Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|1436
Gene name
LocationContig_143:13075..14019
Strand+
Gene length (bp)944
Transcript length (bp)831
Coding sequence length (bp)831
Protein length (aa) 277

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13085 Fer2_3 2Fe-2S iron-sulfur cluster binding domain 7.3E-33 45 150
PF13534 Fer4_17 4Fe-4S dicluster domain 2.7E-09 187 260
PF13237 Fer4_10 4Fe-4S dicluster domain 8.9E-08 187 256
PF13183 Fer4_8 4Fe-4S dicluster domain 3.5E-07 185 258

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|O42772|SDHB_ZYMTR Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Zymoseptoria tritici GN=SDH2 PE=3 SV=1 22 274 2.0E-143
sp|P32420|SDHB_USTMA Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Ustilago maydis (strain 521 / FGSC 9021) GN=SDH2 PE=3 SV=1 3 276 8.0E-136
sp|Q75CI4|SDHB_ASHGO Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=SDH2 PE=3 SV=1 14 274 1.0E-134
sp|Q6FWS8|SDHB_CANGA Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=SDH2 PE=3 SV=1 35 274 7.0E-131
sp|P21801|SDHB_YEAST Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SDH2 PE=1 SV=1 23 275 7.0E-130
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Swissprot ID Swissprot Description Start End E-value
sp|O42772|SDHB_ZYMTR Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Zymoseptoria tritici GN=SDH2 PE=3 SV=1 22 274 2.0E-143
sp|P32420|SDHB_USTMA Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Ustilago maydis (strain 521 / FGSC 9021) GN=SDH2 PE=3 SV=1 3 276 8.0E-136
sp|Q75CI4|SDHB_ASHGO Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=SDH2 PE=3 SV=1 14 274 1.0E-134
sp|Q6FWS8|SDHB_CANGA Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=SDH2 PE=3 SV=1 35 274 7.0E-131
sp|P21801|SDHB_YEAST Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SDH2 PE=1 SV=1 23 275 7.0E-130
sp|Q70KF8|SDHB_UROFA Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Uromyces fabae GN=SDH2 PE=3 SV=1 29 273 2.0E-129
sp|P21911|SDHB_SCHPO Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sdh2 PE=3 SV=3 28 273 1.0E-128
sp|Q3B8J8|SDHB_XENLA Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Xenopus laevis GN=sdhb PE=2 SV=1 22 274 1.0E-128
sp|A5PL98|SDHB_DANRE Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Danio rerio GN=sdhb PE=2 SV=1 19 273 2.0E-126
sp|Q9YHT2|SDHB_CHICK Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Gallus gallus GN=SDHB PE=1 SV=1 37 273 2.0E-126
sp|B0BM36|SDHB_XENTR Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Xenopus tropicalis GN=sdhb PE=2 SV=1 42 273 2.0E-126
sp|P21913|SDHB_RAT Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Rattus norvegicus GN=Sdhb PE=2 SV=2 41 273 5.0E-126
sp|P21914|SDHB_DROME Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Drosophila melanogaster GN=SdhB PE=2 SV=2 22 273 6.0E-125
sp|Q9CQA3|SDHB_MOUSE Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Mus musculus GN=Sdhb PE=1 SV=1 21 273 3.0E-124
sp|P21912|SDHB_HUMAN Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Homo sapiens GN=SDHB PE=1 SV=3 37 273 3.0E-124
