Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|122
Gene name
LocationContig_1013:709..2072
Strand-
Gene length (bp)1363
Transcript length (bp)1278
Coding sequence length (bp)1278
Protein length (aa) 426

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13532 2OG-FeII_Oxy_2 2OG-Fe(II) oxygenase superfamily 2.1E-36 113 334
PF06839 zf-GRF GRF zinc finger 1.3E-09 347 391

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q5XIC8|ALKB3_RAT Alpha-ketoglutarate-dependent dioxygenase alkB homolog 3 OS=Rattus norvegicus GN=Alkbh3 PE=2 SV=1 231 346 9.0E-10
sp|Q8K1E6|ALKB3_MOUSE Alpha-ketoglutarate-dependent dioxygenase alkB homolog 3 OS=Mus musculus GN=Alkbh3 PE=1 SV=1 231 347 9.0E-10
sp|Q96Q83|ALKB3_HUMAN Alpha-ketoglutarate-dependent dioxygenase alkB homolog 3 OS=Homo sapiens GN=ALKBH3 PE=1 SV=1 231 346 1.0E-08
sp|Q32L00|ALKB3_BOVIN Alpha-ketoglutarate-dependent dioxygenase alkB homolog 3 OS=Bos taurus GN=ALKBH3 PE=2 SV=1 231 334 1.0E-08
sp|Q9SIE0|ALKB2_ARATH DNA oxidative demethylase ALKBH2 OS=Arabidopsis thaliana GN=ALKBH2 PE=2 SV=2 231 334 1.0E-07

GO

GO Term Description Terminal node
GO:0008270 zinc ion binding Yes
GO:0003674 molecular_function No
GO:0046914 transition metal ion binding No
GO:0046872 metal ion binding No
GO:0043169 cation binding No
GO:0005488 binding No
GO:0043167 ion binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 23 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Zinc finger, GRF-type

