Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|1428
Gene name
LocationContig_1428:1659..3162
Strand-
Gene length (bp)1503
Transcript length (bp)1446
Coding sequence length (bp)1446
Protein length (aa) 482

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00010 HLH Helix-loop-helix DNA-binding domain 9.6E-12 331 374

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q04635|ESC1_SCHPO Protein esc1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=esc1 PE=2 SV=1 323 386 1.0E-15

GO

GO Term Description Terminal node
GO:0046983 protein dimerization activity Yes
GO:0005488 binding No
GO:0005515 protein binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Helix-loop-helix

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|1428
MELCLSYVTRAFTPPQRLLVNVWTLSLGTHYNPELTWWPCADTSAASFSVNGLSPTTSAYHSSSTDKTPSPVATN
LVPQALVSPATSNMSVASMVSPTSSAGYEHRRFERPTSLEAPTPNGATLGENLALGVAAARRESVDSRINQGFSD
MRLGGSPYASNNQSSTSIHNTMHTPRTSRPGLEALSVHRISNGYQPSADRNPEATKTVRTAPAITGPATGHIARA
AEPTKGQAWAFPEEEIQRVGPPSRYNDSRRSSITESIASSQFTTESRLPPGQRRLDDGADPRLSHLPDFPAVHHH
SMQHKQLSDLQAEEAAGVTGSQPYSRTPELRVSHKLAERKRRTEMKELFDQLRDLMPQERGSKASKWEILTKAIA
EHQKQSDHIRLLQAHYNNALNEIELLRRQIHASRVDGVHATAHSQQGPPPPGSQAGAFTTDPYVNGSRTELPPLR
SISGSIPNGPDSMTGVQYEAPRVNGWRSERY*
Coding >OphauG2|1428
ATGGAACTCTGCCTCAGTTACGTGACTCGGGCTTTTACTCCACCACAGAGGCTTCTAGTAAACGTATGGACTCTT
TCACTTGGTACTCATTATAATCCTGAGCTCACCTGGTGGCCCTGTGCAGATACCTCAGCAGCCTCGTTTAGCGTC
AACGGTCTGAGCCCTACCACTTCTGCTTATCACTCGTCCTCAACCGACAAGACGCCCTCCCCCGTGGCGACAAAC
TTGGTGCCCCAAGCTCTTGTTTCTCCTGCCACTAGTAACATGAGTGTTGCTTCCATGGTTTCGCCCACCAGTTCC
GCTGGATACGAGCACCGTCGATTCGAACGACCAACGTCTCTCGAAGCCCCCACGCCCAATGGCGCTACTTTGGGT
GAAAACCTGGCTCTCGGGGTTGCTGCCGCGAGGCGAGAAAGTGTTGATAGCAGAATCAATCAAGGCTTTAGCGAC
ATGCGCCTCGGCGGCTCTCCCTATGCTAGTAACAACCAATCTTCCACCTCAATCCACAACACCATGCACACGCCA
CGCACCTCTCGTCCTGGGCTCGAGGCTTTGTCAGTCCATAGAATCTCCAATGGCTACCAGCCTAGTGCCGACAGG
AATCCCGAGGCAACAAAGACGGTGAGGACAGCGCCAGCCATTACTGGGCCTGCTACTGGTCACATCGCTCGAGCC
