© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|1101 |
| Gene name | |
| Location | Contig_1301:1931..3728 |
| Strand | + |
| Gene length (bp) | 1797 |
| Transcript length (bp) | 1527 |
| Coding sequence length (bp) | 1527 |
| Protein length (aa) | 509 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF10355 | Ytp1 | Protein of unknown function (Ytp1) | 1.4E-117 | 199 | 484 |
| PF10348 | DUF2427 | Domain of unknown function (DUF2427) | 4.3E-20 | 1 | 79 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O59714|YBH6_SCHPO | Uncharacterized membrane protein C3B8.06 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC3B8.06 PE=1 SV=1 | 1 | 488 | 2.0E-86 |
| sp|P25639|YCV1_YEAST | Uncharacterized membrane protein YCR061W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCR061W PE=1 SV=2 | 200 | 486 | 5.0E-66 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 21 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 2 | 24 | 22 |
| 2 | 60 | 82 | 22 |
| 3 | 194 | 216 | 22 |
| 4 | 231 | 253 | 22 |
| 5 | 265 | 287 | 22 |
| 6 | 302 | 324 | 22 |
| 7 | 359 | 378 | 19 |
| 8 | 393 | 415 | 22 |
| 9 | 428 | 445 | 17 |
| 10 | 460 | 482 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|1101 MTFAWVVILPVAVMLSLVGSRFTIHWQSVFTITHVVGLLFVIMYKADTPDLYPHNAHYKIGWIATGLVPAQMVIG LAEHMAASLRRRSLRRAHLASAEERCYFIPDGEYRISSESCHNIESNTDALPSSWDTTLQAREQDLDKECDSSNP QLSRSKLSLYRMRISRQLAVTVTWLVSSRTWWCFDLLYRITDRIILPFGFAVVTTGIATFGRFFEGHAIFSGLAH WIKGGVFFWLGLFTLGRWCGSFAELGWAWNARPRARRTKWYPSIEFVESALIFLYGSTNIFLEHLGRWGGDWTAQ DLQHLAITILFIGGGLCGMLVESAFIRRLLNMTASQVSVVPIHDESVHEERQQPDTYQFSLNPIPALVILMVGVI MSSHHQSSHISTTVHKQWGNLLLGASFARTLTYILIYLRPPKSTLPSRPPTELLAAFGLIAGGIIFMASSSDTIQ AIIDHDLDAMFIYTITMGLVALLMAWEVLVLASKGWAAHCERRLIPSQSPVNHLQGSP* |
| Coding | >OphauG2|1101 ATGACGTTTGCTTGGGTCGTTATTCTACCCGTCGCTGTGATGCTATCACTCGTAGGGTCTCGCTTCACAATACAC TGGCAATCCGTCTTTACAATTACTCATGTCGTCGGTCTCTTATTCGTCATTATGTACAAGGCCGACACACCAGAT CTGTACCCTCACAATGCCCATTATAAGATTGGCTGGATTGCTACAGGGCTTGTGCCGGCGCAAATGGTAATTGGT TTGGCAGAGCATATGGCCGCATCTTTGCGCAGGCGTTCTTTGCGTCGTGCTCACTTGGCCAGCGCTGAAGAGAGA TGCTACTTTATACCAGATGGCGAATATCGCATTTCCAGTGAAAGTTGCCACAATATCGAGTCTAACACCGACGCC CTACCCAGTAGCTGGGACACCACCCTGCAGGCCCGTGAGCAAGACTTGGACAAGGAATGCGATTCCAGTAATCCC CAACTATCGCGAAGCAAATTGAGCTTATATCGGATGCGTATATCAAGGCAGCTGGCTGTCACGGTGACTTGGCTC GTTTCCTCGCGGACTTGGTGGTGTTTCGACCTGTTGTATCGCATTACTGATCGTATAATTTTGCCCTTTGGCTTC GCCGTCGTTACCACTGGCATCGCCACGTTCGGTCGCTTCTTTGAGGGCCACGCAATATTTAGTGGATTGGCCCAT TGGATCAAAGGAGGCGTCTTTTTCTGGCTAGGTCTTTTCACTCTTGGTCGCTGGTGTGGCAGTTTTGCCGAGCTA GGCTGGGCTTGGAACGCTCGTCCACGAGCAAGACGTACCAAGTGGTATCCATCGATTGAGTTCGTTGAGAGCGCG CTTATCTTCCTATATGGCTCCACAAACATATTTCTCGAGCACTTAGGCCGCTGGGGTGGTGATTGGACTGCACAG GACTTGCAGCATCTTGCCATCACTATACTCTTTATTGGTGGCGGTCTGTGCGGCATGCTAGTCGAGTCGGCTTTT ATTCGCAGATTGCTCAATATGACTGCATCCCAGGTATCAGTGGTACCTATTCATGATGAATCGGTCCACGAGGAA CGGCAGCAACCGGACACATATCAATTTTCTTTGAATCCCATTCCGGCCCTCGTTATTCTAATGGTGGGCGTCATA ATGAGCTCTCATCACCAGTCTTCCCATATTTCAACTACCGTTCACAAACAGTGGGGAAATCTCCTGCTTGGTGCT TCGTTTGCTCGAACACTCACATATATTCTCATCTATCTGCGCCCACCTAAATCCACCCTACCATCTAGACCTCCC ACTGAGCTCTTGGCTGCTTTTGGTCTTATCGCTGGGGGCATTATTTTCATGGCAAGCAGCTCCGACACAATACAG GCCATAATAGATCACGACCTAGACGCAATGTTTATCTATACGATAACAATGGGCCTTGTTGCATTGCTCATGGCT TGGGAGGTCCTTGTGTTGGCTTCAAAGGGCTGGGCTGCTCACTGCGAGAGAAGACTTATCCCATCACAATCTCCA GTCAACCATCTCCAAGGTTCACCTTAA |
| Transcript | >OphauG2|1101 ATGACGTTTGCTTGGGTCGTTATTCTACCCGTCGCTGTGATGCTATCACTCGTAGGGTCTCGCTTCACAATACAC TGGCAATCCGTCTTTACAATTACTCATGTCGTCGGTCTCTTATTCGTCATTATGTACAAGGCCGACACACCAGAT CTGTACCCTCACAATGCCCATTATAAGATTGGCTGGATTGCTACAGGGCTTGTGCCGGCGCAAATGGTAATTGGT TTGGCAGAGCATATGGCCGCATCTTTGCGCAGGCGTTCTTTGCGTCGTGCTCACTTGGCCAGCGCTGAAGAGAGA TGCTACTTTATACCAGATGGCGAATATCGCATTTCCAGTGAAAGTTGCCACAATATCGAGTCTAACACCGACGCC CTACCCAGTAGCTGGGACACCACCCTGCAGGCCCGTGAGCAAGACTTGGACAAGGAATGCGATTCCAGTAATCCC CAACTATCGCGAAGCAAATTGAGCTTATATCGGATGCGTATATCAAGGCAGCTGGCTGTCACGGTGACTTGGCTC GTTTCCTCGCGGACTTGGTGGTGTTTCGACCTGTTGTATCGCATTACTGATCGTATAATTTTGCCCTTTGGCTTC GCCGTCGTTACCACTGGCATCGCCACGTTCGGTCGCTTCTTTGAGGGCCACGCAATATTTAGTGGATTGGCCCAT TGGATCAAAGGAGGCGTCTTTTTCTGGCTAGGTCTTTTCACTCTTGGTCGCTGGTGTGGCAGTTTTGCCGAGCTA GGCTGGGCTTGGAACGCTCGTCCACGAGCAAGACGTACCAAGTGGTATCCATCGATTGAGTTCGTTGAGAGCGCG CTTATCTTCCTATATGGCTCCACAAACATATTTCTCGAGCACTTAGGCCGCTGGGGTGGTGATTGGACTGCACAG GACTTGCAGCATCTTGCCATCACTATACTCTTTATTGGTGGCGGTCTGTGCGGCATGCTAGTCGAGTCGGCTTTT ATTCGCAGATTGCTCAATATGACTGCATCCCAGGTATCAGTGGTACCTATTCATGATGAATCGGTCCACGAGGAA CGGCAGCAACCGGACACATATCAATTTTCTTTGAATCCCATTCCGGCCCTCGTTATTCTAATGGTGGGCGTCATA