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|122
MQDETTEVKVALLASLHGDVDHETLLNLIVAHNGSVSQASLALQSRQAGATKDKASEDKASEDNASGRRQQSLKR
YATASDNGHGAKKPNVRWKKGSTLHLYDADDVSQHTPCSIIHNFLPAHEADELLRELLDEAKTFQKSTFKLFDQV
VSSRHTSSFYVESYEALQGQKADYYYNGSKLTDVRPITRQLSNVKPVVQMAVNSEMERRIRTRYPGGQKLKHQSG
DEWVPNMAFVNCYQGGDESVGWHSDQLTYLGPRAVIGSLSLGVAREFRVRRVCPASGEAAGQIAIHLPHNSLLVM
HAEMQEEWKHCVAPAASIDPHPVAGNRRINITYRHYRDYMHPRHTPRCSCAVPCVLRVVQKRPGNQGRYFWMCHA
GNVPGKQACCFFQWAEFDCHGKPLLPSEPSACNKKAEAAMEPTRVEPRDG*
Coding >OphauG2|122
ATGCAAGACGAAACAACCGAAGTAAAGGTGGCGCTGCTTGCGTCGCTCCATGGCGACGTTGACCACGAAACGCTT
CTCAATCTTATTGTGGCACACAATGGCTCCGTCAGTCAGGCGTCGCTGGCTCTGCAGTCCAGGCAGGCTGGGGCG
ACGAAAGACAAAGCATCGGAAGACAAAGCATCGGAAGACAACGCATCGGGCCGCCGCCAGCAGTCCCTCAAGCGA
TACGCAACGGCTTCCGACAATGGGCATGGGGCCAAGAAGCCGAATGTGAGGTGGAAAAAGGGAAGCACGCTGCAC
CTTTACGATGCCGACGACGTGTCCCAACACACGCCATGCAGCATTATCCACAACTTCCTGCCGGCACACGAGGCC
GACGAGCTGCTACGGGAGCTCCTCGACGAGGCCAAGACGTTCCAGAAGTCGACGTTTAAGCTCTTTGACCAGGTG
GTGTCGAGTCGGCACACGTCGAGCTTCTACGTGGAGAGCTACGAAGCCTTGCAGGGGCAAAAGGCCGACTACTAC
TACAATGGGTCCAAGCTGACGGACGTGCGGCCCATTACGCGGCAGCTCAGCAATGTCAAGCCCGTGGTGCAAATG
GCTGTCAACTCGGAAATGGAGCGTCGCATCAGGACGCGCTATCCCGGGGGCCAGAAACTCAAGCACCAATCGGGC
GACGAATGGGTGCCCAACATGGCCTTTGTCAACTGCTACCAGGGCGGCGACGAGAGCGTGGGCTGGCACAGCGAC
CAACTGACGTATCTGGGCCCACGGGCCGTCATTGGCTCGCTGTCGCTGGGCGTGGCGCGCGAGTTTCGCGTACGG
CGAGTGTGTCCCGCATCGGGCGAGGCCGCGGGCCAGATAGCCATTCACCTGCCTCACAATTCGCTGCTCGTCATG
CACGCCGAGATGCAGGAGGAGTGGAAGCATTGCGTGGCCCCCGCCGCGTCAATAGACCCGCACCCGGTGGCGGGC
AACAGGCGCATCAACATCACCTACCGGCATTACCGCGACTACATGCATCCGCGCCACACGCCACGCTGCTCCTGT
GCCGTGCCCTGTGTGTTGCGCGTTGTGCAAAAGAGGCCGGGCAACCAGGGCCGGTACTTTTGGATGTGCCACGCC
GGCAACGTGCCGGGGAAGCAGGCCTGTTGCTTTTTCCAATGGGCCGAGTTTGACTGTCATGGGAAGCCACTGCTG
CCCAGCGAGCCGTCGGCGTGCAACAAGAAAGCCGAGGCCGCAATGGAGCCAACTCGCGTGGAGCCAAGAGACGGC
TGA
Transcript >OphauG2|122
ATGCAAGACGAAACAACCGAAGTAAAGGTGGCGCTGCTTGCGTCGCTCCATGGCGACGTTGACCACGAAACGCTT
CTCAATCTTATTGTGGCACACAATGGCTCCGTCAGTCAGGCGTCGCTGGCTCTGCAGTCCAGGCAGGCTGGGGCG
ACGAAAGACAAAGCATCGGAAGACAAAGCATCGGAAGACAACGCATCGGGCCGCCGCCAGCAGTCCCTCAAGCGA
TACGCAACGGCTTCCGACAATGGGCATGGGGCCAAGAAGCCGAATGTGAGGTGGAAAAAGGGAAGCACGCTGCAC
CTTTACGATGCCGACGACGTGTCCCAACACACGCCATGCAGCATTATCCACAACTTCCTGCCGGCACACGAGGCC
GACGAGCTGCTACGGGAGCTCCTCGACGAGGCCAAGACGTTCCAGAAGTCGACGTTTAAGCTCTTTGACCAGGTG