GCAGAGCCCACCAAGGGTCAAGCTTGGGCTTTCCCCGAGGAGGAAATTCAGCGGGTTGGTCCACCTTCTCGCTAC
AACGACTCAAGGCGCAGCAGCATCACGGAGTCAATCGCCAGCAGCCAATTCACAACAGAGTCACGGCTGCCTCCT
GGCCAGCGCAGGCTGGACGATGGTGCTGATCCGCGCTTGTCGCACCTACCCGATTTCCCTGCTGTGCACCATCAC
TCAATGCAACATAAACAGCTCAGCGATCTTCAAGCCGAGGAGGCTGCCGGTGTCACTGGCTCGCAGCCTTATAGC
AGAACTCCGGAGCTACGAGTGAGCCACAAACTTGCAGAGCGCAAACGCCGGACAGAAATGAAGGAGCTTTTTGAC
CAGTTGCGCGATCTCATGCCCCAGGAGCGCGGATCAAAGGCATCCAAATGGGAAATCCTCACCAAAGCTATCGCA
GAACACCAAAAGCAAAGCGATCACATACGGTTGTTGCAAGCACATTACAACAATGCACTCAACGAGATTGAGCTT
CTTCGTCGCCAAATCCACGCCTCAAGGGTTGATGGAGTTCATGCGACTGCGCATTCGCAGCAAGGTCCACCACCA
CCAGGCTCTCAAGCCGGAGCCTTCACTACGGATCCCTATGTCAATGGCAGCAGGACGGAGCTTCCGCCGTTGCGC
TCCATCAGCGGTAGCATACCCAATGGGCCGGATTCGATGACGGGGGTGCAGTATGAGGCTCCGAGAGTAAACGGC
TGGCGTTCGGAAAGATATTGA
Transcript >OphauG2|1428
ATGGAACTCTGCCTCAGTTACGTGACTCGGGCTTTTACTCCACCACAGAGGCTTCTAGTAAACGTATGGACTCTT
TCACTTGGTACTCATTATAATCCTGAGCTCACCTGGTGGCCCTGTGCAGATACCTCAGCAGCCTCGTTTAGCGTC
AACGGTCTGAGCCCTACCACTTCTGCTTATCACTCGTCCTCAACCGACAAGACGCCCTCCCCCGTGGCGACAAAC
TTGGTGCCCCAAGCTCTTGTTTCTCCTGCCACTAGTAACATGAGTGTTGCTTCCATGGTTTCGCCCACCAGTTCC
GCTGGATACGAGCACCGTCGATTCGAACGACCAACGTCTCTCGAAGCCCCCACGCCCAATGGCGCTACTTTGGGT
GAAAACCTGGCTCTCGGGGTTGCTGCCGCGAGGCGAGAAAGTGTTGATAGCAGAATCAATCAAGGCTTTAGCGAC
ATGCGCCTCGGCGGCTCTCCCTATGCTAGTAACAACCAATCTTCCACCTCAATCCACAACACCATGCACACGCCA
CGCACCTCTCGTCCTGGGCTCGAGGCTTTGTCAGTCCATAGAATCTCCAATGGCTACCAGCCTAGTGCCGACAGG
AATCCCGAGGCAACAAAGACGGTGAGGACAGCGCCAGCCATTACTGGGCCTGCTACTGGTCACATCGCTCGAGCC
GCAGAGCCCACCAAGGGTCAAGCTTGGGCTTTCCCCGAGGAGGAAATTCAGCGGGTTGGTCCACCTTCTCGCTAC
AACGACTCAAGGCGCAGCAGCATCACGGAGTCAATCGCCAGCAGCCAATTCACAACAGAGTCACGGCTGCCTCCT
GGCCAGCGCAGGCTGGACGATGGTGCTGATCCGCGCTTGTCGCACCTACCCGATTTCCCTGCTGTGCACCATCAC
TCAATGCAACATAAACAGCTCAGCGATCTTCAAGCCGAGGAGGCTGCCGGTGTCACTGGCTCGCAGCCTTATAGC
AGAACTCCGGAGCTACGAGTGAGCCACAAACTTGCAGAGCGCAAACGCCGGACAGAAATGAAGGAGCTTTTTGAC
CAGTTGCGCGATCTCATGCCCCAGGAGCGCGGATCAAAGGCATCCAAATGGGAAATCCTCACCAAAGCTATCGCA