sp|Q3T189|SDHB_BOVIN Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Bos taurus GN=SDHB PE=2 SV=1 41 273 2.0E-123
sp|Q007T0|SDHB_PIG Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Sus scrofa GN=SDHB PE=1 SV=1 37 273 5.0E-122
sp|Q1RGP3|SDHB_RICBR Succinate dehydrogenase iron-sulfur subunit OS=Rickettsia bellii (strain RML369-C) GN=sdhB PE=3 SV=1 42 273 8.0E-119
sp|Q8LB02|SDHB2_ARATH Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial OS=Arabidopsis thaliana GN=SDH2-2 PE=1 SV=2 26 275 7.0E-117
sp|Q4UN71|SDHB_RICFE Succinate dehydrogenase iron-sulfur subunit OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) GN=sdhB PE=3 SV=1 44 273 2.0E-116
sp|Q9ZEA1|SDHB_RICPR Succinate dehydrogenase iron-sulfur subunit OS=Rickettsia prowazekii (strain Madrid E) GN=sdhB PE=3 SV=1 38 273 6.0E-116
sp|Q59662|SDHB_PARDE Succinate dehydrogenase iron-sulfur subunit OS=Paracoccus denitrificans GN=sdhB PE=3 SV=1 42 273 1.0E-115
sp|Q8LBZ7|SDHB1_ARATH Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial OS=Arabidopsis thaliana GN=SDH2-1 PE=1 SV=2 42 270 1.0E-115
sp|Q92JJ8|SDHB_RICCN Succinate dehydrogenase iron-sulfur subunit OS=Rickettsia conorii (strain ATCC VR-613 / Malish 7) GN=sdhB PE=3 SV=1 44 273 1.0E-115
sp|Q68XS0|SDHB_RICTY Succinate dehydrogenase iron-sulfur subunit OS=Rickettsia typhi (strain ATCC VR-144 / Wilmington) GN=sdhB PE=3 SV=1 38 273 1.0E-114
sp|Q09545|SDHB_CAEEL Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Caenorhabditis elegans GN=sdhb-1 PE=2 SV=1 28 272 7.0E-114
sp|A8WPF0|SDHB_CAEBR Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Caenorhabditis briggsae GN=sdhb-1 PE=3 SV=2 36 269 5.0E-113
sp|P80480|SDHB_RECAM Succinate dehydrogenase [ubiquinone] iron-sulfur subunit OS=Reclinomonas americana GN=SDH2 PE=3 SV=1 39 274 1.0E-112
sp|Q9S827|SDHB1_ORYSJ Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial OS=Oryza sativa subsp. japonica GN=SDH2-1 PE=1 SV=1 44 270 3.0E-106
sp|Q55CC2|SDHB_DICDI Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Dictyostelium discoideum GN=sdhB PE=3 SV=1 9 273 1.0E-105
sp|Q9FJP9|SDHB3_ARATH Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochondrial OS=Arabidopsis thaliana GN=SDH2-3 PE=1 SV=1 17 271 9.0E-105
sp|P48933|SDHB_CYACA Succinate dehydrogenase [ubiquinone] iron-sulfur subunit OS=Cyanidium caldarium GN=SDH2 PE=3 SV=1 43 272 6.0E-100
sp|P48932|SDHB_CHOCR Succinate dehydrogenase [ubiquinone] iron-sulfur subunit OS=Chondrus crispus GN=SDH2 PE=3 SV=1 41 272 2.0E-99
sp|P80477|SDHB_PORPU Succinate dehydrogenase [ubiquinone] iron-sulfur subunit OS=Porphyra purpurea GN=SDH2 PE=3 SV=1 36 272 7.0E-97
sp|Q6H4G3|SDHB2_ORYSJ Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial OS=Oryza sativa subsp. japonica GN=SDH2-2 PE=1 SV=1 43 275 1.0E-91
sp|P07014|SDHB_ECOLI Succinate dehydrogenase iron-sulfur subunit OS=Escherichia coli (strain K12) GN=sdhB PE=1 SV=1 46 272 7.0E-82
sp|Q8ZQU2|SDHB_SALTY Succinate dehydrogenase iron-sulfur subunit OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=sdhB PE=3 SV=2 46 272 5.0E-81
