGGCCTCTACTCAGCTGTCTCCGGACAATTCACGCCCTTCCTTCGCAAAGGTAGCCGCCGCAGTCTCCAACGAG ACTGTATCAGACAAATCTCCCACCGACAAGCCACCTAGTCAGCCCATCATGGTTACGCCCATGGTTGTCAGCAGC GCCTCGGTCCAACCACGACAGCTCAAATCAGAAAAACCAAGCCCCGCTCCAGTGGACCGTTTGACCGCGTCGCTT AATTATGTGAAACTCGAACCTAGAATCCCCAACCTTGTGGTTAATGGCACATGTTGTGGCTCTGCGTTGGAGCGG CAACGGGCATTGTTGAGCAGAGAGTGTGGCTCTGATGAATCTCAGAGATGCGACTCGAGCTCTGAGCTGGGAACC AAGCCCCCAAGCTTGGATGGCAAGAGTATAACGTCTGGAACTACCTTTGCCATGGATGAAAAGGAATCACTCCGC CCTGATGACAGCGCCAGCGTCAAGGCAGCCGCTGAGGACGACGATGTGTTTTCAGTGCGAGGCTCTTTGATAGCT GCCTCGCGCATAAGCTCGGATATTGCAGTCAGGGCCCGCGGCATTCAGCTTGGGGACATGCCCGAACGAAGACCT GTGCAAAAACCCCTTGAAGTTCCGGAGCAGGGCGCTTTGACACCACAGAGCCCCTCTTCCGACCAGCCTCCCATC GTCAATACCACCATGCCTCTTGGTACAGATACCGTCTCGGATGCCCTTAACGTCATCTATCGACAAGCTCCAGAC GAGAAACTGCTTGATGCGTTGGCAAGTCCCAGGGACAGGTACTATTTGTTAAGATTAGAAAAGGATGTCATTGAA TTCGTACAAGACTCAAAGGAACCATACATGGATTTGCCACCCTCAAACTCGTTTTGCAGGATGTTGACGCACAAA TTGGCCGACTATTACCATATGACGCATTCGTTTGAGCCAAATATTGGCTCTGTCCGTATTTTCAGAACGCCCTTT TGCCGAGTTCCTCCATCGCTGGCCACCATGACACCGCAACCCAGTGTTTCTACTAGCAGCACGCCGCCTCCTGCT GTTCTCCCCATGAAAATAATGCGTAGAGGACAGCCCCAAGAAATAGAGGCTGTTGGCGCCGATGTTTCGAAGCCG ACATCAGAGTCAGGCAGCGACGGCAAGGAAGGGAAAGAGAAGCAGCCCATACCCAAGGAGAAGCTTTCACGGGAA GAGAGGGAAGAAATGTACAAGTTGGCACGGGAACGCATTTTCGGAAGCTCTGATGCTAGCATACAGGAATCGGAA GCTGAAATTGACATGTCCCGGACCAGCTCCATGTCGGCTACTAATAGAGCAAACGTTGGGAAACGCGGCAAGACT GGCAAGCAACGGCGTGATGATTCGGACAGCTTTGACAGCAGAAATCAGTATACCCCTTATTGGGGTCCGCAGCAA CAGACTTGGGTTGCTCAGCCTCAAGGGTGCCAGTTTATGCCCGCCGCTCCCGGGCAATTTGAGTCTCAGAGTCAA CCACCATATTCGGGTCCAATGACCTCTGGTTATGGCCACCAACCACCTGGCTTCTCAGCAGCCACAGGAGCTGCT GGACCACAAGGCCCCATGTATAATGCATATTGCATGCCACAGTATCAGGCGCAACAACCGCCTCCGCCAAGGTTC CCCAGTCCAATGCCGGCCTATGGTCCATCGGCTTCGCAAACTCCGTCATCTACACCACAATCGTGGCAGCCAGGC TATACTCAGCCCGCATACCAGGCAAGAGGGCCCACTGCTCCTCCATGCCATTCTCACAACGGAATTCCATATCCG