Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|115
Gene name
LocationContig_101:26767..27778
Strand+
Gene length (bp)1011
Transcript length (bp)1011
Coding sequence length (bp)1011
Protein length (aa) 337

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13621 Cupin_8 Cupin-like domain 7.2E-27 159 336

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|Q54FG7|JMJCF_DICDI JmjC domain-containing protein F OS=Dictyostelium discoideum GN=jcdF PE=3 SV=1 177 319 2.0E-13
sp|Q8RWR1|JMJ30_ARATH Putative lysine-specific demethylase JMJD5 OS=Arabidopsis thaliana GN=JMJD5 PE=2 SV=1 156 334 6.0E-12
sp|B5XF11|KDM8_SALSA Lysine-specific demethylase 8 OS=Salmo salar GN=kdm8 PE=2 SV=1 156 334 2.0E-11
sp|A8E534|KDM8_DANRE Lysine-specific demethylase 8 OS=Danio rerio GN=kdm8 PE=2 SV=1 177 334 3.0E-10
sp|B2GUS6|KDM8_XENTR Lysine-specific demethylase 8 OS=Xenopus tropicalis GN=kdm8 PE=2 SV=1 156 334 6.0E-09
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q54FG7|JMJCF_DICDI JmjC domain-containing protein F OS=Dictyostelium discoideum GN=jcdF PE=3 SV=1 177 319 2.0E-13
sp|Q8RWR1|JMJ30_ARATH Putative lysine-specific demethylase JMJD5 OS=Arabidopsis thaliana GN=JMJD5 PE=2 SV=1 156 334 6.0E-12
sp|B5XF11|KDM8_SALSA Lysine-specific demethylase 8 OS=Salmo salar GN=kdm8 PE=2 SV=1 156 334 2.0E-11
sp|A8E534|KDM8_DANRE Lysine-specific demethylase 8 OS=Danio rerio GN=kdm8 PE=2 SV=1 177 334 3.0E-10
sp|B2GUS6|KDM8_XENTR Lysine-specific demethylase 8 OS=Xenopus tropicalis GN=kdm8 PE=2 SV=1 156 334 6.0E-09
sp|Q55DF5|JMJCD_DICDI JmjC domain-containing protein D OS=Dictyostelium discoideum GN=jcdD PE=3 SV=1 177 320 8.0E-09
sp|Q8N371|KDM8_HUMAN Lysine-specific demethylase 8 OS=Homo sapiens GN=KDM8 PE=1 SV=1 177 334 3.0E-08
sp|P0C872|JMJD7_MOUSE JmjC domain-containing protein 7 OS=Mus musculus GN=Jmjd7 PE=1 SV=1 185 335 6.0E-08
sp|Q1JP61|KDM8_BOVIN Lysine-specific demethylase 8 OS=Bos taurus GN=KDM8 PE=2 SV=1 165 334 7.0E-08
sp|P0C870|JMJD7_HUMAN JmjC domain-containing protein 7 OS=Homo sapiens GN=JMJD7 PE=1 SV=1 152 335 4.0E-07
sp|P59723|HIF1N_DANRE Hypoxia-inducible factor 1-alpha inhibitor OS=Danio rerio GN=hif1an PE=2 SV=2 206 336 3.0E-06
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|115
MKRLRLGHGVWQWPRRLFGTSRPHALSQVDLATPWANTQADVEAFRQNALIPNKPLLFQRGTGSPSQHLQAPDKW
FALDSTGRRVLSSWITNASLETLLPYELILQSQDMLNAVACFRDWLLGTVSITNTVLAGIVQSALDGAQAFTQLN
APLSLLIKALEFNGNQRVEKQPALELYVAQAGLEDLPHFLKDDLKVPRLLQEAGKGDVYGSSLWLGTEPTYSPLH
RDPNPNLFCQLCGGKQVRLMPPTVGHDLYLVVQTAIQQQGNSRIRSTEMMEGKERAVLHEAVWNSSHYPADMYQA
KLDPGDALFIPNGWWHSVKSTESDGQLNGSVNWWFR*
Coding >OphauG2|115
ATGAAGAGGCTGCGACTGGGCCACGGCGTCTGGCAGTGGCCGAGGCGTCTCTTTGGCACCTCCAGGCCCCACGCG
CTGTCACAAGTAGACTTGGCCACCCCGTGGGCCAATACACAGGCAGACGTTGAAGCCTTTCGACAAAATGCTCTG
ATTCCTAACAAACCTCTGCTGTTCCAGAGGGGAACAGGATCCCCAAGTCAGCATCTTCAGGCCCCAGACAAGTGG
TTTGCTCTAGATTCCACCGGCAGGCGTGTTCTGTCTTCCTGGATAACCAACGCCTCGCTTGAAACACTGCTTCCT
