Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauG2\|1241
Gene name
Location	Contig_136:20080..21589
Strand	-
Gene length (bp)	1509
Transcript length (bp)	1035
Coding sequence length (bp)	1035
Protein length (aa)	345

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF01822	WSC	WSC domain	3.7E-11	38	102

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P38739\|WSC4_YEAST	Cell wall integrity and stress response component 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=WSC4 PE=1 SV=1	15	115	7.0E-10

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 24	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	222	244	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauG2\|1241 MASVLKRAPTAGTLLLMASLCAALDPSICANFNTATSMQPKNDIYQTNGLCHDFCISQNQAYAITQGNSCWCSNY TPAKSKQVDTGSCDKPCPAYPSEMCGGNGLFSYIALEAAPAGIRPEETKPSPSSPPPPPPPPSETSTSSTPSPTP TDDANSSSSSSSSSSVEHVATSIVQTVTAGGTIRTVTVIPSPTGDLADSDSSRSRNRDGDGGGGGIGRGGVVGIV VGCIVGVLGIAGAFMFWWLRRKRNAEHEAAGDDPSLRGSSSGMIGRPEMSPGSPGSTGNRSSMLNIDPRMDPFKQ GLYARAGSHESVNTLRDEHDYSRRIHPAKVLRATNPDPVAGDDA*
Coding	>OphauG2\|1241 ATGGCTTCTGTTTTGAAAAGGGCGCCCACGGCGGGCACGCTCTTGTTGATGGCGTCGCTGTGCGCAGCACTGGAC CCGAGCATCTGCGCCAACTTCAACACCGCCACCTCTATGCAACCCAAAAACGACATTTACCAGACAAACGGCCTG TGCCACGACTTCTGCATATCCCAGAACCAGGCCTATGCTATTACACAGGGCAACTCGTGTTGGTGCTCAAACTAT ACGCCAGCAAAGAGCAAGCAGGTCGACACTGGCTCTTGCGACAAGCCATGTCCGGCATACCCCTCTGAAATGTGT GGCGGCAATGGGCTCTTTAGCTATATTGCCCTCGAAGCCGCCCCGGCCGGTATACGCCCAGAAGAGACCAAGCCT TCGCCTTCTTCCCCTCCTCCACCACCGCCGCCCCCGTCAGAGACGAGCACAAGCTCAACACCGTCGCCGACACCG ACTGACGACGCCAACTCGAGCAGCAGCAGCTCCTCCAGCAGCTCCGTCGAGCATGTCGCCACGTCGATTGTGCAA ACGGTGACTGCTGGCGGCACCATTCGCACCGTGACGGTTATCCCCTCGCCAACGGGCGACTTGGCCGACAGCGAC AGCTCGCGATCTAGGAACCGCGACGGCGACGGCGGCGGCGGCGGAATCGGCCGAGGCGGCGTCGTGGGCATTGTT GTCGGCTGTATCGTGGGCGTCTTGGGCATTGCTGGAGCCTTTATGTTTTGGTGGCTGCGCCGCAAGCGGAATGCC GAACACGAGGCGGCGGGCGACGACCCCAGCCTTCGAGGCAGCTCATCAGGCATGATTGGCAGACCAGAAATGTCG CCCGGGTCTCCAGGCTCGACGGGCAACCGCAGCAGCATGCTGAATATCGACCCCCGAATGGACCCCTTCAAGCAG GGTCTATATGCCCGGGCGGGCAGCCACGAAAGCGTCAATACGCTGCGCGACGAACACGACTACTCGCGTCGCATT CATCCTGCAAAGGTGCTGCGAGCTACTAACCCAGACCCTGTTGCTGGCGATGACGCATGA