GAACACCAAAAGCAAAGCGATCACATACGGTTGTTGCAAGCACATTACAACAATGCACTCAACGAGATTGAGCTT
CTTCGTCGCCAAATCCACGCCTCAAGGGTTGATGGAGTTCATGCGACTGCGCATTCGCAGCAAGGTCCACCACCA
CCAGGCTCTCAAGCCGGAGCCTTCACTACGGATCCCTATGTCAATGGCAGCAGGACGGAGCTTCCGCCGTTGCGC
TCCATCAGCGGTAGCATACCCAATGGGCCGGATTCGATGACGGGGGTGCAGTATGAGGCTCCGAGAGTAAACGGC
TGGCGTTCGGAAAGATATTGA
Gene >OphauG2|1428
ATGGAACTCTGCCTCAGTTACGTGACTCGGGCTTTTACTCCACCACAGAGGCTTCTAGTAAACGTATGGACTCTT
TCACTTGGTACTCATTATAATCCTGAGCTCACCTGGTGGCCCTGTGCAGATACCTCAGCAGCCTCGTTTAGCGTC
AACGGTCTGAGCCCTACCACTTCTGCTTATCACTCGTCCTCAACCGACAAGACGCCCTCCCCCGTGGCGACAAAC
TTGGTGCCCCAAGCTCTTGTTTCTCCTGCCACTAGTAACATGAGTGTTGCTTCCATGGTTTCGCCCACCAGTTCC
GCTGGATACGAGCACCGTCGATTCGAACGACCAACGTCTCTCGAAGCCCCCACGCCCAATGGCGCTACTTTGGGT
GAAAACCTGGCTCTCGGGGTTGCTGCCGCGAGGCGAGAAAGTGTTGATAGCAGAATCAATCAAGGCTTTAGCGAC
ATGCGCCTCGGCGGCTCTCCCTATGCTAGTAACAACCAATCTTCCACCTCAATCCACAACACCATGCACACGCCA
CGCACCTCTCGTCCTGGGCTCGAGGCTTTGTCAGTCCATAGAATCTCCAATGGCTACCAGCCTAGTGCCGACAGG
AATCCCGAGGCAACAAAGACGGTGAGGACAGCGCCAGCCATTACTGGGCCTGCTACTGGTCACATCGCTCGAGCC
GCAGAGCCCACCAAGGGTCAAGCTTGGGCTTTCCCCGAGGAGGAAATTCAGCGGGTTGGTCCACCTTCTCGCTAC
AACGACTCAAGGCGCAGCAGCATCACGGAGTCAATCGCCAGCAGCCAATTCACAACAGAGTCACGGCTGCCTCCT
GGCCAGCGCAGGCTGGACGATGGTGCTGATCCGCGCTTGTCGCACCTACCCGATTTCCCTGCTGTGCACCATCAC
TCAATGCAACATAAACAGCTCAGCGATCTTCAAGCCGAGGAGGCTGCCGGTGTCACTGGCTCGCAGCCTTATAGC
AGAACTCCGGAGCTACGAGTGAGCCACAAACTTGCAGAGCGCAAACGCCGGACAGAAATGAAGGAGCTTTTTGAC
CAGTTGCGCGATCTCATGCCCCAGGAGCGCGGATCAAAGGCATCCAAATGGGAAATCCTCACCAAAGGTTGTTTT
GATCTATTGCCTTGCATTCTTTCCCACACAAGCTGACTTGTGGCTACAGCTATCGCAGAACACCAAAAGCAAAGC
GATCACATACGGTTGTTGCAAGCACATTACAACAATGCACTCAACGAGATTGAGCTTCTTCGTCGCCAAATCCAC
GCCTCAAGGGTTGATGGAGTTCATGCGACTGCGCATTCGCAGCAAGGTCCACCACCACCAGGCTCTCAAGCCGGA
GCCTTCACTACGGATCCCTATGTCAATGGCAGCAGGACGGAGCTTCCGCCGTTGCGCTCCATCAGCGGTAGCATA
CCCAATGGGCCGGATTCGATGACGGGGGTGCAGTATGAGGCTCCGAGAGTAAACGGCTGGCGTTCGGAAAGATAT
TGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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