Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauG2\|145
Gene name
Location	Contig_102:12768..13336
Strand	+
Gene length (bp)	568
Transcript length (bp)	504
Coding sequence length (bp)	504
Protein length (aa)	168

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF05730	CFEM	CFEM domain	5.7E-08	63	127

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 19	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	7	29	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauG2\|145 MKWLGLVFLVAMTTIVSALSIPSPPAIWTYGPNKNFTREWRKHPGSSKRPNPPTEKTRTPDFSEIDPAAFECLTM AIRYHTNCRITDIKCACDNAQTLRKTAKKCILEKCGFIKALRVASQLKKICKKEGVDWDEVEKEAKKRDKESKKA AKKLEKIREKMLIREIV*
Coding	>OphauG2\|145 ATGAAGTGGCTTGGACTTGTCTTTTTGGTGGCCATGACTACCATCGTGTCTGCCTTGTCGATACCAAGCCCACCA GCAATTTGGACGTACGGGCCAAATAAGAACTTCACAAGAGAATGGAGAAAGCACCCGGGGTCTAGCAAACGGCCC AACCCCCCTACTGAGAAGACACGAACTCCGGATTTTTCCGAGATTGATCCGGCCGCCTTCGAGTGCTTGACGATG GCGATTCGCTACCACACAAATTGCAGGATTACCGACATCAAATGTGCATGCGATAACGCACAAACCCTTCGAAAA ACGGCAAAGAAATGCATTTTGGAAAAGTGTGGCTTCATCAAAGCCTTGCGTGTCGCATCTCAGCTCAAGAAGATA TGCAAAAAAGAGGGCGTCGACTGGGACGAGGTTGAAAAGGAGGCAAAAAAGAGGGACAAGGAGTCGAAAAAGGCG GCCAAGAAGTTGGAAAAAATAAGGGAGAAGATGCTCATCAGGGAGATAGTGTAG
Transcript	>OphauG2\|145 ATGAAGTGGCTTGGACTTGTCTTTTTGGTGGCCATGACTACCATCGTGTCTGCCTTGTCGATACCAAGCCCACCA GCAATTTGGACGTACGGGCCAAATAAGAACTTCACAAGAGAATGGAGAAAGCACCCGGGGTCTAGCAAACGGCCC AACCCCCCTACTGAGAAGACACGAACTCCGGATTTTTCCGAGATTGATCCGGCCGCCTTCGAGTGCTTGACGATG GCGATTCGCTACCACACAAATTGCAGGATTACCGACATCAAATGTGCATGCGATAACGCACAAACCCTTCGAAAA ACGGCAAAGAAATGCATTTTGGAAAAGTGTGGCTTCATCAAAGCCTTGCGTGTCGCATCTCAGCTCAAGAAGATA TGCAAAAAAGAGGGCGTCGACTGGGACGAGGTTGAAAAGGAGGCAAAAAAGAGGGACAAGGAGTCGAAAAAGGCG GCCAAGAAGTTGGAAAAAATAAGGGAGAAGATGCTCATCAGGGAGATAGTGTAG
Gene	>OphauG2\|145 ATGAAGTGGCTTGGACTTGTCTTTTTGGTGGCCATGACTACCATCGTGTCTGCCTTGTCGATACCAAGCCCACCA GCAATTTGGACGTACGGGCCAAATAAGAACTTCACAAGAGAATGGAGAAAGCACCCGGGGTCTAGCAAACGGCCC AACCCCCCTACTGAGAAGACACGAACTCCGGATTTTTCCGAGATTGATCCGGCCGCCTTCGAGTGCTTGACGATG GCGATTCGCTACCACACAAATTGCAGGATTACCGACATCAAATGTGCATGCGATAACGCACAAACCCTTCGAAAA ACGGCAAAGAAATGCATTTTGGAAAAGTGTGGCTTCATCAAAGCCTTGCGTGAGTCTTGTTGAACCATGGTGCAT GCAGCTGTGTCGGACATGATACTAACGTGGCATCGCAGGTGTCGCATCTCAGCTCAAGAAGATATGCAAAAAAGA GGGCGTCGACTGGGACGAGGTTGAAAAGGAGGCAAAAAAGAGGGACAAGGAGTCGAAAAAGGCGGCCAAGAAGTT GGAAAAAATAAGGGAGAAGATGCTCATCAGGGAGATAGTGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail