© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | OphauG2|1139 |
| Gene name | |
| Location | Contig_132:3415..4089 |
| Strand | - |
| Gene length (bp) | 674 |
| Transcript length (bp) | 549 |
| Coding sequence length (bp) | 549 |
| Protein length (aa) | 183 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF04061 | ORMDL | ORMDL family | 1.3E-58 | 38 | 172 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O42901|YBA9_SCHPO | Uncharacterized protein C119.09c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC119.09c PE=2 SV=3 | 23 | 175 | 7.0E-62 |
| sp|P53224|ORM1_YEAST | Protein ORM1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ORM1 PE=1 SV=1 | 21 | 175 | 4.0E-61 |
| sp|Q96495|ORM1_SACMO | Protein ORM1 OS=Saccharomyces pastorianus (strain ATCC 76670 / Carlsberg bottom yeast no.2 / CBS 1503 / CLIB 180 / NBRC 10610 / NRRL Y-1525) GN=ORM1 PE=4 SV=1 | 39 | 175 | 1.0E-55 |
| sp|Q06144|ORM2_YEAST | Protein ORM2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ORM2 PE=1 SV=1 | 19 | 175 | 6.0E-52 |
| sp|Q6QI25|ORML3_RAT | ORM1-like protein 3 OS=Rattus norvegicus GN=Ormdl3 PE=2 SV=2 | 38 | 175 | 4.0E-29 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O42901|YBA9_SCHPO | Uncharacterized protein C119.09c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC119.09c PE=2 SV=3 | 23 | 175 | 7.0E-62 |
| sp|P53224|ORM1_YEAST | Protein ORM1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ORM1 PE=1 SV=1 | 21 | 175 | 4.0E-61 |
| sp|Q96495|ORM1_SACMO | Protein ORM1 OS=Saccharomyces pastorianus (strain ATCC 76670 / Carlsberg bottom yeast no.2 / CBS 1503 / CLIB 180 / NBRC 10610 / NRRL Y-1525) GN=ORM1 PE=4 SV=1 | 39 | 175 | 1.0E-55 |
| sp|Q06144|ORM2_YEAST | Protein ORM2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ORM2 PE=1 SV=1 | 19 | 175 | 6.0E-52 |
| sp|Q6QI25|ORML3_RAT | ORM1-like protein 3 OS=Rattus norvegicus GN=Ormdl3 PE=2 SV=2 | 38 | 175 | 4.0E-29 |
| sp|Q9CPZ6|ORML3_MOUSE | ORM1-like protein 3 OS=Mus musculus GN=Ormdl3 PE=2 SV=1 | 38 | 175 | 5.0E-29 |
| sp|Q8N138|ORML3_HUMAN | ORM1-like protein 3 OS=Homo sapiens GN=ORMDL3 PE=1 SV=1 | 38 | 175 | 7.0E-29 |
| sp|Q0VD15|ORML3_BOVIN | ORM1-like protein 3 OS=Bos taurus GN=ORMDL3 PE=2 SV=1 | 38 | 175 | 7.0E-29 |
| sp|Q53FV1|ORML2_HUMAN | ORM1-like protein 2 OS=Homo sapiens GN=ORMDL2 PE=1 SV=2 | 38 | 175 | 1.0E-28 |
| sp|Q5R570|ORML3_PONAB | ORM1-like protein 3 OS=Pongo abelii GN=ORMDL3 PE=2 SV=1 | 38 | 175 | 1.0E-28 |
| sp|D2I2F3|ORML3_AILME | ORM1-like protein 3 OS=Ailuropoda melanoleuca GN=ORMDL3 PE=3 SV=1 | 38 | 175 | 2.0E-28 |
| sp|Q5XJR6|ORML3_DANRE | ORM1-like protein 3 OS=Danio rerio GN=ormdl3 PE=2 SV=1 | 38 | 175 | 5.0E-28 |
| sp|Q8JFB7|ORML1_DANRE | ORM1-like protein 1 OS=Danio rerio GN=ormdl1 PE=2 SV=1 | 38 | 175 | 8.0E-28 |
| sp|Q5XH57|ORML1_XENLA | ORM1-like protein 1 OS=Xenopus laevis GN=ormdl1 PE=2 SV=1 | 38 | 175 | 9.0E-27 |
| sp|Q29RQ9|ORML1_BOVIN | ORM1-like protein 1 OS=Bos taurus GN=ORMDL1 PE=2 SV=1 | 38 | 175 | 1.0E-26 |
| sp|Q921I0|ORML1_MOUSE | ORM1-like protein 1 OS=Mus musculus GN=Ormdl1 PE=2 SV=1 | 38 | 175 | 2.0E-26 |
| sp|Q5ZIU0|ORML2_CHICK | ORM1-like protein 2 OS=Gallus gallus GN=ORMDL2 PE=2 SV=1 | 38 | 175 | 2.0E-26 |
| sp|Q5R8X5|ORML1_PONAB | ORM1-like protein 1 OS=Pongo abelii GN=ORMDL1 PE=2 SV=1 | 38 | 175 | 3.0E-26 |
| sp|Q9P0S3|ORML1_HUMAN | ORM1-like protein 1 OS=Homo sapiens GN=ORMDL1 PE=1 SV=1 | 38 | 175 | 3.0E-26 |
| sp|Q9CQZ0|ORML2_MOUSE | ORM1-like protein 2 OS=Mus musculus GN=Ormdl2 PE=1 SV=1 | 38 | 175 | 4.0E-26 |
| sp|Q5E972|ORML2_BOVIN | ORM1-like protein 2 OS=Bos taurus GN=ORMDL2 PE=2 SV=1 | 38 | 175 | 2.0E-25 |
| sp|Q9VP04|ORMDL_DROME | ORM1-like protein OS=Drosophila melanogaster GN=ORMDL PE=1 SV=1 | 27 | 173 | 5.0E-21 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005789 | endoplasmic reticulum membrane | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0016020 | membrane | No |
| GO:0031090 | organelle membrane | No |
| GO:0005575 | cellular_component | No |
| GO:0110165 | cellular anatomical entity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 12 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 127 | 144 | 17 |
| 2 | 148 | 167 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|1139 MADRDNTARRRRSSSILQVYHEPPETLEQISDQASLPNLNANWTNAKGAWTIHIVLIACLKIFYDVIPGVSQETS WTLTNMTYMFGSYLMFHYVRGVPFEFNSGAFDNLNMWEQIDNGAQYTPTKKFLLSVPIVLFLLSTHYTHYDLAYF IINFLAVLGVIIPKLPFSHRMRFGLFSGPPEA* |
| Coding | >OphauG2|1139 ATGGCAGACCGCGATAATACTGCTCGGCGGAGAAGATCGAGTAGCATCCTGCAGGTTTACCACGAGCCACCAGAG ACACTCGAACAAATCAGCGATCAGGCCTCTCTGCCCAATCTCAATGCCAATTGGACCAATGCTAAAGGGGCATGG ACCATTCACATAGTCTTGATTGCCTGCTTAAAAATCTTCTACGACGTTATTCCCGGCGTCTCACAGGAGACCTCT TGGACTCTCACAAACATGACGTACATGTTTGGCTCCTACCTCATGTTTCATTACGTCCGCGGTGTTCCCTTTGAA TTCAACAGCGGCGCTTTTGACAATCTCAACATGTGGGAGCAGATTGACAACGGAGCTCAATACACCCCTACAAAG AAGTTTCTCCTCAGCGTACCCATTGTGCTCTTTCTTCTAAGCACCCATTACACCCATTACGACCTGGCATACTTC ATCATCAATTTTCTGGCTGTCCTGGGCGTTATTATTCCCAAGTTGCCCTTTAGCCACCGTATGCGGTTCGGACTC TTCTCGGGTCCGCCAGAGGCTTGA |
| Transcript | >OphauG2|1139 ATGGCAGACCGCGATAATACTGCTCGGCGGAGAAGATCGAGTAGCATCCTGCAGGTTTACCACGAGCCACCAGAG ACACTCGAACAAATCAGCGATCAGGCCTCTCTGCCCAATCTCAATGCCAATTGGACCAATGCTAAAGGGGCATGG ACCATTCACATAGTCTTGATTGCCTGCTTAAAAATCTTCTACGACGTTATTCCCGGCGTCTCACAGGAGACCTCT TGGACTCTCACAAACATGACGTACATGTTTGGCTCCTACCTCATGTTTCATTACGTCCGCGGTGTTCCCTTTGAA TTCAACAGCGGCGCTTTTGACAATCTCAACATGTGGGAGCAGATTGACAACGGAGCTCAATACACCCCTACAAAG AAGTTTCTCCTCAGCGTACCCATTGTGCTCTTTCTTCTAAGCACCCATTACACCCATTACGACCTGGCATACTTC ATCATCAATTTTCTGGCTGTCCTGGGCGTTATTATTCCCAAGTTGCCCTTTAGCCACCGTATGCGGTTCGGACTC TTCTCGGGTCCGCCAGAGGCTTGA |
| Gene | >OphauG2|1139 ATGGCAGACCGCGATAATACTGCTCGGCGGAGAAGATCGAGTAGCATCCTGCAGGTTTACCACGAGCCACCAGAG ACACTCGAACAAATCAGCGATCAGGCCTCTCTGCCCAATCTCAATGCCAATTGGACCAATGCTAAAGGTATTTGG CTGACCCTGCCCATGATGCGCCCCAACCACACTAGACTTTTTGCTGACGCTCAATTCCAGGGGCATGGACCATTC ACATAGTCTTGATTGCCTGCTTAAAAATCTTCTACGACGTTATTCCCGGCGTCTCACAGGAGACCTCTTGGACTC TCACAAACATGACGTACATGTTTGGCTCCTACCTCATGTTTCATTACGTCCGCGGTGTTCCCTTTGAATTCAACA GCGGCGCTTTTGACAATCTCAACATGTGGGAGCAGATTGACAACGGAGCTCAATACACCCCTACAAAGAAGTTTC TCCTCAGCGTACCCATTGTGCTCTTTCTTCTAAGCACCCATTACACCCATTACGACCTGGCATACTTCATCATCA ATTTTCTGGCTGTCCTGGGCGTTATTATTCCCAAGTTGCCCTTTGTGCGTACTTGCTCCGTGGCCATGGCATAGC GCAAGTCAAGCTAACTATATGCCCAGAGCCACCGTATGCGGTTCGGACTCTTCTCGGGTCCGCCAGAGGCTTGA |