Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|1294
Gene name
LocationContig_1380:2318..3941
Strand-
Gene length (bp)1623
Transcript length (bp)1341
Coding sequence length (bp)1341
Protein length (aa) 447

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03105 SPX SPX domain 1.8E-51 1 316
PF00097 zf-C3HC4 Zinc finger, C3HC4 type (RING finger) 8.1E-09 351 389
PF13920 zf-C3HC4_3 Zinc finger, C3HC4 type (RING finger) 1.5E-07 348 393
PF13923 zf-C3HC4_2 Zinc finger, C3HC4 type (RING finger) 6.4E-07 351 389
PF13639 zf-RING_2 Ring finger domain 2.0E-06 351 390
PF13445 zf-RING_UBOX RING-type zinc-finger 8.5E-06 351 387

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|O14212|YDT7_SCHPO Uncharacterized RING finger protein C6B12.07c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC6B12.07c PE=3 SV=2 1 446 2.0E-82
sp|Q5A1M4|TRY3_CANAL Transcriptional regulator of yeast form adherence 3 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=TRY3 PE=2 SV=1 1 446 1.0E-81
sp|Q9CQ29|RN151_MOUSE RING finger protein 151 OS=Mus musculus GN=Rnf151 PE=1 SV=1 349 409 6.0E-08
sp|Q2TBT8|RN151_BOVIN RING finger protein 151 OS=Bos taurus GN=RNF151 PE=2 SV=1 342 409 1.0E-07
sp|Q2KHN1|RN151_HUMAN RING finger protein 151 OS=Homo sapiens GN=RNF151 PE=2 SV=1 344 409 1.0E-06
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[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|O14212|YDT7_SCHPO Uncharacterized RING finger protein C6B12.07c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC6B12.07c PE=3 SV=2 1 446 2.0E-82
sp|Q5A1M4|TRY3_CANAL Transcriptional regulator of yeast form adherence 3 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=TRY3 PE=2 SV=1 1 446 1.0E-81
sp|Q9CQ29|RN151_MOUSE RING finger protein 151 OS=Mus musculus GN=Rnf151 PE=1 SV=1 349 409 6.0E-08
sp|Q2TBT8|RN151_BOVIN RING finger protein 151 OS=Bos taurus GN=RNF151 PE=2 SV=1 342 409 1.0E-07
sp|Q2KHN1|RN151_HUMAN RING finger protein 151 OS=Homo sapiens GN=RNF151 PE=2 SV=1 344 409 1.0E-06
sp|Q9CQE0|RN138_MOUSE E3 ubiquitin-protein ligase RNF138 OS=Mus musculus GN=Rnf138 PE=2 SV=1 335 399 1.0E-06
sp|Q8WVD3|RN138_HUMAN E3 ubiquitin-protein ligase RNF138 OS=Homo sapiens GN=RNF138 PE=1 SV=1 335 399 2.0E-06
sp|Q32LN5|RN138_BOVIN E3 ubiquitin-protein ligase RNF138 OS=Bos taurus GN=RNF138 PE=2 SV=1 335 399 2.0E-06
sp|Q99PD2|RN138_RAT E3 ubiquitin-protein ligase RNF138 OS=Rattus norvegicus GN=Rnf138 PE=2 SV=1 335 399 3.0E-06
sp|Q0IIM1|RN168_BOVIN E3 ubiquitin-protein ligase RNF168 OS=Bos taurus GN=RNF168 PE=2 SV=2 343 436 1.0E-05
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GO

GO Term Description Terminal node
