Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauG2\|1378
Gene name
Location	Contig_1409:494..1906
Strand	-
Gene length (bp)	1412
Transcript length (bp)	1305
Coding sequence length (bp)	1305
Protein length (aa)	435

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF02469	Fasciclin	Fasciclin domain	3.1E-15	111	243
PF02469	Fasciclin	Fasciclin domain	1.9E-23	257	404

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P74615\|Y1483_SYNY3	Uncharacterized protein sll1483 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll1483 PE=3 SV=1	258	405	3.0E-07
sp\|Q8CFM6\|STAB2_RAT	Stabilin-2 (Fragment) OS=Rattus norvegicus GN=Stab2 PE=1 SV=1	137	331	3.0E-07
sp\|Q8WWQ8\|STAB2_HUMAN	Stabilin-2 OS=Homo sapiens GN=STAB2 PE=1 SV=3	100	330	6.0E-07

GO

(None)

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 17	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauG2\|1378 MKAALLASSSLVFAQAVPHQQQQPLGHVATTAPGAKPDKPAFWPSGLVAPDSLTTAVDDSVQAFESAIDAASRLS HDLAASLDDSLGQTSHKHRDSSHQTIYQQIHACKYTSRFAKLVDKHPAIVKLLNTTGHDANLTLFVPVDKAFEDP HHDGHHYDEDDKEAVEKLLRYHIGIGEYPALRVLGTNTVPTALHEARLGDESQRLRTSVGLGGVKVNFYSRVVAA DFRASNGIIHGVSHVLVPPPPVGLLLTAFPSHFSTLLLAYKTTDFVNFVHGIHMPGGSTVFAPSNTAFGRLGEAT NAFLFNSPKGRKYLAALLKYHIVPNATLYSDAYYDHVDNDAQPASSRREHYDLKTLLGDARVSADVLRWAGFAFF RINGFAHVSVRDGVASNGVVQVLDSVLLPPRKTSPIVSDNDVAGGIGVEELKARLDAYL*
Coding	>OphauG2\|1378 ATGAAGGCGGCACTTTTAGCATCGTCTAGTCTTGTCTTTGCACAAGCCGTGCCTCACCAGCAGCAACAGCCTCTC GGCCATGTTGCCACCACTGCCCCAGGTGCAAAACCCGACAAGCCCGCCTTTTGGCCGAGCGGCCTCGTCGCCCCC GACTCTCTCACCACGGCTGTAGATGACTCGGTGCAGGCGTTTGAATCCGCCATCGACGCCGCCTCTCGTCTGTCT CATGACCTAGCCGCCAGCTTGGATGACAGCCTTGGCCAAACCAGCCACAAGCATCGTGACTCGAGCCACCAGACG ATTTACCAGCAGATTCATGCGTGCAAGTACACGTCGCGCTTTGCCAAACTCGTCGACAAGCATCCCGCCATTGTC AAGCTGCTCAACACCACCGGCCACGACGCCAACCTGACGCTCTTTGTCCCCGTCGACAAGGCCTTTGAAGACCCG CATCATGACGGCCATCACTATGACGAGGACGACAAGGAGGCGGTTGAGAAGCTGCTGAGATATCATATTGGCATT GGCGAGTATCCCGCCCTCCGCGTCTTGGGGACAAACACGGTGCCGACGGCGCTCCACGAAGCCCGCCTGGGCGAC GAAAGCCAGCGACTGCGGACGAGTGTCGGGCTTGGAGGAGTCAAGGTCAACTTTTATAGCAGAGTAGTTGCCGCC GACTTTAGAGCCTCCAACGGCATCATCCACGGCGTCAGCCACGTCCTCGTCCCGCCGCCCCCCGTCGGCCTCCTC CTCACCGCATTCCCCAGCCACTTTTCCACCCTCCTCCTCGCCTACAAAACGACGGATTTCGTAAACTTTGTCCAC GGCATCCACATGCCCGGCGGCAGCACCGTCTTTGCGCCCAGCAACACCGCCTTTGGCCGCCTCGGCGAAGCCACC AATGCATTCCTCTTCAACTCGCCCAAGGGCCGCAAGTACTTGGCCGCGCTGCTCAAATACCACATTGTCCCCAAC GCCACGCTCTACAGCGACGCCTACTACGACCACGTCGACAATGACGCCCAGCCAGCCTCGTCTCGCCGCGAGCAC TACGACTTGAAGACGCTGCTGGGCGACGCGCGTGTCAGCGCCGACGTGCTCCGATGGGCCGGCTTTGCCTTTTTC AGAATCAATGGCTTCGCCCACGTCAGTGTCCGCGACGGCGTGGCGTCCAACGGAGTCGTCCAAGTGCTCGACTCG GTTCTGCTTCCGCCCCGCAAGACGTCGCCTATTGTCTCTGACAATGACGTTGCAGGTGGCATTGGCGTCGAGGAG CTCAAGGCCAGGCTCGACGCTTATCTGTGA
