© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|1090 |
| Gene name | |
| Location | Contig_13:43865..44460 |
| Strand | - |
| Gene length (bp) | 595 |
| Transcript length (bp) | 462 |
| Coding sequence length (bp) | 462 |
| Protein length (aa) | 154 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF04281 | Tom22 | Mitochondrial import receptor subunit Tom22 | 3.6E-49 | 1 | 129 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q07335|TOM22_NEUCR | Mitochondrial import receptor subunit tom22 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=tom22 PE=2 SV=1 | 1 | 153 | 2.0E-43 |
| sp|O13813|TOM22_SCHPO | Mitochondrial import receptor subunit tom22 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tom22 PE=3 SV=1 | 1 | 128 | 3.0E-12 |
| sp|P49334|TOM22_YEAST | Mitochondrial import receptor subunit TOM22 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TOM22 PE=1 SV=3 | 1 | 138 | 2.0E-09 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0006886 | intracellular protein transport | Yes |
| GO:0005741 | mitochondrial outer membrane | Yes |
| GO:0051649 | establishment of localization in cell | No |
| GO:0070727 | cellular macromolecule localization | No |
| GO:0051179 | localization | No |
| GO:0015031 | protein transport | No |
| GO:0051234 | establishment of localization | No |
| GO:0071702 | organic substance transport | No |
| GO:0019867 | outer membrane | No |
| GO:0008150 | biological_process | No |
| GO:0031968 | organelle outer membrane | No |
| GO:0071705 | nitrogen compound transport | No |
| GO:0051641 | cellular localization | No |
| GO:0045184 | establishment of protein localization | No |
| GO:0008104 | protein localization | No |
| GO:0009987 | cellular process | No |
| GO:0005575 | cellular_component | No |
| GO:0031090 | organelle membrane | No |
| GO:0046907 | intracellular transport | No |
| GO:0098588 | bounding membrane of organelle | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0033036 | macromolecule localization | No |
| GO:0031966 | mitochondrial membrane | No |
| GO:0016020 | membrane | No |
| GO:0006810 | transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 43 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 87 | 106 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|1090 MVTLTEVEDEHFQTGQPGPDEDEDDFTDTDSEISNDSDFDPRNETFSERLYALRDIIPPATRGWVSSRVEAFSSR AWSVLSFSGRSAWVITTSALFFGVPFALAFSEDQQIMAMEQEYNMRQSGSELLTADTEKDVASKDSTAAADEKAK PEL* |
| Coding | >OphauG2|1090 ATGGTTACTCTCACCGAGGTTGAGGATGAGCATTTCCAGACCGGTCAGCCTGGTCCGGACGAGGACGAGGACGAT TTTACAGACACGGACTCTGAAATCTCAAACGATTCAGATTTTGACCCCAGGAACGAGACTTTCTCAGAACGATTA TACGCCCTTCGTGATATAATACCACCCGCAACCCGAGGCTGGGTTTCAAGCCGTGTCGAAGCCTTCTCGAGCCGT GCATGGAGTGTTCTTTCTTTCAGCGGTCGGAGTGCCTGGGTCATCACTACATCAGCTCTCTTTTTTGGTGTACCT TTTGCCCTTGCCTTCTCTGAAGATCAGCAGATCATGGCCATGGAACAGGAGTACAATATGCGACAGAGCGGGAGC GAACTCCTTACCGCCGACACCGAAAAAGACGTAGCGAGCAAGGATAGCACAGCAGCGGCTGATGAGAAAGCGAAG CCTGAGCTCTAA |
| Transcript | >OphauG2|1090 ATGGTTACTCTCACCGAGGTTGAGGATGAGCATTTCCAGACCGGTCAGCCTGGTCCGGACGAGGACGAGGACGAT TTTACAGACACGGACTCTGAAATCTCAAACGATTCAGATTTTGACCCCAGGAACGAGACTTTCTCAGAACGATTA TACGCCCTTCGTGATATAATACCACCCGCAACCCGAGGCTGGGTTTCAAGCCGTGTCGAAGCCTTCTCGAGCCGT GCATGGAGTGTTCTTTCTTTCAGCGGTCGGAGTGCCTGGGTCATCACTACATCAGCTCTCTTTTTTGGTGTACCT TTTGCCCTTGCCTTCTCTGAAGATCAGCAGATCATGGCCATGGAACAGGAGTACAATATGCGACAGAGCGGGAGC GAACTCCTTACCGCCGACACCGAAAAAGACGTAGCGAGCAAGGATAGCACAGCAGCGGCTGATGAGAAAGCGAAG CCTGAGCTCTAA |
| Gene | >OphauG2|1090 ATGGTTACTCTCACCGAGGTTGAGGATGAGCATTTCCAGACCGGTCAGCCTGGTCCGGACGAGGACGAGGACGAT TTTACAGACACGGGTTTGTCTTCCACGAAATCCTTGCACCGATCAAGAATATGATGGACATGGCCTCTTGCCATC ATCACCATTATGCAAAAAGCATCGTTTCTAAATAAGCCAAGCCATTTGCTAACACGTATGTAATAAAAAAGACTC TGAAATCTCAAACGATTCAGATTTTGACCCCAGGAACGAGACTTTCTCAGAACGATTATACGCCCTTCGTGATAT AATACCACCCGCAACCCGAGGCTGGGTTTCAAGCCGTGTCGAAGCCTTCTCGAGCCGTGCATGGAGTGTTCTTTC TTTCAGCGGTCGGAGTGCCTGGGTCATCACTACATCAGCTCTCTTTTTTGGTGTACCTTTTGCCCTTGCCTTCTC TGAAGATCAGCAGATCATGGCCATGGAACAGGAGTACAATATGCGACAGAGCGGGAGCGAACTCCTTACCGCCGA CACCGAAAAAGACGTAGCGAGCAAGGATAGCACAGCAGCGGCTGATGAGAAAGCGAAGCCTGAGCTCTAA |