GO:0046872 metal ion binding Yes
GO:0003674 molecular_function No
GO:0043169 cation binding No
GO:0005488 binding No
GO:0043167 ion binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 24 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|1294
MKFAHDFKETLANQGFPPHWVNRAIPYGQLKKCLKKVQRELEDLGLDAQTLRALLDPHTTSPVALQYRLKSASDS
NFVRPKLTLYLDLQDGVAVDASLTPTSRRFFERIAAETTLHDSNLTSERSSAPSNILSDGDDAEPLSTTATPSCD
RIEVPLVFDGEFFSLLHNDVISLDALQTEEEQKITSEVVALGNNVSHVSRPSRFFKSDLGRWRHIFEIYINAQIF
FATNERDHGVRSSVKALEQLRWFQTEVDKRELVTSFKLSESKLAFSKFLVLNANLLKNLQFQELNKLAVSKILKK
FDKRTALGVSQTFPTVIQSEGLLSRDLAKDMCAHLSEQLVAVVPQLNDFLCPICFAVAYRPVRLDCQHVFCIRCV
VKIQRRQENTCPLCRSHVVMRASADNLDEKLGRFLKKYFPEEVKEKQRANEIERGIEEYGPGYKHQDCVIM*
Coding >OphauG2|1294
ATGAAGTTTGCTCACGACTTTAAAGAAACGCTGGCCAATCAAGGCTTCCCTCCTCACTGGGTAAACCGAGCAATT
CCATACGGCCAACTAAAGAAATGTCTCAAAAAGGTACAGCGAGAACTCGAGGACCTCGGTCTCGATGCTCAAACG
TTACGCGCGCTGCTTGACCCTCACACAACATCGCCCGTTGCGCTACAATATAGGCTCAAATCTGCCAGTGACTCC
AACTTCGTTCGACCAAAGCTCACCTTATACCTTGATCTGCAGGATGGAGTCGCAGTCGACGCCTCCCTCACGCCC
ACGTCGCGTCGCTTTTTTGAGCGAATTGCTGCCGAAACGACTCTACATGACAGTAACCTAACCAGCGAACGGTCT
TCAGCGCCTAGCAACATCCTGAGTGACGGTGATGACGCTGAGCCTTTATCCACGACAGCAACGCCCAGCTGTGAC
AGAATCGAGGTGCCCCTTGTTTTTGACGGCGAGTTTTTCAGCCTACTGCATAACGACGTCATTAGTCTTGATGCC
CTGCAGACCGAGGAGGAACAGAAAATTACGTCCGAGGTAGTGGCTTTAGGAAACAATGTTTCGCATGTTTCACGT
CCCAGCCGTTTCTTCAAGAGCGACCTTGGCCGTTGGCGTCACATTTTCGAGATCTACATCAACGCACAAATCTTC
TTCGCCACCAATGAACGTGACCATGGAGTCAGGTCCAGTGTCAAAGCCCTTGAGCAATTACGTTGGTTTCAAACC
GAGGTGGACAAGCGAGAGCTCGTTACCAGTTTTAAACTAAGCGAAAGCAAACTAGCCTTCTCCAAATTCCTAGTC
CTGAATGCCAATTTGCTCAAGAACCTGCAGTTCCAGGAGCTCAATAAGCTAGCCGTTTCCAAAATCCTCAAGAAA
TTTGACAAGAGAACGGCTCTTGGTGTCTCGCAAACTTTTCCAACAGTAATTCAGTCCGAAGGCCTCTTGTCACGA
GACCTGGCCAAGGACATGTGTGCCCATTTATCAGAGCAACTAGTCGCTGTTGTACCTCAACTCAATGATTTCCTC
TGCCCAATTTGCTTCGCAGTCGCCTATCGGCCAGTACGGCTTGACTGTCAGCACGTTTTTTGCATCCGCTGCGTC
GTTAAAATTCAGCGGAGACAAGAAAATACTTGTCCTCTATGCCGATCGCATGTGGTAATGAGGGCTTCGGCTGAT
AACTTGGACGAGAAATTGGGAAGGTTTTTGAAAAAATATTTTCCCGAGGAGGTCAAAGAAAAACAACGTGCAAAC
GAAATTGAACGTGGGATAGAAGAATATGGCCCTGGCTACAAACATCAAGACTGCGTCATCATGTAG
Transcript >OphauG2|1294
ATGAAGTTTGCTCACGACTTTAAAGAAACGCTGGCCAATCAAGGCTTCCCTCCTCACTGGGTAAACCGAGCAATT
CCATACGGCCAACTAAAGAAATGTCTCAAAAAGGTACAGCGAGAACTCGAGGACCTCGGTCTCGATGCTCAAACG
TTACGCGCGCTGCTTGACCCTCACACAACATCGCCCGTTGCGCTACAATATAGGCTCAAATCTGCCAGTGACTCC
AACTTCGTTCGACCAAAGCTCACCTTATACCTTGATCTGCAGGATGGAGTCGCAGTCGACGCCTCCCTCACGCCC
ACGTCGCGTCGCTTTTTTGAGCGAATTGCTGCCGAAACGACTCTACATGACAGTAACCTAACCAGCGAACGGTCT
TCAGCGCCTAGCAACATCCTGAGTGACGGTGATGACGCTGAGCCTTTATCCACGACAGCAACGCCCAGCTGTGAC
AGAATCGAGGTGCCCCTTGTTTTTGACGGCGAGTTTTTCAGCCTACTGCATAACGACGTCATTAGTCTTGATGCC