Transcript	>OphauG2\|1378 ATGAAGGCGGCACTTTTAGCATCGTCTAGTCTTGTCTTTGCACAAGCCGTGCCTCACCAGCAGCAACAGCCTCTC GGCCATGTTGCCACCACTGCCCCAGGTGCAAAACCCGACAAGCCCGCCTTTTGGCCGAGCGGCCTCGTCGCCCCC GACTCTCTCACCACGGCTGTAGATGACTCGGTGCAGGCGTTTGAATCCGCCATCGACGCCGCCTCTCGTCTGTCT CATGACCTAGCCGCCAGCTTGGATGACAGCCTTGGCCAAACCAGCCACAAGCATCGTGACTCGAGCCACCAGACG ATTTACCAGCAGATTCATGCGTGCAAGTACACGTCGCGCTTTGCCAAACTCGTCGACAAGCATCCCGCCATTGTC AAGCTGCTCAACACCACCGGCCACGACGCCAACCTGACGCTCTTTGTCCCCGTCGACAAGGCCTTTGAAGACCCG CATCATGACGGCCATCACTATGACGAGGACGACAAGGAGGCGGTTGAGAAGCTGCTGAGATATCATATTGGCATT GGCGAGTATCCCGCCCTCCGCGTCTTGGGGACAAACACGGTGCCGACGGCGCTCCACGAAGCCCGCCTGGGCGAC GAAAGCCAGCGACTGCGGACGAGTGTCGGGCTTGGAGGAGTCAAGGTCAACTTTTATAGCAGAGTAGTTGCCGCC GACTTTAGAGCCTCCAACGGCATCATCCACGGCGTCAGCCACGTCCTCGTCCCGCCGCCCCCCGTCGGCCTCCTC CTCACCGCATTCCCCAGCCACTTTTCCACCCTCCTCCTCGCCTACAAAACGACGGATTTCGTAAACTTTGTCCAC GGCATCCACATGCCCGGCGGCAGCACCGTCTTTGCGCCCAGCAACACCGCCTTTGGCCGCCTCGGCGAAGCCACC AATGCATTCCTCTTCAACTCGCCCAAGGGCCGCAAGTACTTGGCCGCGCTGCTCAAATACCACATTGTCCCCAAC GCCACGCTCTACAGCGACGCCTACTACGACCACGTCGACAATGACGCCCAGCCAGCCTCGTCTCGCCGCGAGCAC TACGACTTGAAGACGCTGCTGGGCGACGCGCGTGTCAGCGCCGACGTGCTCCGATGGGCCGGCTTTGCCTTTTTC AGAATCAATGGCTTCGCCCACGTCAGTGTCCGCGACGGCGTGGCGTCCAACGGAGTCGTCCAAGTGCTCGACTCG GTTCTGCTTCCGCCCCGCAAGACGTCGCCTATTGTCTCTGACAATGACGTTGCAGGTGGCATTGGCGTCGAGGAG CTCAAGGCCAGGCTCGACGCTTATCTGTGA
Gene	>OphauG2\|1378 ATGAAGGCGGCACTTTTAGCATCGTCTAGTCTTGTCTTTGCACAAGCCGTGCCTCACCAGCAGCAACAGCCTCTC GGCCATGTTGCCACCACTGCCCCAGGTGCAAAACCCGACAAGCCCGCCTTTTGGCCGAGCGGCCTCGTCGCCCCC GACTCTCTCACCACGGCTGTAGATGACTCGGTGCAGGCGTTTGAATCCGCCATCGACGCCGCCTCTCGTCTGTCT CATGACCTAGCCGCCAGCTTGGATGACAGCCTTGGCCAAACCAGCCACAAGCATCGTGACTCGAGCCACCAGACG ATTTACCAGCAGATTCATGCGTGCAAGTACACGTCGCGCTTTGCCAAACTCGTCGACAAGCATCCCGCCATTGTC AAGCTGCTCAACACCACCGGCCACGACGCCAACCTGACGCTCTTTGTCCCCGTCGACAAGGCCTTTGAAGACCCG CATCATGACGGCCATCACTATGACGAGGACGACAAGGAGGCGGTTGAGAAGCTGCTGAGATATCATATTGGCATT GGCGAGTATCCCGCCCTCCGCGTCTTGGGGACAAACACGGTGCCGACGGCGCTCCACGAAGCCCGCCTGGGCGAC GAAAGCCAGCGACTGCGGACGAGTGTCGGGCTTGGAGGAGTCAAGGTCAACTTTTATAGCAGAGTAGTTGCCGCC GACTTTGTACGCTCTCCCCCCTTTTTTACTTTTGCTCACCATCACCACCATATGCTTGGCCACCGTCATGTTTGA CTCTTGTGTTTTTTTTGTGCTAAAACTTGCACGTCTAGAGAGCCTCCAACGGCATCATCCACGGCGTCAGCCACG TCCTCGTCCCGCCGCCCCCCGTCGGCCTCCTCCTCACCGCATTCCCCAGCCACTTTTCCACCCTCCTCCTCGCCT ACAAAACGACGGATTTCGTAAACTTTGTCCACGGCATCCACATGCCCGGCGGCAGCACCGTCTTTGCGCCCAGCA ACACCGCCTTTGGCCGCCTCGGCGAAGCCACCAATGCATTCCTCTTCAACTCGCCCAAGGGCCGCAAGTACTTGG CCGCGCTGCTCAAATACCACATTGTCCCCAACGCCACGCTCTACAGCGACGCCTACTACGACCACGTCGACAATG ACGCCCAGCCAGCCTCGTCTCGCCGCGAGCACTACGACTTGAAGACGCTGCTGGGCGACGCGCGTGTCAGCGCCG ACGTGCTCCGATGGGCCGGCTTTGCCTTTTTCAGAATCAATGGCTTCGCCCACGTCAGTGTCCGCGACGGCGTGG CGTCCAACGGAGTCGTCCAAGTGCTCGACTCGGTTCTGCTTCCGCCCCGCAAGACGTCGCCTATTGTCTCTGACA ATGACGTTGCAGGTGGCATTGGCGTCGAGGAGCTCAAGGCCAGGCTCGACGCTTATCTGTGA

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