© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | OphauG2|1317 |
| Gene name | |
| Location | Contig_139:21448..22366 |
| Strand | - |
| Gene length (bp) | 918 |
| Transcript length (bp) | 918 |
| Coding sequence length (bp) | 918 |
| Protein length (aa) | 306 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF06682 | SARAF | SOCE-associated regulatory factor of calcium homoeostasis | 3.5E-97 | 7 | 305 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q0IHF9|SARAF_XENLA | Store-operated calcium entry-associated regulatory factor OS=Xenopus laevis GN=saraf PE=2 SV=2 | 5 | 305 | 6.0E-28 |
| sp|Q8R3Q0|SARAF_MOUSE | Store-operated calcium entry-associated regulatory factor OS=Mus musculus GN=Saraf PE=1 SV=2 | 23 | 175 | 8.0E-28 |
| sp|Q6AYN2|SARAF_RAT | Store-operated calcium entry-associated regulatory factor OS=Rattus norvegicus GN=Saraf PE=2 SV=1 | 23 | 175 | 1.0E-27 |
| sp|Q5R491|SARAF_PONAB | Store-operated calcium entry-associated regulatory factor OS=Pongo abelii GN=SARAF PE=2 SV=2 | 23 | 175 | 1.0E-24 |
| sp|Q96BY9|SARAF_HUMAN | Store-operated calcium entry-associated regulatory factor OS=Homo sapiens GN=SARAF PE=1 SV=1 | 23 | 175 | 2.0E-24 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q0IHF9|SARAF_XENLA | Store-operated calcium entry-associated regulatory factor OS=Xenopus laevis GN=saraf PE=2 SV=2 | 5 | 305 | 6.0E-28 |
| sp|Q8R3Q0|SARAF_MOUSE | Store-operated calcium entry-associated regulatory factor OS=Mus musculus GN=Saraf PE=1 SV=2 | 23 | 175 | 8.0E-28 |
| sp|Q6AYN2|SARAF_RAT | Store-operated calcium entry-associated regulatory factor OS=Rattus norvegicus GN=Saraf PE=2 SV=1 | 23 | 175 | 1.0E-27 |
| sp|Q5R491|SARAF_PONAB | Store-operated calcium entry-associated regulatory factor OS=Pongo abelii GN=SARAF PE=2 SV=2 | 23 | 175 | 1.0E-24 |
| sp|Q96BY9|SARAF_HUMAN | Store-operated calcium entry-associated regulatory factor OS=Homo sapiens GN=SARAF PE=1 SV=1 | 23 | 175 | 2.0E-24 |
| sp|Q08E24|SARAF_BOVIN | Store-operated calcium entry-associated regulatory factor OS=Bos taurus GN=SARAF PE=2 SV=1 | 22 | 175 | 2.0E-24 |
| sp|F1QPC3|SARAF_DANRE | Store-operated calcium entry-associated regulatory factor OS=Danio rerio GN=saraf PE=2 SV=1 | 23 | 136 | 6.0E-24 |
| sp|F7C1E2|SARAF_XENTR | Store-operated calcium entry-associated regulatory factor OS=Xenopus tropicalis GN=saraf PE=3 SV=2 | 22 | 136 | 2.0E-22 |
| sp|Q54P59|SARAF_DICDI | Store-operated calcium entry-associated regulatory factor OS=Dictyostelium discoideum GN=saraf PE=3 SV=1 | 25 | 178 | 4.0E-22 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0030176 | integral component of endoplasmic reticulum membrane | Yes |
| GO:2001256 | regulation of store-operated calcium entry | Yes |
| GO:0008150 | biological_process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0031300 | intrinsic component of organelle membrane | No |
| GO:0051924 | regulation of calcium ion transport | No |
| GO:0005575 | cellular_component | No |
| GO:0043269 | regulation of ion transport | No |
| GO:0010959 | regulation of metal ion transport | No |
| GO:0050789 | regulation of biological process | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0031301 | integral component of organelle membrane | No |
| GO:0016021 | integral component of membrane | No |
| GO:0051049 | regulation of transport | No |
| GO:0031227 | intrinsic component of endoplasmic reticulum membrane | No |
| GO:0032879 | regulation of localization | No |
