© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|138 |
| Gene name | |
| Location | Contig_1018:4392..5282 |
| Strand | - |
| Gene length (bp) | 890 |
| Transcript length (bp) | 603 |
| Coding sequence length (bp) | 603 |
| Protein length (aa) | 201 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00137 | ATP-synt_C | ATP synthase subunit C | 3.3E-15 | 47 | 105 |
| PF00137 | ATP-synt_C | ATP synthase subunit C | 1.3E-10 | 133 | 189 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O14046|VATO_SCHPO | Probable V-type proton ATPase 20 kDa proteolipid subunit OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vma16 PE=3 SV=1 | 16 | 197 | 2.0E-82 |
| sp|P23968|VATO_YEAST | V-type proton ATPase subunit c'' OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VMA16 PE=1 SV=1 | 14 | 197 | 6.0E-67 |
| sp|Q91V37|VATO_MOUSE | V-type proton ATPase 21 kDa proteolipid subunit OS=Mus musculus GN=Atp6v0b PE=1 SV=1 | 11 | 195 | 1.0E-62 |
| sp|Q2TA24|VATO_BOVIN | V-type proton ATPase 21 kDa proteolipid subunit OS=Bos taurus GN=ATP6V0B PE=2 SV=1 | 11 | 195 | 2.0E-62 |
| sp|Q99437|VATO_HUMAN | V-type proton ATPase 21 kDa proteolipid subunit OS=Homo sapiens GN=ATP6V0B PE=2 SV=1 | 27 | 195 | 3.0E-62 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O14046|VATO_SCHPO | Probable V-type proton ATPase 20 kDa proteolipid subunit OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vma16 PE=3 SV=1 | 16 | 197 | 2.0E-82 |
| sp|P23968|VATO_YEAST | V-type proton ATPase subunit c'' OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VMA16 PE=1 SV=1 | 14 | 197 | 6.0E-67 |
| sp|Q91V37|VATO_MOUSE | V-type proton ATPase 21 kDa proteolipid subunit OS=Mus musculus GN=Atp6v0b PE=1 SV=1 | 11 | 195 | 1.0E-62 |
| sp|Q2TA24|VATO_BOVIN | V-type proton ATPase 21 kDa proteolipid subunit OS=Bos taurus GN=ATP6V0B PE=2 SV=1 | 11 | 195 | 2.0E-62 |
| sp|Q99437|VATO_HUMAN | V-type proton ATPase 21 kDa proteolipid subunit OS=Homo sapiens GN=ATP6V0B PE=2 SV=1 | 27 | 195 | 3.0E-62 |
| sp|Q9SZY7|VATO1_ARATH | V-type proton ATPase subunit c''1 OS=Arabidopsis thaliana GN=VHA-c''1 PE=1 SV=1 | 27 | 195 | 6.0E-60 |
| sp|Q9SLA2|VATO2_ARATH | V-type proton ATPase subunit c''2 OS=Arabidopsis thaliana GN=VHA-c''2 PE=1 SV=1 | 33 | 195 | 1.0E-59 |
| sp|Q96473|VATL_KALDA | V-type proton ATPase 16 kDa proteolipid subunit OS=Kalanchoe daigremontiana PE=2 SV=1 | 37 | 196 | 1.0E-19 |
| sp|P68162|VATL_BETVU | V-type proton ATPase 16 kDa proteolipid subunit OS=Beta vulgaris GN=VMAC1 PE=2 SV=1 | 37 | 196 | 1.0E-19 |
