© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|1273 |
| Gene name | |
| Location | Contig_1374:172..586 |
| Strand | + |
| Gene length (bp) | 414 |
| Transcript length (bp) | 213 |
| Coding sequence length (bp) | 213 |
| Protein length (aa) | 71 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02238 | COX7a | Cytochrome c oxidase subunit VII | 4.2E-19 | 8 | 62 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 41 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 36 | 58 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|1273 MGIINAKNKVPEHQRFYQQAYKAHTRIWMINPRSRWYMTPFIVLVWGGFGAAIYAGGRKVMGHNTWFSDN* |
| Coding | >OphauG2|1273 ATGGGGATTATCAACGCAAAGAATAAGGTGCCCGAGCATCAGCGCTTCTACCAACAAGCATACAAAGCACACACT CGCATCTGGATGATTAATCCACGAAGCCGCTGGTACATGACACCATTCATAGTATTGGTCTGGGGTGGGTTTGGA GCTGCCATATACGCCGGTGGGCGAAAAGTCATGGGTCACAATACCTGGTTCAGCGATAATTGA |
| Transcript | >OphauG2|1273 ATGGGGATTATCAACGCAAAGAATAAGGTGCCCGAGCATCAGCGCTTCTACCAACAAGCATACAAAGCACACACT CGCATCTGGATGATTAATCCACGAAGCCGCTGGTACATGACACCATTCATAGTATTGGTCTGGGGTGGGTTTGGA GCTGCCATATACGCCGGTGGGCGAAAAGTCATGGGTCACAATACCTGGTTCAGCGATAATTGA |
| Gene | >OphauG2|1273 ATGGGGTACGCATTGCAATTCTCGGCTATTAGAAAAGGGTCTCTAATCTCGTATTGGCCACTAATGTAACTACTG ACATACACAGGATTATCAACGCAAAGAATAAGGTGCCCGAGCATCAGCGCTTCTACCAACAAGCATACAAAGCAC ACACTCGCATCTGGATGATTGTATGATCTCTCACTATTCTAGTGATTCTCATGAGCATTTAGTACATAGCTCACA TGCTTTCAGAATCCACGAAGCCGCTGGTACATGACACCATTCATAGTATTGGTCTGGGGTGGGTTTGGAGGTAAG CCTTGAAAGTATAGTGTATTGTTTACGCCCTGACTGATTCCATCTCTTTCAGCTGCCATATACGCCGGTGGGCGA AAAGTCATGGGTCACAATACCTGGTTCAGCGATAATTGA |