| GO:0065007 | biological regulation | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 19 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 157 | 179 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|1317 MLLETLALLAYLPLLSNALRPKDAILLSKVQSLTLRGNGAKTTHRRLSPISQLKCISSRDICQLHHIDVMQCTNQ GSSYDDSDVEWSCVASLPTELKLGSTDVICEGYSSSQDPYVLRGSCGVEYRLMLTPQGEQRYPELAHSRPFTFGH GHGSPDWSAWLFALVFFSVLAWIVYAACFGSNPTRRQGGWRPGGGGDGWGGGGGGWGPGWGPDGDPPPPYPGSKP QATQRQAWTPGFWSGLAGGAAAGYMAGSRGNRNDDRRQPRFSSNWSAGPSSPRPSPFASSSSGGGSARHESTGFG STRRR* |
| Coding | >OphauG2|1317 ATGCTGCTCGAAACACTGGCCCTCCTCGCCTACCTTCCTCTTCTCTCCAACGCCTTGCGCCCCAAGGATGCTATC CTCTTATCCAAGGTCCAGTCTCTTACCCTTCGCGGTAATGGCGCCAAGACGACGCATCGCCGCCTCTCCCCCATT TCTCAACTCAAGTGCATCTCGTCGCGCGACATTTGCCAACTCCACCATATAGATGTCATGCAATGCACCAATCAG GGCTCCTCTTACGACGACAGCGATGTCGAATGGAGCTGCGTCGCCTCTCTCCCTACCGAGCTCAAGCTCGGTAGC ACCGATGTCATTTGCGAGGGCTACTCGTCCTCCCAGGATCCCTATGTTCTCAGGGGCTCATGTGGCGTCGAGTAC AGGCTCATGCTAACTCCTCAGGGCGAGCAACGGTATCCCGAGCTTGCTCATTCTCGTCCTTTTACATTTGGTCAT GGCCATGGGAGCCCCGATTGGTCCGCCTGGCTCTTTGCCCTCGTATTCTTTTCCGTCTTGGCTTGGATCGTCTAC GCAGCATGCTTTGGAAGTAATCCAACCAGGCGTCAAGGCGGCTGGAGGCCCGGAGGCGGAGGTGACGGCTGGGGA GGAGGAGGCGGAGGCTGGGGGCCTGGCTGGGGGCCCGATGGCGACCCTCCACCGCCCTACCCAGGAAGCAAGCCC CAAGCCACACAGCGTCAGGCATGGACTCCTGGATTCTGGAGTGGACTTGCAGGCGGTGCTGCAGCTGGCTACATG GCTGGTAGCCGCGGCAACCGCAACGACGACCGTCGCCAACCCAGATTTTCCAGTAATTGGAGCGCAGGCCCTTCC AGTCCCAGGCCCTCGCCATTTGCTTCGTCGTCCAGTGGCGGTGGCTCTGCTCGTCACGAGAGCACCGGCTTCGGT TCCACGCGCCGTAGGTAG |
| Transcript | >OphauG2|1317 ATGCTGCTCGAAACACTGGCCCTCCTCGCCTACCTTCCTCTTCTCTCCAACGCCTTGCGCCCCAAGGATGCTATC CTCTTATCCAAGGTCCAGTCTCTTACCCTTCGCGGTAATGGCGCCAAGACGACGCATCGCCGCCTCTCCCCCATT TCTCAACTCAAGTGCATCTCGTCGCGCGACATTTGCCAACTCCACCATATAGATGTCATGCAATGCACCAATCAG GGCTCCTCTTACGACGACAGCGATGTCGAATGGAGCTGCGTCGCCTCTCTCCCTACCGAGCTCAAGCTCGGTAGC ACCGATGTCATTTGCGAGGGCTACTCGTCCTCCCAGGATCCCTATGTTCTCAGGGGCTCATGTGGCGTCGAGTAC AGGCTCATGCTAACTCCTCAGGGCGAGCAACGGTATCCCGAGCTTGCTCATTCTCGTCCTTTTACATTTGGTCAT GGCCATGGGAGCCCCGATTGGTCCGCCTGGCTCTTTGCCCTCGTATTCTTTTCCGTCTTGGCTTGGATCGTCTAC GCAGCATGCTTTGGAAGTAATCCAACCAGGCGTCAAGGCGGCTGGAGGCCCGGAGGCGGAGGTGACGGCTGGGGA GGAGGAGGCGGAGGCTGGGGGCCTGGCTGGGGGCCCGATGGCGACCCTCCACCGCCCTACCCAGGAAGCAAGCCC CAAGCCACACAGCGTCAGGCATGGACTCCTGGATTCTGGAGTGGACTTGCAGGCGGTGCTGCAGCTGGCTACATG GCTGGTAGCCGCGGCAACCGCAACGACGACCGTCGCCAACCCAGATTTTCCAGTAATTGGAGCGCAGGCCCTTCC AGTCCCAGGCCCTCGCCATTTGCTTCGTCGTCCAGTGGCGGTGGCTCTGCTCGTCACGAGAGCACCGGCTTCGGT TCCACGCGCCGTAGGTAG |
| Gene | >OphauG2|1317 ATGCTGCTCGAAACACTGGCCCTCCTCGCCTACCTTCCTCTTCTCTCCAACGCCTTGCGCCCCAAGGATGCTATC CTCTTATCCAAGGTCCAGTCTCTTACCCTTCGCGGTAATGGCGCCAAGACGACGCATCGCCGCCTCTCCCCCATT TCTCAACTCAAGTGCATCTCGTCGCGCGACATTTGCCAACTCCACCATATAGATGTCATGCAATGCACCAATCAG GGCTCCTCTTACGACGACAGCGATGTCGAATGGAGCTGCGTCGCCTCTCTCCCTACCGAGCTCAAGCTCGGTAGC ACCGATGTCATTTGCGAGGGCTACTCGTCCTCCCAGGATCCCTATGTTCTCAGGGGCTCATGTGGCGTCGAGTAC AGGCTCATGCTAACTCCTCAGGGCGAGCAACGGTATCCCGAGCTTGCTCATTCTCGTCCTTTTACATTTGGTCAT GGCCATGGGAGCCCCGATTGGTCCGCCTGGCTCTTTGCCCTCGTATTCTTTTCCGTCTTGGCTTGGATCGTCTAC GCAGCATGCTTTGGAAGTAATCCAACCAGGCGTCAAGGCGGCTGGAGGCCCGGAGGCGGAGGTGACGGCTGGGGA GGAGGAGGCGGAGGCTGGGGGCCTGGCTGGGGGCCCGATGGCGACCCTCCACCGCCCTACCCAGGAAGCAAGCCC CAAGCCACACAGCGTCAGGCATGGACTCCTGGATTCTGGAGTGGACTTGCAGGCGGTGCTGCAGCTGGCTACATG GCTGGTAGCCGCGGCAACCGCAACGACGACCGTCGCCAACCCAGATTTTCCAGTAATTGGAGCGCAGGCCCTTCC AGTCCCAGGCCCTCGCCATTTGCTTCGTCGTCCAGTGGCGGTGGCTCTGCTCGTCACGAGAGCACCGGCTTCGGT TCCACGCGCCGTAGGTAG |