| sp|P68161|VATL_MESCR | V-type proton ATPase 16 kDa proteolipid subunit OS=Mesembryanthemum crystallinum GN=VMAC1 PE=2 SV=1 | 37 | 196 | 1.0E-19 |
| sp|O22552|VATL_VIGRR | V-type proton ATPase 16 kDa proteolipid subunit OS=Vigna radiata var. radiata PE=2 SV=1 | 37 | 196 | 1.0E-19 |
| sp|P59228|VATL2_ARATH | V-type proton ATPase subunit c2 OS=Arabidopsis thaliana GN=VHA-c2 PE=2 SV=1 | 37 | 196 | 1.0E-19 |
| sp|Q43434|VATL_GOSHI | V-type proton ATPase 16 kDa proteolipid subunit OS=Gossypium hirsutum GN=CVA16-2 PE=2 SV=1 | 37 | 196 | 1.0E-19 |
| sp|P0DH92|VATL1_ARATH | V-type proton ATPase subunit c1 OS=Arabidopsis thaliana GN=VHA-c1 PE=2 SV=1 | 37 | 196 | 1.0E-19 |
| sp|P0DH93|VATL3_ARATH | V-type proton ATPase subunit c3 OS=Arabidopsis thaliana GN=VHA-c3 PE=1 SV=1 | 37 | 196 | 1.0E-19 |
| sp|P0DH94|VATL5_ARATH | V-type proton ATPase subunit c5 OS=Arabidopsis thaliana GN=VHA-c5 PE=2 SV=1 | 37 | 196 | 1.0E-19 |
| sp|P59229|VATL4_ARATH | V-type proton ATPase subunit c4 OS=Arabidopsis thaliana GN=VHA-c4 PE=2 SV=1 | 37 | 196 | 1.0E-19 |
| sp|Q40585|VATL_TOBAC | V-type proton ATPase 16 kDa proteolipid subunit OS=Nicotiana tabacum PE=2 SV=1 | 37 | 196 | 4.0E-19 |
| sp|O24011|VATL_SOLLC | V-type proton ATPase 16 kDa proteolipid subunit OS=Solanum lycopersicum PE=2 SV=1 | 37 | 196 | 4.0E-19 |
| sp|Q0IUB5|VATL_ORYSJ | V-type proton ATPase 16 kDa proteolipid subunit OS=Oryza sativa subsp. japonica GN=VATP-P1 PE=2 SV=1 | 37 | 196 | 5.0E-19 |
| sp|A2ZBW5|VATL_ORYSI | V-type proton ATPase 16 kDa proteolipid subunit OS=Oryza sativa subsp. indica GN=VATP-P1 PE=2 SV=1 | 37 | 196 | 5.0E-19 |
| sp|Q00607|VATL_CANTR | V-type proton ATPase 16 kDa proteolipid subunit OS=Candida tropicalis GN=VMA3 PE=3 SV=1 | 40 | 196 | 1.0E-18 |
| sp|P23957|VATL_AVESA | V-type proton ATPase 16 kDa proteolipid subunit OS=Avena sativa GN=VATP-P1 PE=2 SV=1 | 37 | 196 | 1.0E-18 |
| sp|Q43362|VATL_CHRCT | V-type proton ATPase 16 kDa proteolipid subunit OS=Chrysotila carteri GN=VAP PE=2 SV=1 | 47 | 193 | 4.0E-18 |
| sp|P54642|VATL_DICDI | V-type proton ATPase proteolipid subunit OS=Dictyostelium discoideum GN=vatP PE=2 SV=1 | 23 | 197 | 6.0E-18 |
| sp|P31413|VATL_NEUCR | V-type proton ATPase 16 kDa proteolipid subunit OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=vma-3 PE=2 SV=1 | 40 | 195 | 6.0E-18 |
| sp|P34546|VATL2_CAEEL | V-type proton ATPase 16 kDa proteolipid subunit 2/3 OS=Caenorhabditis elegans GN=vha-2 PE=2 SV=2 | 36 | 190 | 9.0E-18 |
| sp|Q612A5|VATL2_CAEBR | V-type proton ATPase 16 kDa proteolipid subunit 2/3 OS=Caenorhabditis briggsae GN=vha-2 PE=3 SV=1 | 36 | 190 | 1.0E-17 |