sp|P51053|SDHB_COXBU Succinate dehydrogenase iron-sulfur subunit OS=Coxiella burnetii (strain RSA 493 / Nine Mile phase I) GN=sdhB PE=3 SV=1 45 272 2.0E-66
sp|P44893|FRDB_HAEIN Fumarate reductase iron-sulfur subunit OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=frdB PE=3 SV=1 45 273 2.0E-39
sp|P9WN88|FRDB_MYCTO Fumarate reductase iron-sulfur subunit OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=frdB PE=3 SV=1 45 276 8.0E-39
sp|P9WN89|FRDB_MYCTU Fumarate reductase iron-sulfur subunit OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=frdB PE=1 SV=1 45 276 8.0E-39
sp|P0AC50|FRDB_SHIFL Fumarate reductase iron-sulfur subunit OS=Shigella flexneri GN=frdB PE=3 SV=2 42 271 7.0E-36
sp|P0AC47|FRDB_ECOLI Fumarate reductase iron-sulfur subunit OS=Escherichia coli (strain K12) GN=frdB PE=1 SV=2 42 271 7.0E-36
sp|P0AC48|FRDB_ECOL6 Fumarate reductase iron-sulfur subunit OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=frdB PE=3 SV=2 42 271 7.0E-36
sp|P0AC49|FRDB_ECO57 Fumarate reductase iron-sulfur subunit OS=Escherichia coli O157:H7 GN=frdB PE=3 SV=2 42 271 7.0E-36
sp|P20921|FRDB_PROVU Fumarate reductase iron-sulfur subunit OS=Proteus vulgaris GN=frdB PE=3 SV=2 46 273 2.0E-35
sp|P17596|FRDB_WOLSU Fumarate reductase iron-sulfur subunit OS=Wolinella succinogenes (strain ATCC 29543 / DSM 1740 / LMG 7466 / NCTC 11488 / FDC 602W) GN=frdB PE=1 SV=1 42 273 4.0E-26
sp|D9PUX5|TFRB_METTM Fumarate reductase (CoM/CoB) subunit B OS=Methanothermobacter marburgensis (strain DSM 2133 / 14651 / NBRC 100331 / OCM 82 / Marburg) GN=tfrB PE=1 SV=1 43 269 2.0E-25
sp|O06914|FRDB_HELPY Fumarate reductase iron-sulfur subunit OS=Helicobacter pylori (strain ATCC 700392 / 26695) GN=frdB PE=3 SV=2 47 272 1.0E-22
sp|Q9ZMP1|FRDB_HELPJ Fumarate reductase iron-sulfur subunit OS=Helicobacter pylori (strain J99 / ATCC 700824) GN=frdB PE=3 SV=1 47 272 2.0E-22
sp|Q57557|Y092_METJA Uncharacterized iron-sulfur protein MJ0092 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0092 PE=3 SV=1 43 260 2.0E-22
sp|Q6LYC4|Y1067_METMP Uncharacterized iron-sulfur protein MMP1067 OS=Methanococcus maripaludis (strain S2 / LL) GN=MMP1067 PE=3 SV=1 62 260 3.0E-21
sp|P08066|SDHB_BACSU Succinate dehydrogenase iron-sulfur subunit OS=Bacillus subtilis (strain 168) GN=sdhB PE=3 SV=3 81 276 1.0E-16
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GO

GO Term Description Terminal node
GO:0009055 electron transfer activity Yes
GO:0051536 iron-sulfur cluster binding Yes
GO:0003674 molecular_function No
GO:0016491 oxidoreductase activity No
GO:0003824 catalytic activity No
GO:0005488 binding No
GO:0051540 metal cluster binding No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup3836
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|1436 (this protein)
Ophiocordyceps australis map64 (Brazil) OphauB2|6038
Ophiocordyceps camponoti-floridani Ophcf2|06404
Ophiocordyceps camponoti-rufipedis Ophun1|3484
Ophiocordyceps kimflemingae Ophio5|6405
Ophiocordyceps subramaniannii Hirsu2|7545

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|1436