TTTGGCCAGCTCCCGGCTAATGCGAACCCCCACGATCCAAAGAGCCAACACCCTATACCTGGGAGCTACAATAGG AACCATTCTTTCAATCCCATGACGCAATCATTCGTCCCCGGCGCAAATGGAGTGCATGCAACTCAACTACCGCAG CCCCCATTTACCGCCCCAGGATCCCATCACAGCAGCCCACAAATCACAACGTCACACGCTGCTTATAATGGCTAT CAGACACCGGCTGGCCAGCCATACAGTGGCGGATACAACATGGCTAGGCAAGGCTCTAGTAACTCGATTCCTCCT TATCATGGGCCCCCTGGTGCTCAGCACGCTCTGCCGCCTACAGTGCCGAGTTTCCCTCAAGGGCTGCCACAACAT ACCCATCTGCCGACTCCCCCTGCGCACATCCCCAGTCGCCCCGCCGTGCCTCAAGGCCCGAGTCAGATGTACAGT CACTTACCCACATACGGCAATCCGGCAACGTTGCCACAAAAGCCAGCCACAGGTGTTTAG |
Transcript | >OphauG2|1489 ATGGCCTCTACTCAGCTGTCTCCGGACAATTCACGCCCTTCCTTCGCAAAGGTAGCCGCCGCAGTCTCCAACGAG ACTGTATCAGACAAATCTCCCACCGACAAGCCACCTAGTCAGCCCATCATGGTTACGCCCATGGTTGTCAGCAGC GCCTCGGTCCAACCACGACAGCTCAAATCAGAAAAACCAAGCCCCGCTCCAGTGGACCGTTTGACCGCGTCGCTT AATTATGTGAAACTCGAACCTAGAATCCCCAACCTTGTGGTTAATGGCACATGTTGTGGCTCTGCGTTGGAGCGG CAACGGGCATTGTTGAGCAGAGAGTGTGGCTCTGATGAATCTCAGAGATGCGACTCGAGCTCTGAGCTGGGAACC AAGCCCCCAAGCTTGGATGGCAAGAGTATAACGTCTGGAACTACCTTTGCCATGGATGAAAAGGAATCACTCCGC CCTGATGACAGCGCCAGCGTCAAGGCAGCCGCTGAGGACGACGATGTGTTTTCAGTGCGAGGCTCTTTGATAGCT GCCTCGCGCATAAGCTCGGATATTGCAGTCAGGGCCCGCGGCATTCAGCTTGGGGACATGCCCGAACGAAGACCT GTGCAAAAACCCCTTGAAGTTCCGGAGCAGGGCGCTTTGACACCACAGAGCCCCTCTTCCGACCAGCCTCCCATC GTCAATACCACCATGCCTCTTGGTACAGATACCGTCTCGGATGCCCTTAACGTCATCTATCGACAAGCTCCAGAC GAGAAACTGCTTGATGCGTTGGCAAGTCCCAGGGACAGGTACTATTTGTTAAGATTAGAAAAGGATGTCATTGAA TTCGTACAAGACTCAAAGGAACCATACATGGATTTGCCACCCTCAAACTCGTTTTGCAGGATGTTGACGCACAAA TTGGCCGACTATTACCATATGACGCATTCGTTTGAGCCAAATATTGGCTCTGTCCGTATTTTCAGAACGCCCTTT TGCCGAGTTCCTCCATCGCTGGCCACCATGACACCGCAACCCAGTGTTTCTACTAGCAGCACGCCGCCTCCTGCT GTTCTCCCCATGAAAATAATGCGTAGAGGACAGCCCCAAGAAATAGAGGCTGTTGGCGCCGATGTTTCGAAGCCG ACATCAGAGTCAGGCAGCGACGGCAAGGAAGGGAAAGAGAAGCAGCCCATACCCAAGGAGAAGCTTTCACGGGAA GAGAGGGAAGAAATGTACAAGTTGGCACGGGAACGCATTTTCGGAAGCTCTGATGCTAGCATACAGGAATCGGAA