© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|1081 |
| Gene name | |
| Location | Contig_13:14054..15029 |
| Strand | + |
| Gene length (bp) | 975 |
| Transcript length (bp) | 918 |
| Coding sequence length (bp) | 918 |
| Protein length (aa) | 306 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02114 | Phosducin | Phosducin | 4.2E-13 | 82 | 293 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q13371|PHLP_HUMAN | Phosducin-like protein OS=Homo sapiens GN=PDCL PE=1 SV=3 | 83 | 286 | 2.0E-12 |
| sp|Q2HJA9|PHLP_BOVIN | Phosducin-like protein OS=Bos taurus GN=PDCL PE=2 SV=1 | 83 | 278 | 2.0E-11 |
| sp|Q63737|PHLP_RAT | Phosducin-like protein OS=Rattus norvegicus GN=Pdcl PE=1 SV=1 | 83 | 278 | 2.0E-10 |
| sp|Q9DBX2|PHLP_MOUSE | Phosducin-like protein OS=Mus musculus GN=Pdcl PE=1 SV=1 | 38 | 278 | 3.0E-10 |
| sp|P19632|PHOS_BOVIN | Phosducin OS=Bos taurus GN=PDC PE=1 SV=2 | 191 | 305 | 1.0E-07 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q13371|PHLP_HUMAN | Phosducin-like protein OS=Homo sapiens GN=PDCL PE=1 SV=3 | 83 | 286 | 2.0E-12 |
| sp|Q2HJA9|PHLP_BOVIN | Phosducin-like protein OS=Bos taurus GN=PDCL PE=2 SV=1 | 83 | 278 | 2.0E-11 |
| sp|Q63737|PHLP_RAT | Phosducin-like protein OS=Rattus norvegicus GN=Pdcl PE=1 SV=1 | 83 | 278 | 2.0E-10 |
| sp|Q9DBX2|PHLP_MOUSE | Phosducin-like protein OS=Mus musculus GN=Pdcl PE=1 SV=1 | 38 | 278 | 3.0E-10 |
| sp|P19632|PHOS_BOVIN | Phosducin OS=Bos taurus GN=PDC PE=1 SV=2 | 191 | 305 | 1.0E-07 |
| sp|Q9XS39|PHOS_HORSE | Phosducin OS=Equus caballus GN=PDC PE=2 SV=1 | 83 | 287 | 2.0E-06 |
| sp|O77560|PHOS_CANLF | Phosducin OS=Canis lupus familiaris GN=PDC PE=1 SV=2 | 191 | 287 | 8.0E-06 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 40 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|1081 MATTAQQEFNHLVAANTCCHRDSQRRLDDKDKDGDNLTSDNDSDDQEAAYHRAQIDAAMRSTPGDSTPELKLPPS SFDNGRATGVKGVIADARAFQTARRSRWRDRARSARRSIFGLGGTLNNGSRSESETDDEACGSVSPHGDPALASS NQDSDEEAFMHQWREARRRELESEESRPVRSRRTSPSVRTYGFLDEVDALGYLDAIEKVTRETKVVVFVYDDACD VSATLESALIPLVKQHPTIHFVKVHFDEIEFDPAAVPSILAYQNQGDLMANLTGLIELMPDEAHYTQDSLSRLLR KHNVL* |
| Coding | >OphauG2|1081 ATGGCGACGACGGCCCAGCAGGAATTCAACCACCTTGTTGCCGCAAACACTTGCTGCCATCGCGACTCTCAAAGA CGGCTCGACGACAAGGACAAGGACGGCGACAACTTGACCTCCGACAACGACTCTGACGATCAAGAAGCCGCCTAC CACAGGGCGCAGATTGACGCCGCCATGCGCAGTACGCCCGGCGACTCGACCCCGGAACTCAAGCTTCCACCATCT TCCTTTGACAACGGCCGGGCTACCGGCGTCAAGGGCGTCATTGCCGATGCCCGAGCCTTTCAGACGGCTCGCCGC AGCCGATGGAGGGACCGGGCACGCTCGGCGCGGCGCAGCATCTTTGGGCTTGGAGGAACGCTCAACAACGGCTCC