© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|110 |
| Gene name | |
| Location | Contig_101:10981..12591 |
| Strand | + |
| Gene length (bp) | 1610 |
| Transcript length (bp) | 1251 |
| Coding sequence length (bp) | 1251 |
| Protein length (aa) | 417 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00649 | Copper-fist | Copper fist DNA binding domain | 5.8E-22 | 1 | 39 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P45815|CRF1_YARLI | Copper resistance protein CRF1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=CRF1 PE=3 SV=1 | 1 | 99 | 1.0E-23 |
| sp|P15315|CUP2_YEAST | Transcriptional activator protein CUP2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CUP2 PE=1 SV=1 | 1 | 98 | 9.0E-18 |
| sp|Q09728|CUF1_SCHPO | Metal-binding regulatory protein cuf1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cuf1 PE=1 SV=1 | 1 | 67 | 6.0E-16 |
| sp|Q12753|HAA1_YEAST | Transcriptional activator HAA1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HAA1 PE=1 SV=1 | 1 | 91 | 1.0E-15 |
| sp|P41772|AMT1_CANGA | Metal-activated transcriptional activator protein AMT1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=AMT1 PE=1 SV=1 | 1 | 97 | 2.0E-14 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P45815|CRF1_YARLI | Copper resistance protein CRF1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=CRF1 PE=3 SV=1 | 1 | 99 | 1.0E-23 |
| sp|P15315|CUP2_YEAST | Transcriptional activator protein CUP2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CUP2 PE=1 SV=1 | 1 | 98 | 9.0E-18 |
| sp|Q09728|CUF1_SCHPO | Metal-binding regulatory protein cuf1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cuf1 PE=1 SV=1 | 1 | 67 | 6.0E-16 |
| sp|Q12753|HAA1_YEAST | Transcriptional activator HAA1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HAA1 PE=1 SV=1 | 1 | 91 | 1.0E-15 |
| sp|P41772|AMT1_CANGA | Metal-activated transcriptional activator protein AMT1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=AMT1 PE=1 SV=1 | 1 | 97 | 2.0E-14 |
| sp|O94588|CUF2_SCHPO | Copper-binding regulatory protein cuf2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cuf2 PE=2 SV=1 | 1 | 60 | 8.0E-11 |
| sp|Q5AFK0|MAC1_CANAL | Metal-binding activator 1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=MAC1 PE=2 SV=1 | 1 | 38 | 3.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0003677 | DNA binding | Yes |
| GO:0006355 | regulation of transcription, DNA-templated | Yes |
| GO:0003700 | DNA-binding transcription factor activity | Yes |
| GO:0005507 | copper ion binding | Yes |
| GO:0003676 | nucleic acid binding | No |
| GO:0060255 | regulation of macromolecule metabolic process | No |
| GO:0010468 | regulation of gene expression | No |
| GO:0019219 | regulation of nucleobase-containing compound metabolic process | No |
| GO:0050789 | regulation of biological process | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0046872 | metal ion binding | No |
