Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|1472
Gene name
LocationContig_1443:2695..3122
Strand-
Gene length (bp)427
Transcript length (bp)273
Coding sequence length (bp)273
Protein length (aa) 91

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05730 CFEM CFEM domain 3.0E-15 20 84

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q4WMA6|CFMB_ASPFU GPI-anchored CFEM domain protein B OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=cfmB PE=3 SV=1 1 90 2.0E-12
sp|D4B2Q8|CFMB_ARTBC GPI-anchored CFEM domain protein ARB_02741 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02741 PE=1 SV=1 1 90 8.0E-12

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 18 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|1472
MHFTAAIVAFCAIAVSAQDLSNLPMCAQPCFKEKFSLSGCKDQSDYACLCQSKDYLNAVTDCVMGDCPIPDALAT
RQWAADKCKAAGHPI*
Coding >OphauG2|1472
ATGCATTTTACCGCAGCCATCGTCGCCTTCTGCGCCATTGCAGTCTCAGCTCAGGATCTCAGTAACCTTCCCATG
TGCGCTCAGCCATGCTTCAAGGAAAAATTCTCCTTGTCCGGGTGTAAGGACCAGAGCGATTATGCCTGTCTCTGC
CAGTCCAAAGATTACCTCAACGCCGTCACTGACTGCGTCATGGGAGACTGTCCCATACCGGACGCCCTCGCCACT
CGCCAATGGGCGGCTGACAAGTGCAAGGCCGCTGGTCATCCTATCTAG
Transcript >OphauG2|1472
ATGCATTTTACCGCAGCCATCGTCGCCTTCTGCGCCATTGCAGTCTCAGCTCAGGATCTCAGTAACCTTCCCATG
TGCGCTCAGCCATGCTTCAAGGAAAAATTCTCCTTGTCCGGGTGTAAGGACCAGAGCGATTATGCCTGTCTCTGC
CAGTCCAAAGATTACCTCAACGCCGTCACTGACTGCGTCATGGGAGACTGTCCCATACCGGACGCCCTCGCCACT
CGCCAATGGGCGGCTGACAAGTGCAAGGCCGCTGGTCATCCTATCTAG
Gene >OphauG2|1472
ATGCATTTTACCGCAGCCATCGTCGCCTTCTGCGCCATTGCAGTCTCAGCTCAGGATCTCAGTAACCTTCCCATG
TGCGCTCAGCCATGCTTCAAGGAAAAATTCTCCTTGTCCGGGTGTAAGGACCAGAGCGATTATGCCTGTCTCTGC
CAGTATGTTTTATCCCACCCGATTCTAACCTTTTGGGGGTGGTTTGGGCTCAAGAATCGCTGCAAAGCCTATAAA
CATGTTGACAATTCCTGCCAGGTCCAAAGATTACCTCAACGCCGTCACTGACTGCGTCATGGGAGACTGTCCCAT
ACCGGACGCGTAAGTTCCCACCCCATGGTCTTCAAGACTTTCGGAAAGTAGACTGATCTTGGTTTACAGCCTCGC
CACTCGCCAATGGGCGGCTGACAAGTGCAAGGCCGCTGGTCATCCTATCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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