CGCAGCGAAAGCGAGACGGACGATGAGGCCTGTGGCAGCGTCTCGCCCCACGGTGACCCAGCGCTGGCCTCTTCA AATCAAGACTCGGACGAGGAGGCTTTTATGCACCAATGGCGCGAGGCGAGGCGGCGCGAACTCGAGAGCGAGGAA AGCCGCCCTGTGCGCAGCCGCAGAACGAGCCCAAGTGTGCGTACATATGGCTTCCTCGACGAAGTGGACGCTCTC GGGTACCTGGATGCCATTGAAAAGGTGACGAGAGAGACCAAGGTTGTCGTCTTTGTCTACGATGATGCCTGTGAC GTCTCGGCAACGCTCGAATCCGCCTTGATTCCCCTGGTGAAGCAGCACCCCACGATTCACTTTGTCAAGGTGCAC TTTGACGAGATTGAATTCGACCCGGCTGCCGTGCCATCCATCCTTGCCTACCAAAACCAGGGTGACTTGATGGCA AACCTGACGGGGCTCATTGAGCTGATGCCTGACGAGGCACATTACACGCAAGACTCGCTTAGCCGGCTACTGCGC AAGCACAATGTTCTCTAG |
| Transcript | >OphauG2|1081 ATGGCGACGACGGCCCAGCAGGAATTCAACCACCTTGTTGCCGCAAACACTTGCTGCCATCGCGACTCTCAAAGA CGGCTCGACGACAAGGACAAGGACGGCGACAACTTGACCTCCGACAACGACTCTGACGATCAAGAAGCCGCCTAC CACAGGGCGCAGATTGACGCCGCCATGCGCAGTACGCCCGGCGACTCGACCCCGGAACTCAAGCTTCCACCATCT TCCTTTGACAACGGCCGGGCTACCGGCGTCAAGGGCGTCATTGCCGATGCCCGAGCCTTTCAGACGGCTCGCCGC AGCCGATGGAGGGACCGGGCACGCTCGGCGCGGCGCAGCATCTTTGGGCTTGGAGGAACGCTCAACAACGGCTCC CGCAGCGAAAGCGAGACGGACGATGAGGCCTGTGGCAGCGTCTCGCCCCACGGTGACCCAGCGCTGGCCTCTTCA AATCAAGACTCGGACGAGGAGGCTTTTATGCACCAATGGCGCGAGGCGAGGCGGCGCGAACTCGAGAGCGAGGAA AGCCGCCCTGTGCGCAGCCGCAGAACGAGCCCAAGTGTGCGTACATATGGCTTCCTCGACGAAGTGGACGCTCTC GGGTACCTGGATGCCATTGAAAAGGTGACGAGAGAGACCAAGGTTGTCGTCTTTGTCTACGATGATGCCTGTGAC GTCTCGGCAACGCTCGAATCCGCCTTGATTCCCCTGGTGAAGCAGCACCCCACGATTCACTTTGTCAAGGTGCAC TTTGACGAGATTGAATTCGACCCGGCTGCCGTGCCATCCATCCTTGCCTACCAAAACCAGGGTGACTTGATGGCA AACCTGACGGGGCTCATTGAGCTGATGCCTGACGAGGCACATTACACGCAAGACTCGCTTAGCCGGCTACTGCGC AAGCACAATGTTCTCTAG |
| Gene | >OphauG2|1081 ATGGCGACGACGGCCCAGCAGGAATTCAACCACCTTGTTGCCGCAAACACTTGCTGCCATCGCGACTCTCAAAGA CGGCTCGACGACAAGGACAAGGACGGCGACAACTTGACCTCCGACAACGACTCTGACGATCAAGAAGCCGCCTAC CACAGGGCGCAGATTGACGCCGCCATGCGCAGTACGCCCGGCGACTCGACCCCGGAACTCAAGCTTCCACCATCT TCCTTTGACAACGGCCGGGCTACCGGCGTCAAGGGCGTCATTGCCGATGCCCGAGCCTTTCAGACGGCTCGCCGC AGCCGATGGAGGGACCGGGCACGCTCGGCGCGGCGCAGCATCTTTGGGCTTGGAGGAACGCTCAACAACGGCTCC CGCAGCGAAAGCGAGACGGACGATGAGGCCTGTGGCAGCGTCTCGCCCCACGGTGACCCAGCGCTGGCCTCTTCA AATCAAGACTCGGACGAGGAGGCTTTTATGCACCAATGGCGCGAGGCGAGGCGGCGCGAACTCGAGAGCGAGGAA AGCCGCCCTGTGCGCAGCCGCAGAACGAGCCCAAGTGTGCGTACATATGGCTTCCTCGACGAAGTGGACGCTCTC GGGTACCTGGATGCCATTGAAAAGGTGACGAGAGAGACCAAGGTTGTCGTCTTTGTCTACGATGATGCCGTAAGT GGCCAAGCAAGCCGTCATGCTGCGAGTACACCAATGCTGACCAAGGAACAGTGTGACGTCTCGGCAACGCTCGAA TCCGCCTTGATTCCCCTGGTGAAGCAGCACCCCACGATTCACTTTGTCAAGGTGCACTTTGACGAGATTGAATTC GACCCGGCTGCCGTGCCATCCATCCTTGCCTACCAAAACCAGGGTGACTTGATGGCAAACCTGACGGGGCTCATT GAGCTGATGCCTGACGAGGCACATTACACGCAAGACTCGCTTAGCCGGCTACTGCGCAAGCACAATGTTCTCTAG |