Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|1098
Gene name
LocationContig_1300:2003..3635
Strand+
Gene length (bp)1632
Transcript length (bp)1446
Coding sequence length (bp)1446
Protein length (aa) 482

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10355 Ytp1 Protein of unknown function (Ytp1) 3.7E-68 161 404
PF10348 DUF2427 Domain of unknown function (DUF2427) 6.0E-30 36 133

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P53584|YTP1_YEAST Protein YTP1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YTP1 PE=1 SV=1 162 453 4.0E-68
sp|O59714|YBH6_SCHPO Uncharacterized membrane protein C3B8.06 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC3B8.06 PE=1 SV=1 142 391 1.0E-10
sp|P25639|YCV1_YEAST Uncharacterized membrane protein YCR061W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCR061W PE=1 SV=2 218 373 1.0E-06

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 19 0.5

Transmembrane Domains

Domain # Start End Length
1 47 69 22
2 76 98 22
3 108 130 22
4 151 173 22
5 188 210 22
6 281 298 17
7 308 330 22
8 343 365 22
9 380 402 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|1098
MTLHLGFGALSLIPFILADTVRGHDHHMGNSKIVAGDAISQDPIDTTLWIHIFIQMLAYGVIFPIGMVFGITKSR
WHVPTQATGSVLALVGFFLGHAHGGREFVGGNIHAVFSNLLQLLLICQIVLGLYLKGHWERGVNGRIRKLIRPCH
SILGKAMPVLSWVQMLFGGITALGFCQADHLGQCLAHFIMGSAFIAYGIILTIILVVGQVWLRRCGRSQEFFDSA
VITAWGCVNTFTEHRWGTEWVRNDWQHTTMGIIWWCAGIAGMWLSSDRDGNPKRNFVPGFVIFMTGWAMSAHPQE
LMVSAETHSMFGKTLMAAGITRIIEIAFVLRDQQSLSHDGRTWNSFQYVPVFLLYAAGFLFMGATEEQMNLVDQS
ALDHVSYILIIFSLAFLMFSFANMLIYLYDRLANPAENVKSFSNGHVRISGRAVEEGQLRDAEEFELDGLMSDDE
GEEVRQMLRRSVDNLGPESPSTLGKNNETSV*
Coding >OphauG2|1098
ATGACTCTCCATTTAGGCTTTGGGGCTTTGTCCCTTATTCCCTTCATCCTCGCAGACACGGTTCGAGGACACGAT
CACCACATGGGCAACAGCAAGATTGTCGCCGGAGATGCCATCTCCCAGGATCCCATAGATACCACACTATGGATC
CACATTTTCATCCAGATGCTTGCCTACGGCGTCATCTTTCCCATCGGCATGGTCTTTGGCATCACAAAGTCTCGA
TGGCACGTTCCCACACAAGCCACCGGCTCCGTCCTTGCCCTCGTAGGCTTCTTCCTCGGCCATGCACACGGCGGT
CGAGAGTTTGTTGGGGGAAACATACATGCCGTCTTTTCAAATCTGCTCCAGCTGCTCCTTATTTGCCAAATAGTT
CTCGGCCTCTATCTCAAAGGCCACTGGGAAAGGGGCGTCAATGGCAGAATAAGAAAACTCATCCGGCCATGCCAC