GCTGAAATTGACATGTCCCGGACCAGCTCCATGTCGGCTACTAATAGAGCAAACGTTGGGAAACGCGGCAAGACT GGCAAGCAACGGCGTGATGATTCGGACAGCTTTGACAGCAGAAATCAGTATACCCCTTATTGGGGTCCGCAGCAA CAGACTTGGGTTGCTCAGCCTCAAGGGTGCCAGTTTATGCCCGCCGCTCCCGGGCAATTTGAGTCTCAGAGTCAA CCACCATATTCGGGTCCAATGACCTCTGGTTATGGCCACCAACCACCTGGCTTCTCAGCAGCCACAGGAGCTGCT GGACCACAAGGCCCCATGTATAATGCATATTGCATGCCACAGTATCAGGCGCAACAACCGCCTCCGCCAAGGTTC CCCAGTCCAATGCCGGCCTATGGTCCATCGGCTTCGCAAACTCCGTCATCTACACCACAATCGTGGCAGCCAGGC TATACTCAGCCCGCATACCAGGCAAGAGGGCCCACTGCTCCTCCATGCCATTCTCACAACGGAATTCCATATCCG TTTGGCCAGCTCCCGGCTAATGCGAACCCCCACGATCCAAAGAGCCAACACCCTATACCTGGGAGCTACAATAGG AACCATTCTTTCAATCCCATGACGCAATCATTCGTCCCCGGCGCAAATGGAGTGCATGCAACTCAACTACCGCAG CCCCCATTTACCGCCCCAGGATCCCATCACAGCAGCCCACAAATCACAACGTCACACGCTGCTTATAATGGCTAT CAGACACCGGCTGGCCAGCCATACAGTGGCGGATACAACATGGCTAGGCAAGGCTCTAGTAACTCGATTCCTCCT TATCATGGGCCCCCTGGTGCTCAGCACGCTCTGCCGCCTACAGTGCCGAGTTTCCCTCAAGGGCTGCCACAACAT ACCCATCTGCCGACTCCCCCTGCGCACATCCCCAGTCGCCCCGCCGTGCCTCAAGGCCCGAGTCAGATGTACAGT CACTTACCCACATACGGCAATCCGGCAACGTTGCCACAAAAGCCAGCCACAGGTGTTTAG |
Gene | >OphauG2|1489 ATGGCCTCTACTCAGCTGTCTCCGGACAATTCACGCCCTTCCTTCGCAAAGGTATCTCTCCCTTGGCCACCCCTT TCCTTGTACTAAGATTTGCTTATTCCCCTCCCTCCCTTGAATAGGTAGCCGCCGCAGTCTCCAACGAGACTGTAT CAGACAAATCTCCCACCGACAAGCCACCTAGTCAGCCCATCATGGTTACGCCCATGGTTGTCAGCAGCGCCTCGG TCCAACCACGACAGCTCAAATCAGAAAAACCAAGCCCCGCTCCAGTGGACCGTTTGACCGCGTCGCTTAATTATG TGAAACTCGAACCTAGAATCCCCAACCTTGTGGTTAATGGCACATGTTGTGGCTCTGCGTTGGAGCGGCAACGGG CATTGTTGAGCAGAGAGTGTGGCTCTGATGAATCTCAGAGATGCGACTCGAGCTCTGAGCTGGGAACCAAGCCCC CAAGCTTGGATGGCAAGAGTATAACGTCTGGAACTACCTTTGCCATGGATGAAAAGGAATCACTCCGCCCTGATG ACAGCGCCAGCGTCAAGGCAGCCGCTGAGGACGACGATGTGTTTTCAGTGCGAGGCTCTTTGATAGCTGCCTCGC GCATAAGCTCGGATATTGCAGTCAGGGCCCGCGGCATTCAGCTTGGGGACATGCCCGAACGAAGACCTGTGCAAA AACCCCTTGAAGTTCCGGAGCAGGGCGCTTTGACACCACAGAGCCCCTCTTCCGACCAGCCTCCCATCGTCAATA