Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|1322
Gene name
LocationContig_1393:72..537
Strand+
Gene length (bp)465
Transcript length (bp)411
Coding sequence length (bp)411
Protein length (aa) 137

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PFAM Domains

(None)

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|O94491|YC7A_SCHPO Uncharacterized transporter C417.10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC417.10 PE=3 SV=1 1 135 5.0E-14
sp|Q07904|THI73_YEAST Thiamine pathway transporter THI73 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI73 PE=1 SV=1 6 136 2.0E-12
sp|Q9C0V8|YHJ1_SCHPO Uncharacterized transporter PB10D8.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBPB10D8.01 PE=3 SV=1 9 131 4.0E-11
sp|O74923|YJ7D_SCHPO Uncharacterized transporter C757.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC757.13 PE=3 SV=1 6 136 4.0E-10
sp|P15365|DAL5_YEAST Allantoate permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAL5 PE=1 SV=1 14 135 7.0E-09
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|O94491|YC7A_SCHPO Uncharacterized transporter C417.10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC417.10 PE=3 SV=1 1 135 5.0E-14
sp|Q07904|THI73_YEAST Thiamine pathway transporter THI73 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI73 PE=1 SV=1 6 136 2.0E-12
sp|Q9C0V8|YHJ1_SCHPO Uncharacterized transporter PB10D8.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBPB10D8.01 PE=3 SV=1 9 131 4.0E-11
sp|O74923|YJ7D_SCHPO Uncharacterized transporter C757.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC757.13 PE=3 SV=1 6 136 4.0E-10
sp|P15365|DAL5_YEAST Allantoate permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAL5 PE=1 SV=1 14 135 7.0E-09
sp|O94572|YGDF_SCHPO Uncharacterized transporter C1773.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1773.15 PE=3 SV=1 1 135 2.0E-08
sp|B5BP49|YP55_SCHPO Uncharacterized transporter C460.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC460.05 PE=3 SV=1 14 136 2.0E-06
sp|Q9C0U9|YQD3_SCHPO Uncharacterized transporter PB1C11.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCPB1C11.03 PE=1 SV=1 6 77 2.0E-06
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 23 0.5

Transmembrane Domains

Domain # Start End Length
1 13 35 22
2 79 101 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|1322
MSFLNPKTHRSGLLAGIYLVNAVVAPLPIFFNWTVANCAGGTKRAFSSALISGSFSIGNIIGPQTFQARDAPDFH
PAKLAVMGTQAGCALTTFCLFLYYLWANRRRATAAAEHQYLDPSLWSAQTDRQNKHFRYTY*
Coding >OphauG2|1322
ATGTCCTTTTTGAATCCCAAGACGCACCGCTCCGGCCTCCTGGCTGGCATCTATCTCGTCAATGCCGTCGTGGCG
CCTCTGCCCATCTTTTTCAATTGGACCGTCGCCAACTGCGCCGGCGGCACAAAGCGCGCCTTCTCCTCTGCCCTC
ATCTCCGGCTCCTTTTCCATCGGCAACATCATTGGCCCCCAGACCTTCCAGGCCCGCGACGCCCCCGACTTCCAT
CCCGCCAAACTGGCCGTCATGGGCACCCAGGCTGGCTGTGCCCTGACCACCTTTTGTCTTTTTCTCTACTATCTT
TGGGCCAACCGTCGTCGCGCCACCGCTGCTGCCGAGCACCAATATCTCGACCCCTCGCTCTGGTCCGCCCAAACC
GATCGCCAGAACAAACACTTTCGCTACACGTATTAG
Transcript >OphauG2|1322
ATGTCCTTTTTGAATCCCAAGACGCACCGCTCCGGCCTCCTGGCTGGCATCTATCTCGTCAATGCCGTCGTGGCG
CCTCTGCCCATCTTTTTCAATTGGACCGTCGCCAACTGCGCCGGCGGCACAAAGCGCGCCTTCTCCTCTGCCCTC
ATCTCCGGCTCCTTTTCCATCGGCAACATCATTGGCCCCCAGACCTTCCAGGCCCGCGACGCCCCCGACTTCCAT
CCCGCCAAACTGGCCGTCATGGGCACCCAGGCTGGCTGTGCCCTGACCACCTTTTGTCTTTTTCTCTACTATCTT
TGGGCCAACCGTCGTCGCGCCACCGCTGCTGCCGAGCACCAATATCTCGACCCCTCGCTCTGGTCCGCCCAAACC
GATCGCCAGAACAAACACTTTCGCTACACGTATTAG
Gene >OphauG2|1322
ATGTCCTTTTTGAATCCCAAGACGCACCGCTCCGGCCTCCTGGCTGGCATCTATCTCGTCAATGCCGTCGTGGCG
CCTCTGCCCATCTTTTTCAATGTAAGCTTGCCCCTGCTGGCCCAGACGCCAGCCCCATGGCTAACTCGCCTCCAG
TGGACCGTCGCCAACTGCGCCGGCGGCACAAAGCGCGCCTTCTCCTCTGCCCTCATCTCCGGCTCCTTTTCCATC
GGCAACATCATTGGCCCCCAGACCTTCCAGGCCCGCGACGCCCCCGACTTCCATCCCGCCAAACTGGCCGTCATG
GGCACCCAGGCTGGCTGTGCCCTGACCACCTTTTGTCTTTTTCTCTACTATCTTTGGGCCAACCGTCGTCGCGCC
ACCGCTGCTGCCGAGCACCAATATCTCGACCCCTCGCTCTGGTCCGCCCAAACCGATCGCCAGAACAAACACTTT
CGCTACACGTATTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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