TCCATCCTCGGTAAAGCAATGCCTGTCCTGTCGTGGGTTCAGATGCTATTTGGGGGCATTACCGCTCTCGGCTTC
TGCCAGGCCGATCACTTGGGGCAGTGCTTGGCGCATTTCATCATGGGCAGCGCCTTTATCGCCTACGGCATCATC
TTGACCATTATACTTGTTGTCGGTCAAGTCTGGCTTCGCAGATGCGGGCGCTCGCAGGAATTCTTTGACAGCGCC
GTCATTACCGCCTGGGGCTGTGTCAACACCTTTACCGAGCATCGCTGGGGCACCGAATGGGTCAGGAACGACTGG
CAACATACTACCATGGGAATTATTTGGTGGTGTGCGGGCATAGCGGGCATGTGGCTCAGCAGTGACCGCGATGGT
AACCCCAAGCGCAACTTTGTGCCTGGTTTTGTCATCTTCATGACTGGCTGGGCCATGTCGGCTCACCCCCAGGAA
CTCATGGTTAGCGCAGAAACACACAGCATGTTTGGCAAGACACTCATGGCTGCTGGTATTACACGCATTATTGAA
ATTGCTTTTGTGCTTCGGGACCAGCAATCTCTCTCGCACGACGGTCGCACTTGGAACAGTTTTCAATACGTTCCG
GTATTTCTCTTGTATGCTGCAGGCTTTCTTTTCATGGGAGCCACAGAGGAACAGATGAACTTGGTTGACCAGTCG
GCACTTGACCACGTGTCGTATATTCTCATCATCTTCTCGCTTGCATTCTTAATGTTTTCTTTTGCCAACATGCTT
ATTTACCTATATGATCGGCTTGCGAATCCAGCCGAAAACGTCAAGAGCTTTTCCAATGGACATGTGCGAATCAGT
GGTCGGGCAGTGGAGGAGGGACAGCTTCGTGATGCTGAGGAATTCGAGCTGGACGGCCTCATGAGCGATGATGAG
GGCGAAGAGGTGCGCCAAATGCTCAGACGAAGCGTCGACAACCTGGGCCCAGAATCGCCGAGCACTCTTGGCAAG
AACAATGAGACGTCGGTGTAA
Transcript >OphauG2|1098
ATGACTCTCCATTTAGGCTTTGGGGCTTTGTCCCTTATTCCCTTCATCCTCGCAGACACGGTTCGAGGACACGAT
CACCACATGGGCAACAGCAAGATTGTCGCCGGAGATGCCATCTCCCAGGATCCCATAGATACCACACTATGGATC
CACATTTTCATCCAGATGCTTGCCTACGGCGTCATCTTTCCCATCGGCATGGTCTTTGGCATCACAAAGTCTCGA
TGGCACGTTCCCACACAAGCCACCGGCTCCGTCCTTGCCCTCGTAGGCTTCTTCCTCGGCCATGCACACGGCGGT
CGAGAGTTTGTTGGGGGAAACATACATGCCGTCTTTTCAAATCTGCTCCAGCTGCTCCTTATTTGCCAAATAGTT
CTCGGCCTCTATCTCAAAGGCCACTGGGAAAGGGGCGTCAATGGCAGAATAAGAAAACTCATCCGGCCATGCCAC
TCCATCCTCGGTAAAGCAATGCCTGTCCTGTCGTGGGTTCAGATGCTATTTGGGGGCATTACCGCTCTCGGCTTC
TGCCAGGCCGATCACTTGGGGCAGTGCTTGGCGCATTTCATCATGGGCAGCGCCTTTATCGCCTACGGCATCATC
TTGACCATTATACTTGTTGTCGGTCAAGTCTGGCTTCGCAGATGCGGGCGCTCGCAGGAATTCTTTGACAGCGCC
GTCATTACCGCCTGGGGCTGTGTCAACACCTTTACCGAGCATCGCTGGGGCACCGAATGGGTCAGGAACGACTGG
CAACATACTACCATGGGAATTATTTGGTGGTGTGCGGGCATAGCGGGCATGTGGCTCAGCAGTGACCGCGATGGT
AACCCCAAGCGCAACTTTGTGCCTGGTTTTGTCATCTTCATGACTGGCTGGGCCATGTCGGCTCACCCCCAGGAA
CTCATGGTTAGCGCAGAAACACACAGCATGTTTGGCAAGACACTCATGGCTGCTGGTATTACACGCATTATTGAA
ATTGCTTTTGTGCTTCGGGACCAGCAATCTCTCTCGCACGACGGTCGCACTTGGAACAGTTTTCAATACGTTCCG
GTATTTCTCTTGTATGCTGCAGGCTTTCTTTTCATGGGAGCCACAGAGGAACAGATGAACTTGGTTGACCAGTCG