ATGAGCTCTCATCACCAGTCTTCCCATATTTCAACTACCGTTCACAAACAGTGGGGAAATCTCCTGCTTGGTGCT TCGTTTGCTCGAACACTCACATATATTCTCATCTATCTGCGCCCACCTAAATCCACCCTACCATCTAGACCTCCC ACTGAGCTCTTGGCTGCTTTTGGTCTTATCGCTGGGGGCATTATTTTCATGGCAAGCAGCTCCGACACAATACAG GCCATAATAGATCACGACCTAGACGCAATGTTTATCTATACGATAACAATGGGCCTTGTTGCATTGCTCATGGCT TGGGAGGTCCTTGTGTTGGCTTCAAAGGGCTGGGCTGCTCACTGCGAGAGAAGACTTATCCCATCACAATCTCCA GTCAACCATCTCCAAGGTTCACCTTAA |
| Gene | >OphauG2|1101 ATGACGTTTGCTTGGGTCGTTATTCTACCCGTCGGTACGATACCGATTGTCGCGTTTCTTTGGCCTCTTTGACTA ATTTTGATGTTTATCCTAGCTGTGATGCTATCACTCGTAGGGTCTCGCTTCACAATACACTGGCAATCCGTCTTT ACAATTACTCATGTCGTCGGTCTCTTATTCGTCATTATGTACAAGGCCGACACACCAGATCTGTACCCTCACAAT GCCCATTATAAGATTGGCTGGATTGCTACAGGGCTTGTGCCGGCGCAAATGGTAATTGGTTTGGCAGAGCATATG GCCGCATCTTTGCGCAGGCGTTCTTTGCGTCGTGCTCACTTGGCCAGCGCTGAAGAGAGATGCTACTTTATACCA GATGGCGAATATCGCATTTCCAGTGAAAGTTGCCACAATATCGAGTCTAACACCGACGCCCTACCCAGTAGCTGG GACACCACCCTGCAGGCCCGTGAGCAAGACTTGGACAAGGAATGCGATTCCAGTAATCCCCAACTATCGCGAAGC AAATTGAGCTTATATCGGATGCGTATATCAAGGCAGCTGGCTGTCACGGTGACTTGGCTCGTTTCCTCGCGGACT TGGTGGTGTTTCGACCTGTTGTATCGCATTACTGATCGTATAATTTTGCCCTTTGGCTTCGCCGTCGTTACCACT GGCATCGCCACGTTCGGTCGCTTCTTTGTAAGTAATATAATAGGCTTTGAAGTCCCAGCTACTGACAACGATTTT CATAGGAGGGCCACGCAATATTTAGTGGATTGGCCCATTGGATCAAAGGAGGCGTCTTTTTCTGGCTAGGTCTTT TCACTCTTGGTCGCTGGTGTGGCAGTTTTGCCGAGCTAGGCTGGGCTTGGAACGCTCGTCCACGAGCAAGACGTA CCAAGTGGTATCCATCGATTGAGTTCGTTGAGAGCGCGCTTATCTTCCTATATGGCTCCACAAACATATTTCTCG AGCACTTAGGCCGCTGGGGTGGTGATTGGACTGCACAGGACTTGCAGCATCTTGCCATCACTATACTCTTTATTG GTGGCGGTCTGGTAAGCATGTTCTCTTCTGTACTCACTTTTGTATTCAGAATGACGACGGCTTTTCTTCATCTTC CCTTCTCGGTACTGGTGCACTGACCACGATGCAGTGCGGCATGCTAGTCGAGTCGGCTTTTATTCGCAGATTGCT CAATATGACTGCATCCCAGGTATCAGTGGTACCTATTCATGATGAATCGGTCCACGAGGAACGGCAGCAACCGGA CACATATCAATTTTCTTTGAATCCCATTCCGGCCCTCGTTATTCTAATGGTGGGCGTCATAATGAGCTCTCATCA CCAGTCTTCCCATATTTCAACTACCGTTCACAAACAGTGGGGAAATCTCCTGCTTGGTGCTTCGTTTGCTCGAAC ACTCACATATATTCTCATCTATCTGCGCCCACCTAAATCCACCCTACCATCTAGACCTCCCACTGAGCTCTTGGC TGCTTTTGGTCTTATCGCTGGGGGCATTATTTTCATGGCAAGCGTAAGCCAAGGCTTATGATACTTCAAGCTGTT AACTTGTTGCTAATGACTTGTCGCTAGAGCTCCGACACAATACAGGCCATAATAGATCACGACCTAGACGCAATG TTTATCTATACGATAACAATGGGCCTTGTTGCATTGCTCATGGCTTGGGAGGTCCTTGTGTTGGCTTCAAAGGGC TGGGCTGCTCACTGCGAGAGAAGACTTATCCCATCACAATCTCCAGTCAACCATCTCCAAGGTTCACCTTAA |