| sp|P50515|VATL_SCHPO | V-type proton ATPase 16 kDa proteolipid subunit OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vma3 PE=3 SV=1 | 59 | 196 | 3.0E-17 |
| sp|Q17046|VATL_ASCSU | V-type proton ATPase 16 kDa proteolipid subunit OS=Ascaris suum GN=12 PE=3 SV=1 | 56 | 190 | 5.0E-17 |
| sp|P31403|VATL_MANSE | V-type proton ATPase 16 kDa proteolipid subunit OS=Manduca sexta GN=VHA16 PE=2 SV=1 | 47 | 193 | 2.0E-16 |
| sp|Q26250|VATL_NEPNO | V-type proton ATPase 16 kDa proteolipid subunit OS=Nephrops norvegicus PE=2 SV=1 | 40 | 196 | 2.0E-16 |
| sp|O16110|VATL_AEDAE | V-type proton ATPase 16 kDa proteolipid subunit OS=Aedes aegypti GN=AAEL000291 PE=2 SV=2 | 47 | 193 | 5.0E-16 |
| sp|P23956|VATL_BOVIN | V-type proton ATPase 16 kDa proteolipid subunit OS=Bos taurus GN=ATP6V0C PE=1 SV=1 | 44 | 193 | 5.0E-16 |
| sp|P55277|VATL_HELVI | V-type proton ATPase 16 kDa proteolipid subunit OS=Heliothis virescens GN=VHA16 PE=2 SV=1 | 47 | 193 | 6.0E-16 |
| sp|O18882|VATL_SHEEP | V-type proton ATPase 16 kDa proteolipid subunit OS=Ovis aries GN=ATP6V0C PE=2 SV=1 | 44 | 193 | 7.0E-16 |
| sp|P25515|VATL1_YEAST | V-type proton ATPase subunit c OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VMA3 PE=1 SV=1 | 40 | 196 | 1.0E-15 |
| sp|P27449|VATL_HUMAN | V-type proton ATPase 16 kDa proteolipid subunit OS=Homo sapiens GN=ATP6V0C PE=1 SV=1 | 44 | 193 | 2.0E-15 |
| sp|P23380|VATL_DROME | V-type proton ATPase 16 kDa proteolipid subunit OS=Drosophila melanogaster GN=Vha16-1 PE=2 SV=1 | 47 | 193 | 2.0E-15 |
| sp|P63082|VATL_MOUSE | V-type proton ATPase 16 kDa proteolipid subunit OS=Mus musculus GN=Atp6v0c PE=1 SV=1 | 56 | 193 | 5.0E-15 |
| sp|P63081|VATL_RAT | V-type proton ATPase 16 kDa proteolipid subunit OS=Rattus norvegicus GN=Atp6v0c PE=2 SV=1 | 56 | 193 | 5.0E-15 |
| sp|Q9URZ8|VATL2_SCHPO | V-type proton ATPase 16 kDa proteolipid subunit 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vma11 PE=3 SV=1 | 56 | 196 | 9.0E-15 |
| sp|Q03105|VATL_TORMA | V-type proton ATPase 16 kDa proteolipid subunit OS=Torpedo marmorata PE=1 SV=1 | 56 | 193 | 1.0E-14 |
| sp|Q24808|VATL_ENTDI | V-type proton ATPase 16 kDa proteolipid subunit OS=Entamoeba dispar GN=VMA3 PE=2 SV=1 | 40 | 196 | 7.0E-14 |
| sp|Q6FUY5|VATL2_CANGA | V-type proton ATPase 16 kDa proteolipid subunit 2 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=VMA11 PE=3 SV=1 | 48 | 196 | 1.0E-13 |
| sp|Q21898|VATL1_CAEEL | V-type proton ATPase 16 kDa proteolipid subunit 1 OS=Caenorhabditis elegans GN=vha-1 PE=2 SV=1 | 62 | 190 | 1.0E-13 |