GTGTCGAGTCGGCACACGTCGAGCTTCTACGTGGAGAGCTACGAAGCCTTGCAGGGGCAAAAGGCCGACTACTAC
TACAATGGGTCCAAGCTGACGGACGTGCGGCCCATTACGCGGCAGCTCAGCAATGTCAAGCCCGTGGTGCAAATG
GCTGTCAACTCGGAAATGGAGCGTCGCATCAGGACGCGCTATCCCGGGGGCCAGAAACTCAAGCACCAATCGGGC
GACGAATGGGTGCCCAACATGGCCTTTGTCAACTGCTACCAGGGCGGCGACGAGAGCGTGGGCTGGCACAGCGAC
CAACTGACGTATCTGGGCCCACGGGCCGTCATTGGCTCGCTGTCGCTGGGCGTGGCGCGCGAGTTTCGCGTACGG
CGAGTGTGTCCCGCATCGGGCGAGGCCGCGGGCCAGATAGCCATTCACCTGCCTCACAATTCGCTGCTCGTCATG
CACGCCGAGATGCAGGAGGAGTGGAAGCATTGCGTGGCCCCCGCCGCGTCAATAGACCCGCACCCGGTGGCGGGC
AACAGGCGCATCAACATCACCTACCGGCATTACCGCGACTACATGCATCCGCGCCACACGCCACGCTGCTCCTGT
GCCGTGCCCTGTGTGTTGCGCGTTGTGCAAAAGAGGCCGGGCAACCAGGGCCGGTACTTTTGGATGTGCCACGCC
GGCAACGTGCCGGGGAAGCAGGCCTGTTGCTTTTTCCAATGGGCCGAGTTTGACTGTCATGGGAAGCCACTGCTG
CCCAGCGAGCCGTCGGCGTGCAACAAGAAAGCCGAGGCCGCAATGGAGCCAACTCGCGTGGAGCCAAGAGACGGC
TGA
Gene >OphauG2|122
ATGCAAGACGAAACAACCGAAGTAAAGGTGGCGCTGCTTGCGTCGCTCCATGGCGACGTTGACCACGAAACGCTT
CTCAATCTTATTGTGGCACACAATGGCTCCGTCAGTCAGGCGTCGCTGGCTCTGCAGTCCAGGCAGGCTGGGGCG
ACGAAAGACAAAGCATCGGAAGACAAAGCATCGGAAGACAACGCATCGGGCCGCCGCCAGCAGTCCCTCAAGCGA
TACGCAACGGCTTCCGACAATGGGCATGGGGCCAAGAAGCCGAATGTGAGGTGGAAAAAGGGAAGCACGCTGCAC
CTTTACGATGCCGACGACGTGTCCCAACACACGCCATGCAGCATTATCCACAACTTCCTGCCGGCACACGAGGCC
GACGAGCTGCTACGGGAGCTCCTCGACGAGGCCAAGACGTTCCAGAAGTCGACGTTTAAGCTCTTTGACCAGGTG
GTGTCGAGTCGGCACACGTCGAGCTTCTACGTGGAGAGCTACGAAGCCTTGCAGGGGCAAAAGGCCGACTACTAC
TACAATGGGTCCAAGCTGACGGCAAGTGGTTGTCTTGGGGCCAAGACTCAACCCCATGATGCAACATGTCGCAAA
TTGGGCGAGAGGCTGACTGGCGGCGGCGCAGGACGTGCGGCCCATTACGCGGCAGCTCAGCAATGTCAAGCCCGT
GGTGCAAATGGCTGTCAACTCGGAAATGGAGCGTCGCATCAGGACGCGCTATCCCGGGGGCCAGAAACTCAAGCA
CCAATCGGGCGACGAATGGGTGCCCAACATGGCCTTTGTCAACTGCTACCAGGGCGGCGACGAGAGCGTGGGCTG
GCACAGCGACCAACTGACGTATCTGGGCCCACGGGCCGTCATTGGCTCGCTGTCGCTGGGCGTGGCGCGCGAGTT
TCGCGTACGGCGAGTGTGTCCCGCATCGGGCGAGGCCGCGGGCCAGATAGCCATTCACCTGCCTCACAATTCGCT
GCTCGTCATGCACGCCGAGATGCAGGAGGAGTGGAAGCATTGCGTGGCCCCCGCCGCGTCAATAGACCCGCACCC
GGTGGCGGGCAACAGGCGCATCAACATCACCTACCGGCATTACCGCGACTACATGCATCCGCGCCACACGCCACG
CTGCTCCTGTGCCGTGCCCTGTGTGTTGCGCGTTGTGCAAAAGAGGCCGGGCAACCAGGGCCGGTACTTTTGGAT
GTGCCACGCCGGCAACGTGCCGGGGAAGCAGGCCTGTTGCTTTTTCCAATGGGCCGAGTTTGACTGTCATGGGAA
GCCACTGCTGCCCAGCGAGCCGTCGGCGTGCAACAAGAAAGCCGAGGCCGCAATGGAGCCAACTCGCGTGGAGCC
AAGAGACGGCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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