TACGAATTGATCCTGCAGTCACAGGACATGTTGAACGCTGTTGCGTGCTTTCGCGACTGGCTCTTGGGAACTGTC
TCCATCACCAATACGGTTCTAGCAGGCATCGTACAATCAGCCCTCGATGGAGCCCAAGCCTTCACTCAACTAAAT
GCCCCGCTGAGCCTCCTCATAAAAGCCCTTGAATTCAACGGGAATCAAAGGGTCGAGAAACAGCCCGCCTTGGAG
CTCTACGTAGCTCAAGCTGGGCTTGAAGACTTGCCACACTTTCTCAAAGACGACCTCAAAGTACCTCGACTGTTG
CAGGAAGCTGGAAAAGGCGACGTGTACGGCTCTTCGCTCTGGCTTGGTACCGAGCCGACCTACTCACCCCTCCAT
AGAGATCCGAACCCAAATCTCTTTTGCCAACTATGCGGTGGCAAACAAGTCAGGCTTATGCCCCCGACAGTGGGA
CATGATTTGTACCTTGTTGTGCAGACAGCCATTCAACAGCAGGGAAACAGCCGCATCCGCTCCACCGAGATGATG
GAGGGCAAGGAGAGGGCAGTGCTACACGAGGCCGTTTGGAATAGCAGCCACTACCCAGCCGACATGTACCAAGCA
AAACTAGACCCTGGTGACGCTTTATTCATTCCAAATGGGTGGTGGCACTCAGTAAAGAGCACCGAATCTGACGGT
CAGCTCAATGGCTCCGTCAACTGGTGGTTTCGATGA
Transcript >OphauG2|115
ATGAAGAGGCTGCGACTGGGCCACGGCGTCTGGCAGTGGCCGAGGCGTCTCTTTGGCACCTCCAGGCCCCACGCG
CTGTCACAAGTAGACTTGGCCACCCCGTGGGCCAATACACAGGCAGACGTTGAAGCCTTTCGACAAAATGCTCTG
ATTCCTAACAAACCTCTGCTGTTCCAGAGGGGAACAGGATCCCCAAGTCAGCATCTTCAGGCCCCAGACAAGTGG
TTTGCTCTAGATTCCACCGGCAGGCGTGTTCTGTCTTCCTGGATAACCAACGCCTCGCTTGAAACACTGCTTCCT
TACGAATTGATCCTGCAGTCACAGGACATGTTGAACGCTGTTGCGTGCTTTCGCGACTGGCTCTTGGGAACTGTC
TCCATCACCAATACGGTTCTAGCAGGCATCGTACAATCAGCCCTCGATGGAGCCCAAGCCTTCACTCAACTAAAT
GCCCCGCTGAGCCTCCTCATAAAAGCCCTTGAATTCAACGGGAATCAAAGGGTCGAGAAACAGCCCGCCTTGGAG
CTCTACGTAGCTCAAGCTGGGCTTGAAGACTTGCCACACTTTCTCAAAGACGACCTCAAAGTACCTCGACTGTTG
CAGGAAGCTGGAAAAGGCGACGTGTACGGCTCTTCGCTCTGGCTTGGTACCGAGCCGACCTACTCACCCCTCCAT
AGAGATCCGAACCCAAATCTCTTTTGCCAACTATGCGGTGGCAAACAAGTCAGGCTTATGCCCCCGACAGTGGGA
CATGATTTGTACCTTGTTGTGCAGACAGCCATTCAACAGCAGGGAAACAGCCGCATCCGCTCCACCGAGATGATG
GAGGGCAAGGAGAGGGCAGTGCTACACGAGGCCGTTTGGAATAGCAGCCACTACCCAGCCGACATGTACCAAGCA
AAACTAGACCCTGGTGACGCTTTATTCATTCCAAATGGGTGGTGGCACTCAGTAAAGAGCACCGAATCTGACGGT
CAGCTCAATGGCTCCGTCAACTGGTGGTTTCGATGA
Gene >OphauG2|115
ATGAAGAGGCTGCGACTGGGCCACGGCGTCTGGCAGTGGCCGAGGCGTCTCTTTGGCACCTCCAGGCCCCACGCG
CTGTCACAAGTAGACTTGGCCACCCCGTGGGCCAATACACAGGCAGACGTTGAAGCCTTTCGACAAAATGCTCTG
ATTCCTAACAAACCTCTGCTGTTCCAGAGGGGAACAGGATCCCCAAGTCAGCATCTTCAGGCCCCAGACAAGTGG
TTTGCTCTAGATTCCACCGGCAGGCGTGTTCTGTCTTCCTGGATAACCAACGCCTCGCTTGAAACACTGCTTCCT
TACGAATTGATCCTGCAGTCACAGGACATGTTGAACGCTGTTGCGTGCTTTCGCGACTGGCTCTTGGGAACTGTC
TCCATCACCAATACGGTTCTAGCAGGCATCGTACAATCAGCCCTCGATGGAGCCCAAGCCTTCACTCAACTAAAT
GCCCCGCTGAGCCTCCTCATAAAAGCCCTTGAATTCAACGGGAATCAAAGGGTCGAGAAACAGCCCGCCTTGGAG
CTCTACGTAGCTCAAGCTGGGCTTGAAGACTTGCCACACTTTCTCAAAGACGACCTCAAAGTACCTCGACTGTTG
CAGGAAGCTGGAAAAGGCGACGTGTACGGCTCTTCGCTCTGGCTTGGTACCGAGCCGACCTACTCACCCCTCCAT
AGAGATCCGAACCCAAATCTCTTTTGCCAACTATGCGGTGGCAAACAAGTCAGGCTTATGCCCCCGACAGTGGGA
CATGATTTGTACCTTGTTGTGCAGACAGCCATTCAACAGCAGGGAAACAGCCGCATCCGCTCCACCGAGATGATG
GAGGGCAAGGAGAGGGCAGTGCTACACGAGGCCGTTTGGAATAGCAGCCACTACCCAGCCGACATGTACCAAGCA
AAACTAGACCCTGGTGACGCTTTATTCATTCCAAATGGGTGGTGGCACTCAGTAAAGAGCACCGAATCTGACGGT
CAGCTCAATGGCTCCGTCAACTGGTGGTTTCGATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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