CCACCATGCCTCTTGGTACAGATACCGTCTCGGATGCCCTTAACGTCATCTATCGACAAGCTCCAGACGAGAAAC TGCTTGATGCGTTGGCAAGTCCCAGGGACAGGTACTATTTGTTAAGATTAGAAAAGGATGTCATTGAATTCGTAC AAGACTCAAAGTAAGTACCTGTTTTGTCTATCAAAACACATTCTACATGTGCTCACTTTACCAGGGAACCATACA TGGATTTGCCACCCTCAAACTCGTTTTGCAGGATGTTGACGCACAAATTGGCCGACTATTACCATATGACGCATT CGTTTGAGCCAAATATTGGCTCTGTCCGTATTTTCAGAACGCCCTTTTGCCGAGTTCCTCCATCGCTGGCCACCA TGACACCGCAACCCAGTGTTTCTACTAGCAGCACGCCGCCTCCTGCTGTTCTCCCCATGAAAATAATGCGTAGAG GACAGCCCCAAGAAATAGAGGCTGTTGGCGCCGATGTTTCGAAGCCGACATCAGAGTCAGGCAGCGACGGCAAGG AAGGGAAAGAGAAGCAGCCCATACCCAAGGAGAAGTAAGTATTGCCCAACGGAATCAATTTCTAACACACTCTAA TACCACTGTCTCCAGGCTTTCACGGGAAGAGAGGGAAGAAATGTACAAGTTGGCACGGGAACGCATTTTCGGAAG CTCTGATGCTAGCATACAGGGTAAAGCATCCGTGCTTGTGTTTAAATGTTGCTTCTAATCTTGATTGGCTAACTT GCATGCAGAATCGGAAGCTGAAATTGACATGTCCCGGACCAGCTCCATGTCGGCTACTAATAGAGCAAACGTTGG GAAACGCGGCAAGACTGGCAAGCAACGGCGTGATGATTCGGACAGCTTTGACAGCAGAAATCAGTATACCCCTTA TTGGGGTCCGCAGCAACAGACTTGGGTTGCTCAGCCTCAAGGGTGCCAGTTTATGCCCGCCGCTCCCGGGCAATT TGAGTCTCAGAGTCAACCACCATATTCGGGTCCAATGACCTCTGGTTATGGCCACCAACCACCTGGCTTCTCAGC AGCCACAGGAGCTGCTGGACCACAAGGCCCCATGTATAATGCATATTGCATGCCACAGGTCAGTCAAAGTTAACA GAGAGTCTAAAGTTAAAGGCTGACGCAAAGAGAAAGTATCAGGCGCAACAACCGCCTCCGCCAAGGTTCCCCAGT CCAATGCCGGCCTATGGTCCATCGGCTTCGCAAACTCCGTCATCTACACCACAATCGTGGCAGCCAGGCTATACT CAGCCCGCATACCAGGCAAGAGGGCCCACTGCTCCTCCATGCCATTCTCACAACGGAATTCCATATCCGTTTGGC CAGCTCCCGGCTAATGCGAACCCCCACGATCCAAAGAGCCAACACCCTATACCTGGGAGCTACAATAGGAACCAT TCTTTCAATCCCATGACGCAATCATTCGTCCCCGGCGCAAATGGAGTGCATGCAACTCAACTACCGCAGCCCCCA TTTACCGCCCCAGGATCCCATCACAGCAGCCCACAAATCACAACGTCACACGCTGCTTATAATGGCTATCAGACA CCGGCTGGCCAGCCATACAGTGGCGGATACAACATGGCTAGGCAAGGCTCTAGTAACTCGATTCCTCCTTATCAT GGGCCCCCTGGTGCTCAGCACGCTCTGCCGCCTACAGTGCCGAGTTTCCCTCAAGGGCTGCCACAACATACCCAT CTGCCGACTCCCCCTGCGCACATCCCCAGTCGCCCCGCCGTGCCTCAAGGCCCGAGTCAGATGTACAGTCACTTA CCCACATACGGCAATCCGGCAACGTTGCCACAAAAGCCAGCCACAGGTGTTTAG |