| GO:0031323 | regulation of cellular metabolic process | No |
| GO:0043167 | ion binding | No |
| GO:0019222 | regulation of metabolic process | No |
| GO:2001141 | regulation of RNA biosynthetic process | No |
| GO:1903506 | regulation of nucleic acid-templated transcription | No |
| GO:0050794 | regulation of cellular process | No |
| GO:0080090 | regulation of primary metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0140110 | transcription regulator activity | No |
| GO:0009889 | regulation of biosynthetic process | No |
| GO:0065007 | biological regulation | No |
| GO:0005488 | binding | No |
| GO:0046914 | transition metal ion binding | No |
| GO:0003674 | molecular_function | No |
| GO:0051171 | regulation of nitrogen compound metabolic process | No |
| GO:0010556 | regulation of macromolecule biosynthetic process | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0043169 | cation binding | No |
| GO:0051252 | regulation of RNA metabolic process | No |
| GO:0031326 | regulation of cellular biosynthetic process | No |
| Orthofinder run ID | 4 |
| Orthogroup | 4733 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|110 MLINGEKFACEACVRGHRVSNCQHSDRPLQHINKKGRPVSQCQHCRTMRKSRSAHVKCDCGEKTSKCAHLQQPVQ GHKETCCCNHGGRCTCAHKKDTSLGTVPESDSDHDAQAAPHPGRPKASRRRRANTAHSADAIMSFDRNGHHKPTA KHNRSAQKSSPYQLNRVNSTQSVSSLGGSESISYHLDGDAQSSNGRSRASTLHEQRKAKSETASPLLSGSALAQL NGTLPPLDLTRIEYSSYVHNGTFEMFAASGLAENDTPMYSAGLSAASVDWSHYDLGDTKGDFAPSSYSQTGAPSF NGFVELGSGSDQPPNLTNTRSTSGNVSEVEDFVANGDDLNGLLRQNTASSISADISTIDYDSFYKGSDNPNATIA AISMVDEDPAFWMSNYNDAMAVVDESSDALAASGLGSFWDM* |
| Coding | >OphauG2|110 ATGTTGATAAACGGAGAAAAGTTTGCCTGCGAGGCCTGCGTCAGAGGACACCGCGTGAGCAATTGCCAGCACAGT GACCGCCCACTTCAACACATCAATAAAAAGGGCCGTCCAGTCTCACAATGCCAACACTGCCGCACCATGCGCAAG TCGCGCTCAGCACACGTCAAGTGCGACTGCGGCGAAAAGACGAGCAAGTGTGCCCATCTGCAACAGCCCGTCCAA GGACACAAGGAAACCTGCTGCTGCAATCATGGCGGTCGCTGCACCTGCGCCCACAAAAAGGACACCTCTCTGGGA ACCGTGCCCGAGTCCGACTCGGATCACGACGCTCAAGCCGCCCCTCACCCAGGTCGCCCTAAAGCCTCGAGAAGG AGGCGCGCCAATACGGCCCACTCTGCAGACGCCATCATGTCTTTTGATCGCAACGGCCACCACAAGCCTACCGCC AAGCATAATCGGTCTGCTCAAAAATCGAGCCCCTATCAGCTCAATCGCGTCAATTCAACACAGAGTGTCAGCAGC CTTGGGGGCTCAGAGTCCATTTCGTACCACCTGGATGGTGATGCTCAATCATCCAACGGCCGCTCCCGCGCCTCC ACGTTGCATGAACAGCGCAAAGCCAAATCCGAAACTGCCTCACCCTTACTGTCCGGGTCTGCCCTGGCCCAGCTC AACGGCACACTGCCGCCACTGGACCTGACACGCATTGAGTACTCGTCCTATGTCCACAATGGCACCTTTGAAATG TTTGCCGCCTCTGGTCTTGCAGAAAACGACACACCCATGTACAGTGCTGGCTTGAGCGCAGCTTCCGTCGACTGG AGCCACTATGACCTTGGCGATACCAAGGGCGATTTTGCCCCGTCGAGCTACAGCCAAACTGGAGCTCCGAGTTTC AACGGTTTTGTTGAATTGGGAAGTGGCTCGGACCAGCCTCCCAATCTGACCAATACAAGGTCCACGTCGGGAAAT GTATCCGAGGTTGAAGACTTTGTTGCCAATGGAGACGATCTGAACGGCCTTCTCCGTCAAAATACCGCTTCCAGT ATTTCCGCCGATATCAGCACCATTGACTACGATAGCTTCTACAAGGGCTCTGACAACCCCAATGCCACGATTGCA GCAATCTCCATGGTGGACGAGGACCCTGCTTTCTGGATGTCCAACTATAACGACGCCATGGCTGTCGTGGACGAG AGTTCAGATGCCCTCGCCGCCTCTGGCCTTGGTAGCTTTTGGGATATGTAA |