| sp|Q41773|VATL_MAIZE | V-type proton ATPase 16 kDa proteolipid subunit (Fragment) OS=Zea mays PE=2 SV=2 | 87 | 196 | 3.0E-13 |
| sp|Q24810|VATL_ENTHI | V-type proton ATPase 16 kDa proteolipid subunit OS=Entamoeba histolytica GN=VMA3 PE=3 SV=1 | 36 | 200 | 3.0E-12 |
| sp|Q9Y874|VATL2_NEUCR | V-type proton ATPase 16 kDa proteolipid subunit 2 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=vma-11 PE=2 SV=2 | 48 | 195 | 3.0E-12 |
| sp|Q6BSB9|VATL2_DEBHA | V-type proton ATPase 16 kDa proteolipid subunit 2 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=VMA11 PE=3 SV=1 | 37 | 195 | 4.0E-12 |
| sp|P32842|VATL2_YEAST | V-type proton ATPase subunit c' OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VMA11 PE=1 SV=1 | 55 | 196 | 6.0E-12 |
| sp|Q6CT28|VATL2_KLULA | V-type proton ATPase 16 kDa proteolipid subunit 2 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=VMA11 PE=3 SV=1 | 37 | 195 | 8.0E-12 |
| sp|Q755G4|VATL2_ASHGO | V-type proton ATPase 16 kDa proteolipid subunit 2 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=VMA11 PE=3 SV=1 | 55 | 193 | 2.0E-11 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0015078 | proton transmembrane transporter activity | Yes |
| GO:1902600 | proton transmembrane transport | Yes |
| GO:0033177 | proton-transporting two-sector ATPase complex, proton-transporting domain | Yes |
| GO:0005575 | cellular_component | No |
| GO:0034220 | ion transmembrane transport | No |
| GO:0098796 | membrane protein complex | No |
| GO:0051179 | localization | No |
| GO:0051234 | establishment of localization | No |
| GO:0055085 | transmembrane transport | No |
| GO:0006811 | ion transport | No |
| GO:0008150 | biological_process | No |
| GO:0098660 | inorganic ion transmembrane transport | No |
| GO:0032991 | protein-containing complex | No |
| GO:0009987 | cellular process | No |
| GO:0008324 | cation transmembrane transporter activity | No |
| GO:0015075 | ion transmembrane transporter activity | No |
| GO:0015318 | inorganic molecular entity transmembrane transporter activity | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0022890 | inorganic cation transmembrane transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0098655 | cation transmembrane transport | No |
| GO:0098662 | inorganic cation transmembrane transport | No |
| GO:0006810 | transport | No |
| GO:0006812 | cation transport | No |
| GO:0005215 | transporter activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 20 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 2 | 24 | 22 |