CTGCAGACCGAGGAGGAACAGAAAATTACGTCCGAGGTAGTGGCTTTAGGAAACAATGTTTCGCATGTTTCACGT
CCCAGCCGTTTCTTCAAGAGCGACCTTGGCCGTTGGCGTCACATTTTCGAGATCTACATCAACGCACAAATCTTC
TTCGCCACCAATGAACGTGACCATGGAGTCAGGTCCAGTGTCAAAGCCCTTGAGCAATTACGTTGGTTTCAAACC
GAGGTGGACAAGCGAGAGCTCGTTACCAGTTTTAAACTAAGCGAAAGCAAACTAGCCTTCTCCAAATTCCTAGTC
CTGAATGCCAATTTGCTCAAGAACCTGCAGTTCCAGGAGCTCAATAAGCTAGCCGTTTCCAAAATCCTCAAGAAA
TTTGACAAGAGAACGGCTCTTGGTGTCTCGCAAACTTTTCCAACAGTAATTCAGTCCGAAGGCCTCTTGTCACGA
GACCTGGCCAAGGACATGTGTGCCCATTTATCAGAGCAACTAGTCGCTGTTGTACCTCAACTCAATGATTTCCTC
TGCCCAATTTGCTTCGCAGTCGCCTATCGGCCAGTACGGCTTGACTGTCAGCACGTTTTTTGCATCCGCTGCGTC
GTTAAAATTCAGCGGAGACAAGAAAATACTTGTCCTCTATGCCGATCGCATGTGGTAATGAGGGCTTCGGCTGAT
AACTTGGACGAGAAATTGGGAAGGTTTTTGAAAAAATATTTTCCCGAGGAGGTCAAAGAAAAACAACGTGCAAAC
GAAATTGAACGTGGGATAGAAGAATATGGCCCTGGCTACAAACATCAAGACTGCGTCATCATGTAG
Gene >OphauG2|1294
ATGAAGTTTGCTCACGACTTTAAAGAAACGCTGGCCAATCAAGGTGAGATAAGCCAATAATAATAGACGCCCATC
CTCTCATTGAAACTTGCCCTGCATGCGCATCTCGGCTAACCCGAACCCGCAGGCTTCCCTCCTCACTGGGTAAAC
CGAGCAATTCCATACGGCCAACTAAAGAAATGTCTCAAAAAGGTACAGCGAGAACTCGAGGACCTCGGTCTCGAT
GCTCAAACGTTACGCGCGCTGCTTGACCCTCACACAACATCGCCCGTTGCGCTACAATATAGGCTCAAATGTGCG
CACTGGGTTACATTGCCCCCACACTCATCGGCTCCAAGAATTGCTGATATAGACTGAAGCTGCCAGTGACTCCAA
CTTCGTTCGACCAAAGCTCACCTTATACCTTGATCTGCAGGATGGAGTCGCAGTCGACGCCTCCCTCACGCCCAC
GTCGCGTCGCTTTTTTGAGCGAATTGCTGCCGAAACGACTCTACATGACAGTAACCTAACCAGCGAACGGTCTTC
AGCGCCTAGCAACATCCTGAGTGACGGTGATGACGCTGAGCCTTTATCCACGACAGCAACGCCCAGCTGTGACAG
AATCGAGGTGCCCCTTGTTTTTGACGGCGAGTTTTTCAGCCTACTGCATAACGACGTCATTAGTCTTGATGCCCT
GCAGACCGAGGAGGAACAGAAAATTACGTCCGAGGTAGTGGCTTTAGGAAACAATGTTTCGCATGTTTCACGTCC
CAGCCGTTTCTTCAAGAGCGACCTTGGCCGTTGGCGTCACATTTTCGAGATCTACATCAACGCACAAATCTTCTT
CGCCACCAATGAACGTGACCATGGAGTCAGGTCCAGTGTCAAAGCCCTTGAGCAATTACGTTGGTTTCAAACCGA
GGTGGACAAGCGAGAGCTCGTTACCAGTTTTAAACTAAGCGAAAGCAAACTAGCCTTCTCCAAATTCCTAGTCCT
GAATGCCAATTTGCTCAAGAACCTGCAGTTCCAGGAGCTCAATAAGCTAGCCGTTTCCAAAATCCTCAAGAGTAC
GCCATTATCACGTCTACAAATCCAATCTTAGCCAGTCAGTCAACTAATACCCATGGATAATCAGAATTTGACAAG
AGAACGGCTCTTGGTGTCTCGCAAACTTTTCCAACAGTAATTCAGTCCGAAGGCCTCTTGTCACGAGACCTGGCC
AAGGACATGTGTGCCCATTTATCAGAGCAACTAGTCGCTGTTGTACCTCAACTCAATGATTTCCTCTGCCCAATT
TGCTTCGCAGTCGCCTATCGGCCAGTACGGCTTGACTGTCAGCACGTTTTTTGCATCCGCTGCGTCGTTAAAATT
CAGCGGAGACAAGAAAATACTTGTCCTCTATGCCGATCGCATGTGGTAATGAGGGCTTCGGCTGGTATGGGCAAA
ATCATTTATGAGTCCAGGACCTCTGCTAATCAGTTTGATGTTTCTTATCATGCAGATAACTTGGACGAGAAATTG
GGAAGGTTTTTGAAAAAATATTTTCCCGAGGAGGTCAAAGAAAAACAACGTGCAAACGAAATTGAACGTGGGATA
GAAGAATATGGCCCTGGCTACAAACATCAAGACTGCGTCATCATGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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