| Transcript | >OphauG2|110 ATGTTGATAAACGGAGAAAAGTTTGCCTGCGAGGCCTGCGTCAGAGGACACCGCGTGAGCAATTGCCAGCACAGT GACCGCCCACTTCAACACATCAATAAAAAGGGCCGTCCAGTCTCACAATGCCAACACTGCCGCACCATGCGCAAG TCGCGCTCAGCACACGTCAAGTGCGACTGCGGCGAAAAGACGAGCAAGTGTGCCCATCTGCAACAGCCCGTCCAA GGACACAAGGAAACCTGCTGCTGCAATCATGGCGGTCGCTGCACCTGCGCCCACAAAAAGGACACCTCTCTGGGA ACCGTGCCCGAGTCCGACTCGGATCACGACGCTCAAGCCGCCCCTCACCCAGGTCGCCCTAAAGCCTCGAGAAGG AGGCGCGCCAATACGGCCCACTCTGCAGACGCCATCATGTCTTTTGATCGCAACGGCCACCACAAGCCTACCGCC AAGCATAATCGGTCTGCTCAAAAATCGAGCCCCTATCAGCTCAATCGCGTCAATTCAACACAGAGTGTCAGCAGC CTTGGGGGCTCAGAGTCCATTTCGTACCACCTGGATGGTGATGCTCAATCATCCAACGGCCGCTCCCGCGCCTCC ACGTTGCATGAACAGCGCAAAGCCAAATCCGAAACTGCCTCACCCTTACTGTCCGGGTCTGCCCTGGCCCAGCTC AACGGCACACTGCCGCCACTGGACCTGACACGCATTGAGTACTCGTCCTATGTCCACAATGGCACCTTTGAAATG TTTGCCGCCTCTGGTCTTGCAGAAAACGACACACCCATGTACAGTGCTGGCTTGAGCGCAGCTTCCGTCGACTGG AGCCACTATGACCTTGGCGATACCAAGGGCGATTTTGCCCCGTCGAGCTACAGCCAAACTGGAGCTCCGAGTTTC AACGGTTTTGTTGAATTGGGAAGTGGCTCGGACCAGCCTCCCAATCTGACCAATACAAGGTCCACGTCGGGAAAT GTATCCGAGGTTGAAGACTTTGTTGCCAATGGAGACGATCTGAACGGCCTTCTCCGTCAAAATACCGCTTCCAGT ATTTCCGCCGATATCAGCACCATTGACTACGATAGCTTCTACAAGGGCTCTGACAACCCCAATGCCACGATTGCA GCAATCTCCATGGTGGACGAGGACCCTGCTTTCTGGATGTCCAACTATAACGACGCCATGGCTGTCGTGGACGAG AGTTCAGATGCCCTCGCCGCCTCTGGCCTTGGTAGCTTTTGGGATATGTAA |
| Gene | >OphauG2|110 ATGTTGATAAACGGAGAAAAGTTTGCCTGCGAGGCCTGCGTCAGAGGACACCGCGTGAGCAATTGCCAGCACAGT GGTCAGTCTTGCCCTTGGCCAGCATCATGTTTGCGCTCTTCTGGATGATGCTACTCTGCGTCGCGACCCCTCTAT TACCCCCCGCCCCCCTTCCTTTTTGCACCACCGCTCCAGCCGCCTCTTACAGAGCATACATGCAATTGCTGACGC CGTCCCTGGCGAGCCACGATAGACCGCCCACTTCAACACATCAATAAAAAGGGCCGTCCAGTCTCACAATGCCAA CACTGCCGCACCATGCGCAAGTCGCGCTCAGCACACGTCAAGTGCGACTGCGGCGAAAAGACGAGCAAGTGTGCC CATCTGCAACAGCCCGTCCAAGGACACAAGGGTCAGTAGTCGCACTAGTCCACTGTCCGTTTTTGCCTTTCTTTT TTTTTTCCTTTTTTTTCTCTTTTTTTTTTCTCTTCTTTTTTGCCCTTCTTTTTTTCCTTTTCTGCCACCCAAAAA AAAACCCCCCAAAAAAACCAAAAAAAAAAAAAAAAAAAAAAAAAAACTCTTGTCCTGACACCTCTCAAGAAACCT GCTGCTGCAATCATGGCGGTCGCTGCACCTGCGCCCACAAAAAGGACACCTCTCTGGGAACCGTGCCCGAGTCCG ACTCGGATCACGACGCTCAAGCCGCCCCTCACCCAGGTCGCCCTAAAGCCTCGAGAAGGAGGCGCGCCAATACGG CCCACTCTGCAGACGCCATCATGTCTTTTGATCGCAACGGCCACCACAAGCCTACCGCCAAGCATAATCGGTCTG CTCAAAAATCGAGCCCCTATCAGCTCAATCGCGTCAATTCAACACAGAGTGTCAGCAGCCTTGGGGGCTCAGAGT CCATTTCGTACCACCTGGATGGTGATGCTCAATCATCCAACGGCCGCTCCCGCGCCTCCACGTTGCATGAACAGC GCAAAGCCAAATCCGAAACTGCCTCACCCTTACTGTCCGGGTCTGCCCTGGCCCAGCTCAACGGCACACTGCCGC CACTGGACCTGACACGCATTGAGTACTCGTCCTATGTCCACAATGGCACCTTTGAAATGTTTGCCGCCTCTGGTC TTGCAGAAAACGACACACCCATGTACAGTGCTGGCTTGAGCGCAGCTTCCGTCGACTGGAGCCACTATGACCTTG GCGATACCAAGGGCGATTTTGCCCCGTCGAGCTACAGCCAAACTGGAGCTCCGAGTTTCAACGGTTTTGTTGAAT TGGGAAGTGGCTCGGACCAGCCTCCCAATCTGACCAATACAAGGTCCACGTCGGGAAATGTATCCGAGGTTGAAG ACTTTGTTGCCAATGGAGACGATCTGAACGGCCTTCTCCGTCAAAATACCGCTTCCAGTATTTCCGCCGATATCA GCACCATTGACTACGATAGCTTCTACAAGGGCTCTGACAACCCCAATGCCACGATTGCAGCAATCTCCATGGTGG ACGAGGACCCTGCTTTCTGGATGTCCAACTATAACGACGCCATGGCTGTCGTGGACGAGAGTTCAGATGCCCTCG CCGCCTCTGGCCTTGGTAGCTTTTGGGATATGTAA |