| 2 | 44 | 66 | 22 |
| 3 | 86 | 108 | 22 |
| 4 | 128 | 150 | 22 |
| 5 | 170 | 192 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|138 MGLTYGLGGVASFITVAGAYMLFTGSGESFNVGAFLESVSPYAWADLGIALCIGLSVVGAAWGIFITGSSILGAG VKAPRIRTKNLISIIFCEVVAIYGVIMSIVFSSKVDSVNGSEAFSANSYYTGYALFWSGLTVGLCNLVCGVAVGI NGSGAALADAADASLFVKILVIEIFSSVLGLFGLIIGLLVSGKANSFGKN* |
| Coding | >OphauG2|138 ATGGGCCTCACATATGGCCTGGGCGGCGTCGCGTCCTTTATCACCGTCGCCGGAGCTTACATGCTCTTTACCGGC AGCGGCGAATCGTTCAACGTCGGCGCCTTTCTCGAATCCGTCTCCCCCTATGCCTGGGCCGACTTGGGCATTGCC CTCTGCATCGGTCTCTCAGTCGTTGGCGCTGCGTGGGGCATCTTCATCACCGGGTCCTCCATTCTCGGCGCCGGC GTCAAGGCTCCCCGCATCCGCACAAAAAACCTAATCTCAATCATCTTTTGCGAAGTCGTGGCTATTTACGGCGTC ATCATGTCCATTGTCTTCTCCTCAAAGGTTGACAGCGTCAATGGCTCCGAAGCCTTTTCCGCAAACTCTTACTAC ACTGGCTACGCCCTCTTTTGGTCTGGCTTGACTGTCGGCTTGTGCAATCTCGTCTGCGGCGTTGCTGTCGGTATC AATGGCAGCGGCGCCGCTCTCGCCGACGCTGCTGACGCTTCACTCTTCGTCAAGATTCTCGTCATTGAGATTTTT AGTTCTGTCCTTGGCCTCTTTGGCCTCATCATCGGACTCCTCGTGTCGGGCAAAGCAAACTCTTTCGGCAAGAAT TAG |
| Transcript | >OphauG2|138 ATGGGCCTCACATATGGCCTGGGCGGCGTCGCGTCCTTTATCACCGTCGCCGGAGCTTACATGCTCTTTACCGGC AGCGGCGAATCGTTCAACGTCGGCGCCTTTCTCGAATCCGTCTCCCCCTATGCCTGGGCCGACTTGGGCATTGCC CTCTGCATCGGTCTCTCAGTCGTTGGCGCTGCGTGGGGCATCTTCATCACCGGGTCCTCCATTCTCGGCGCCGGC GTCAAGGCTCCCCGCATCCGCACAAAAAACCTAATCTCAATCATCTTTTGCGAAGTCGTGGCTATTTACGGCGTC ATCATGTCCATTGTCTTCTCCTCAAAGGTTGACAGCGTCAATGGCTCCGAAGCCTTTTCCGCAAACTCTTACTAC ACTGGCTACGCCCTCTTTTGGTCTGGCTTGACTGTCGGCTTGTGCAATCTCGTCTGCGGCGTTGCTGTCGGTATC AATGGCAGCGGCGCCGCTCTCGCCGACGCTGCTGACGCTTCACTCTTCGTCAAGATTCTCGTCATTGAGATTTTT AGTTCTGTCCTTGGCCTCTTTGGCCTCATCATCGGACTCCTCGTGTCGGGCAAAGCAAACTCTTTCGGCAAGAAT TAG |
| Gene | >OphauG2|138 ATGGGCCTCACATATGGCCTGGGCGGCGTCGCGTCCTTTATCACCGTCGCCGGAGCTTGTACGAAACACACACAC ACACAAAAAAGGGGAACGGATTTTACAACTAACGCAGGCCTCAACGCTGCTTAGACATGCTCTTTACCGGCAGCG GCGAATCGTTCAACGTCGGCGCCTTTCTCGAATCCGTCTCCCCCTATGCCTGGGCCGACTTGGGCATTGCCCTCT GCATCGGTCTCTCAGTCGTTGGCGCTGCGTGGTATATATATATCCCATACCCTCAAACTCTCACTCACACGCTCT TCTCGCCGCATCAACTGACCACTCGAAAAAAAAAAACCTTGACCTGCTTCAGGGGCATCTTCATCACCGGGTCCT CCATTCTCGGCGCCGGCGTCAAGGCTCCCCGCATCCGCACAAAAAACCTAATCTCAATCATCTTTTGCGAAGTCG TGGCTATTTACGGCGTCATCATGTCCATTGTCTTCTCCTCAAAGGTTGACAGCGTCAATGGCTCCGAAGCCTTTT CCGCAAACTCTTACTACACTGGCTACGCCCTCTTTTGGTCTGGCTTGACTGTCGGCTTGTGCAATCTCGTCTGCG GCGTTGCTGTCGGTATCAATGGCAGCGGCGCCGCTCTCGCCGACGCTGCTGACGCTTCACTGTCAGTTTTTTTTC CCCCTTCTTCTTCCTACCATGCCCCCCCTTGCCTCTAATGACTGTTTTTTTTAAAAAAAAATCAATCGAGGCACT TACGAGGCAAGCGTGCTAATACTCGTGGTAGCTTCGTCAAGATTCTCGTCATTGAGATTTTTAGTTCTGTCCTTG GCCTCTTTGGCCTCATCATCGGACTCCTCGTGTCGGGCAAAGCAAACTCTTTCGGCAAGAATTAG |