MAALRSSARALASIRANPHRPALVLARSMASVSDAPAQKQPQMKTFQIYRWNPDSPDEKPRLQSYTLDLNKTGPM
VLDALIRIKNELDPTLTFRRSCREGICGSCAMNINGQNTLACLCRIPEASTDVKLYPLPHTYVVKDLVPDLTHFY
KQYKSIEPYLQRETPSPDGKEYRQSKEDRRKLDGLYECILCACCSTSCPSYWWNAEEYLGPAILLQSYRWLADSR
DEHKAERKTKLENSMSLYRCHTILNCTRACPKGLNPGKAIAEIKQQMAMGA*
Coding >OphauG2|1436
ATGGCCGCCCTTCGATCTTCAGCCCGGGCCCTCGCCTCCATCCGGGCGAATCCCCACCGCCCTGCCCTCGTCTTG
GCCCGCTCAATGGCCTCGGTCAGCGATGCGCCCGCCCAGAAGCAGCCGCAGATGAAGACGTTCCAAATCTACCGA
TGGAACCCCGACTCGCCTGACGAGAAGCCTCGCTTGCAGTCGTATACCCTTGACCTGAACAAGACTGGCCCCATG
GTCCTGGATGCCTTGATTCGCATCAAGAATGAGCTGGATCCCACCCTGACGTTTCGGAGGAGTTGTCGCGAGGGA
ATCTGCGGAAGCTGTGCCATGAACATCAATGGCCAAAACACCCTTGCGTGCCTGTGCCGCATCCCCGAGGCGTCA
ACCGATGTCAAGCTGTACCCGTTGCCACACACCTACGTCGTCAAGGACCTTGTTCCTGACTTGACGCACTTTTAC
AAACAATACAAGTCAATCGAGCCTTATCTTCAGCGCGAAACGCCCTCTCCTGACGGCAAGGAGTATCGCCAGAGC
AAGGAAGACCGGCGCAAACTGGACGGCCTATACGAGTGCATCTTGTGCGCCTGCTGCTCCACCTCGTGTCCATCT
TACTGGTGGAACGCTGAAGAATACCTGGGCCCGGCCATTCTGCTCCAGTCGTACCGATGGCTGGCCGATTCCAGA
GACGAACACAAGGCGGAGCGGAAGACGAAGCTGGAGAATTCAATGAGCCTTTACCGCTGCCACACCATCCTCAAC
TGTACCCGAGCCTGCCCCAAGGGCCTCAACCCAGGCAAGGCTATTGCAGAGATCAAACAACAAATGGCAATGGGC
GCATGA
Transcript >OphauG2|1436
ATGGCCGCCCTTCGATCTTCAGCCCGGGCCCTCGCCTCCATCCGGGCGAATCCCCACCGCCCTGCCCTCGTCTTG
GCCCGCTCAATGGCCTCGGTCAGCGATGCGCCCGCCCAGAAGCAGCCGCAGATGAAGACGTTCCAAATCTACCGA
TGGAACCCCGACTCGCCTGACGAGAAGCCTCGCTTGCAGTCGTATACCCTTGACCTGAACAAGACTGGCCCCATG
GTCCTGGATGCCTTGATTCGCATCAAGAATGAGCTGGATCCCACCCTGACGTTTCGGAGGAGTTGTCGCGAGGGA
ATCTGCGGAAGCTGTGCCATGAACATCAATGGCCAAAACACCCTTGCGTGCCTGTGCCGCATCCCCGAGGCGTCA
ACCGATGTCAAGCTGTACCCGTTGCCACACACCTACGTCGTCAAGGACCTTGTTCCTGACTTGACGCACTTTTAC
AAACAATACAAGTCAATCGAGCCTTATCTTCAGCGCGAAACGCCCTCTCCTGACGGCAAGGAGTATCGCCAGAGC
AAGGAAGACCGGCGCAAACTGGACGGCCTATACGAGTGCATCTTGTGCGCCTGCTGCTCCACCTCGTGTCCATCT
TACTGGTGGAACGCTGAAGAATACCTGGGCCCGGCCATTCTGCTCCAGTCGTACCGATGGCTGGCCGATTCCAGA
GACGAACACAAGGCGGAGCGGAAGACGAAGCTGGAGAATTCAATGAGCCTTTACCGCTGCCACACCATCCTCAAC
TGTACCCGAGCCTGCCCCAAGGGCCTCAACCCAGGCAAGGCTATTGCAGAGATCAAACAACAAATGGCAATGGGC
GCATGA
Gene >OphauG2|1436
ATGGCCGCCCTTCGATCTTCAGCCCGGGCCCTCGCCTCCATCCGGGCGAATCCCCACCGCCCTGCCCTCGTCTTG
GCCCGCTCAATGGCCTCGGTCAGCGATGCGCCCGCCCAGAAGCAGCCGCAGATGAAGACGTTCCAAATCTACCGA
TGGAACCCCGACTCGCCTGACGAGAAGCCTCGCTTGCAGTCGTATACCCTTGACCTGAACAAGACTGGCCCCATG
GTCCTGGATGCCTTGATTCGCATCAAGAATGAGCTGGATCCCACCCTGACGTTTCGGAGGAGTTGTCGCGAGGGA
ATCTGCGGAAGCTGTGCCATGAACATCAATGGCCAAAACACCCTTGCGTGCCTGTGTAGGAACCGCCTGGCCCCT
CGCCTACTCGGCCGCTTTGACTGACAGTCGTGCAGGCCGCATCCCCGAGGCGTCAACCGATGTCAAGCTGTACCC
GTTGCCACACACCTACGTCGTCAAGGACCTTGTTCCTGACTTGACGCACTTTTACAAACAATACAAGTCAATCGA
GCCTTATCTTCAGCGCGAAACGCCCTCTCCTGACGTAAGTAGTATTCGTGAGTCACTGCACCCTTGGCACTAAGT
CCTCAATCTTGTTGTAGGGCAAGGAGTATCGCCAGAGCAAGGAAGACCGGCGCAAACTGGACGGCCTATACGAGT
GCATCTTGTGCGCCTGCTGCTCCACCTCGTGTCCATCTTACTGGTGGAACGCTGAAGAATACCTGGGCCCGGCCA
TTCTGCTCCAGTCGTACCGATGGCTGGCCGATTCCAGAGACGAACACAAGGCGGAGCGGAAGACGAAGCTGGAGA
ATTCAATGAGCCTTTACCGCTGCCACACCATCCTCAACTGTACCCGAGCCTGCCCCAAGGGCCTCAACCCAGGCA
AGGCTATTGCAGAGATCAAACAACAAATGGCAATGGGCGCATGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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