Transcript	>OphauG2\|1241 ATGGCTTCTGTTTTGAAAAGGGCGCCCACGGCGGGCACGCTCTTGTTGATGGCGTCGCTGTGCGCAGCACTGGAC CCGAGCATCTGCGCCAACTTCAACACCGCCACCTCTATGCAACCCAAAAACGACATTTACCAGACAAACGGCCTG TGCCACGACTTCTGCATATCCCAGAACCAGGCCTATGCTATTACACAGGGCAACTCGTGTTGGTGCTCAAACTAT ACGCCAGCAAAGAGCAAGCAGGTCGACACTGGCTCTTGCGACAAGCCATGTCCGGCATACCCCTCTGAAATGTGT GGCGGCAATGGGCTCTTTAGCTATATTGCCCTCGAAGCCGCCCCGGCCGGTATACGCCCAGAAGAGACCAAGCCT TCGCCTTCTTCCCCTCCTCCACCACCGCCGCCCCCGTCAGAGACGAGCACAAGCTCAACACCGTCGCCGACACCG ACTGACGACGCCAACTCGAGCAGCAGCAGCTCCTCCAGCAGCTCCGTCGAGCATGTCGCCACGTCGATTGTGCAA ACGGTGACTGCTGGCGGCACCATTCGCACCGTGACGGTTATCCCCTCGCCAACGGGCGACTTGGCCGACAGCGAC AGCTCGCGATCTAGGAACCGCGACGGCGACGGCGGCGGCGGCGGAATCGGCCGAGGCGGCGTCGTGGGCATTGTT GTCGGCTGTATCGTGGGCGTCTTGGGCATTGCTGGAGCCTTTATGTTTTGGTGGCTGCGCCGCAAGCGGAATGCC GAACACGAGGCGGCGGGCGACGACCCCAGCCTTCGAGGCAGCTCATCAGGCATGATTGGCAGACCAGAAATGTCG CCCGGGTCTCCAGGCTCGACGGGCAACCGCAGCAGCATGCTGAATATCGACCCCCGAATGGACCCCTTCAAGCAG GGTCTATATGCCCGGGCGGGCAGCCACGAAAGCGTCAATACGCTGCGCGACGAACACGACTACTCGCGTCGCATT CATCCTGCAAAGGTGCTGCGAGCTACTAACCCAGACCCTGTTGCTGGCGATGACGCATGA
Gene	>OphauG2\|1241 ATGGCTTCTGTTTTGAAAAGGGCGCCCACGGCGGGCACGCTCTTGTTGATGGCGTCGCTGTGCGCAGCACTGGAC CCGAGCATCTGCGCCAACTTCAACACCGCCACCTCTATGCAACCCAGTAAGTCTTGTTGATCCACAAGTAGGCAA AGGCTTGGGCTCATTGCTTGAAGAAAACGACATTTACCAGACAAACGGCCTGTGCCACGACTTCTGCATATCCCA GAACCAGGCCTATGCTATTACACAGGGCAACTCGTGTTGGTGCTCAAACTATACGCCAGCAAAGAGCAAGCAGGT CGACACTGGCTCTTGCGACAAGCCATGTCCGGCATACCCCTCTGAAATGTGTGGCGGCAATGGGCTCTTTAGCTA TATTGCCCTCGAAGCCGCCCCGGCCGGTATACGCCCAGAAGAGACCAAGCCTTCGCCTTCTTCCCCTCCTCCACC ACCGCCGCCCCCGTCAGAGGTGAGTCTTGTGTTTTTTTTTGTTGTCACTGTTCTCGTTGCTTCAGTCTGGTAGTG TTTATGCTTTTCTTTTCTTTTCTTTTTTTTTTCGCTTCATCAACCTTTTGCTTCAACATCTTCACTCGATGCAAA CAGAGATAGACCTCGTTTGCAGCGTGCATCTGGCTTGTTGGAGGAACAAAGGGCTTAATTGTATGCATTATATCA GGCCGAAACCGCTACCGCGACAATGTGGAAGACCCAGACTGTGCAGGACACAGTTACTCAATCTGCTTCCCCTCC CCCTCCCCCTCCCCCTCCTGAAACTACTTCAAGCAGTAGCTCTACTTCAGTACGGTCGCATTGCCCGATTTCCAA GGAGAAAAAGAATGATTTGCATTGAGACAAGAGGCGGCTAGGCGCAAGGCTAACTTGGCGGTTTAGACGAGCACA AGCTCAACACCGTCGCCGACACCGACTGACGACGCCAACTCGAGCAGCAGCAGCTCCTCCAGCAGCTCCGTCGAG CATGTCGCCACGTCGATTGTGCAAACGGTGACTGCTGGCGGCACCATTCGCACCGTGACGGTTATCCCCTCGCCA ACGGGCGACTTGGCCGACAGCGACAGCTCGCGATCTAGGAACCGCGACGGCGACGGCGGCGGCGGCGGAATCGGC CGAGGCGGCGTCGTGGGCATTGTTGTCGGCTGTATCGTGGGCGTCTTGGGCATTGCTGGAGCCTTTATGTTTTGG TGGCTGCGCCGCAAGCGGAATGCCGAACACGAGGCGGCGGGCGACGACCCCAGCCTTCGAGGCAGCTCATCAGGC ATGATTGGCAGACCAGAAATGTCGCCCGGGTCTCCAGGCTCGACGGGCAACCGCAGCAGCATGCTGAATATCGAC CCCCGAATGGACCCCTTCAAGCAGGGTCTATATGCCCGGGCGGGCAGCCACGAAAGCGTCAATACGCTGCGCGAC GAACACGACTACTCGCGTCGCATTCATCCTGCAAAGGTGCTGCGAGCTACTAACCCAGACCCTGTTGCTGGCGAT GACGCATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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