GCACTTGACCACGTGTCGTATATTCTCATCATCTTCTCGCTTGCATTCTTAATGTTTTCTTTTGCCAACATGCTT
ATTTACCTATATGATCGGCTTGCGAATCCAGCCGAAAACGTCAAGAGCTTTTCCAATGGACATGTGCGAATCAGT
GGTCGGGCAGTGGAGGAGGGACAGCTTCGTGATGCTGAGGAATTCGAGCTGGACGGCCTCATGAGCGATGATGAG
GGCGAAGAGGTGCGCCAAATGCTCAGACGAAGCGTCGACAACCTGGGCCCAGAATCGCCGAGCACTCTTGGCAAG
AACAATGAGACGTCGGTGTAA
Gene >OphauG2|1098
ATGACTCTCCATTTAGGCTTTGGGGCTTTGTCCCTTATTCCCTTCATCCTCGCAGACACGGTTCGAGGACACGAT
CACCACATGGGCAACAGCAAGATTGTCGCCGGAGATGCCATCTCCCAGGATCCCATAGTAGGCTGCTCGTCAATC
TCGGCAAGCCTCTCTCCCAAACTGATTGCATCTTTGCCAGGATACCACACTATGGATCCACATTTTCATCCAGAT
GCTTGCCTACGGCGTCATCTTTCCCATCGGCATGGTCTTTGGCGTACGGCGCATCTCTCCCGCCTCACCTCTTGA
CAAACGCTTACCAGCCTGCAATAGATCACAAAGTCTCGATGGCACGTTCCCACACAAGCCACCGGCTCCGTCCTT
GCCCTCGTAGGCTTCTTCCTCGGCCATGCACACGGCGGTCGAGAGTTTGTTGGGGGAAACATACATGCCGTCTTT
TCAAATCTGCTCCAGCTGCTCCTTATTTGCCAAATAGTTCTCGGCCTCTATCTCAAAGGCCACTGGGAAAGGGGC
GTCAATGGCAGAATAAGAAAACTCATCCGGCCATGCCACTCCATCCTCGGTAAAGCAATGCCTGTCCTGTCGTGG
GTTCAGATGCTATTTGGGGGCATTACCGCTCTCGGCTTCTGCCAGGCCGATCACTTGGGGCAGTGCTTGGCGCAT
TTCATCATGGGCAGCGCCTTTATCGCCTACGGCATCATCTTGACCATTATACTTGTTGTCGGTCAAGTCTGGCTT
CGCAGATGCGGGCGCTCGCAGGAATTCTTTGACAGCGCCGTCATTACCGCCTGGGGCTGTGTCAACACCTTTACC
GAGCATCGCTGGGGCACCGAATGGGTCAGGAACGACTGGCAACATACTACCATGGGAATTATTTGGTGGTGTGCG
GGCATAGCGGGCATGTGGCTCAGCAGTGACCGCGATGGTAACCCCAAGCGCAACTTTGTGCCTGGTTTTGTCATC
TTCATGACTGGCTGGGCCATGTCGGCTCACCCCCAGGAACTCATGGTTAGCGCAGAAACACACAGCATGTTTGGC
AAGACACTCATGGCTGCTGGTATTACACGCATTATTGAAATTGCTTTTGTGCTTCGGGACCAGCAATCTCTCTCG
CACGACGGTCGCACTTGGAACAGTTTTCAATACGTTCCGGTATTTGTACGTCTTTTTTTTTTTTTTTTGCTGAGC
CGACTGCAGAGTTTGCCTGTTGAGATGCTGACAAAAAGACAGCTCTTGTATGCTGCAGGCTTTCTTTTCATGGGA
GCCACAGAGGAACAGATGAACTTGGTTGACCAGTCGGCACTTGACCACGTGTCGTATATTCTCATCATCTTCTCG
CTTGCATTCTTAATGTTTTCTTTTGCCAACATGCTTATTTACCTATATGATCGGCTTGCGAATCCAGCCGAAAAC
GTCAAGAGCTTTTCCAATGGACATGTGCGAATCAGTGGTCGGGCAGTGGAGGAGGGACAGCTTCGTGATGCTGAG
GAATTCGAGCTGGACGGCCTCATGAGCGATGATGAGGGCGAAGAGGTGCGCCAAATGCTCAGACGAAGCGTCGAC
AACCTGGGCCCAGAATCGCCGAGCACTCTTGGCAAGAACAATGAGACGTCGGTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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