Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|1062
Gene name
LocationContig_1291:292..1234
Strand+
Gene length (bp)942
Transcript length (bp)807
Coding sequence length (bp)807
Protein length (aa) 269

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04117 Mpv17_PMP22 Mpv17 / PMP22 family 2.6E-10 170 226

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q2KIY1|PXMP2_BOVIN Peroxisomal membrane protein 2 OS=Bos taurus GN=PXMP2 PE=2 SV=3 58 231 9.0E-11
sp|Q54GD8|PX24C_DICDI PXMP2/4 family protein 3 OS=Dictyostelium discoideum GN=DDB_G0290223 PE=3 SV=1 61 234 3.0E-10
sp|Q9ZS51|PMP22_ARATH Peroxisomal membrane protein PMP22 OS=Arabidopsis thaliana GN=PMP22 PE=1 SV=1 55 241 7.0E-10
sp|Q54FR4|PX24D_DICDI PXMP2/4 family protein 4 OS=Dictyostelium discoideum GN=DDB_G0290631 PE=3 SV=1 61 230 1.0E-09
sp|Q4IPX8|SYM1_GIBZE Protein SYM1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=SYM1 PE=3 SV=1 57 232 2.0E-08
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Swissprot ID Swissprot Description Start End E-value
sp|Q2KIY1|PXMP2_BOVIN Peroxisomal membrane protein 2 OS=Bos taurus GN=PXMP2 PE=2 SV=3 58 231 9.0E-11
sp|Q54GD8|PX24C_DICDI PXMP2/4 family protein 3 OS=Dictyostelium discoideum GN=DDB_G0290223 PE=3 SV=1 61 234 3.0E-10
sp|Q9ZS51|PMP22_ARATH Peroxisomal membrane protein PMP22 OS=Arabidopsis thaliana GN=PMP22 PE=1 SV=1 55 241 7.0E-10
sp|Q54FR4|PX24D_DICDI PXMP2/4 family protein 4 OS=Dictyostelium discoideum GN=DDB_G0290631 PE=3 SV=1 61 230 1.0E-09
sp|Q4IPX8|SYM1_GIBZE Protein SYM1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=SYM1 PE=3 SV=1 57 232 2.0E-08
sp|Q07066|PXMP2_RAT Peroxisomal membrane protein 2 OS=Rattus norvegicus GN=Pxmp2 PE=1 SV=2 58 231 3.0E-06
sp|Q54XX9|PX24B_DICDI PXMP2/4 family protein 2 OS=Dictyostelium discoideum GN=DDB_G0278529 PE=3 SV=1 61 233 5.0E-06
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GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0110165 cellular anatomical entity No
GO:0005575 cellular_component No
GO:0031224 intrinsic component of membrane No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 110 132 22
2 145 167 22
3 210 229 19

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup5168
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|1062 (this protein)
Ophiocordyceps australis map64 (Brazil) OphauB2|5083
Ophiocordyceps camponoti-floridani Ophcf2|01757
Ophiocordyceps camponoti-rufipedis Ophun1|995
Ophiocordyceps kimflemingae Ophio5|4958
Ophiocordyceps subramaniannii Hirsu2|3818

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|1062
MSVKFERDTLKQTAHHAVSDMVAGSKPIPGTSGKHVIAERIGTALTGGLQNAGSKGYLAAYIKQLESNPLRTKML
TAGSLAGTQELMASWLAKDRNKHGHYMTSRVPKMAAYGALVSAPLGHLLIWILQKAFRGRTSLRAKVMQILVSNL
IIAPIQNSIYLVAMALIAGARTHHQVRATVKVGFWRVMRVSWVTSPICLAFAQKFLPDQLWVPFFNIVSFVIGTY
INTVTKKKRLAALRRKHFGEGRSSGMGRPEDYSAGHMGSNPAY*
Coding >OphauG2|1062
ATGTCGGTCAAGTTTGAACGCGACACGTTGAAGCAAACGGCGCACCATGCAGTCTCGGACATGGTGGCCGGCAGC
AAGCCCATTCCTGGCACCAGCGGCAAGCATGTTATTGCTGAAAGGATCGGCACTGCCCTCACGGGTGGCCTTCAG
AACGCCGGCTCCAAGGGCTATCTAGCTGCCTACATCAAGCAGCTTGAGTCGAACCCCCTGCGCACAAAGATGCTC
ACTGCTGGCTCTCTGGCTGGCACCCAGGAGCTCATGGCATCGTGGCTGGCCAAGGACCGCAACAAGCATGGCCAC
TACATGACATCGCGCGTCCCAAAAATGGCGGCTTACGGCGCCCTCGTCAGCGCGCCTCTGGGCCACCTTCTCATT
TGGATCTTGCAAAAGGCCTTTCGCGGTCGTACAAGCCTTCGTGCCAAGGTGATGCAGATTTTGGTCAGCAACCTC
ATTATTGCGCCCATCCAAAACAGCATCTACTTGGTTGCCATGGCCCTCATTGCCGGTGCTCGCACCCATCACCAG
GTGCGCGCCACGGTCAAAGTCGGGTTCTGGAGAGTCATGCGCGTCTCTTGGGTCACTTCGCCCATTTGCCTGGCC
TTTGCCCAAAAGTTCCTGCCCGATCAGCTCTGGGTTCCCTTTTTCAACATCGTATCCTTCGTCATTGGCACTTAT
ATCAATACAGTTACCAAGAAAAAGCGTCTGGCTGCATTGCGAAGGAAGCATTTTGGAGAAGGCCGCTCAAGTGGC
ATGGGCCGACCCGAAGACTATTCTGCGGGCCACATGGGGTCTAATCCTGCGTACTGA
Transcript >OphauG2|1062
ATGTCGGTCAAGTTTGAACGCGACACGTTGAAGCAAACGGCGCACCATGCAGTCTCGGACATGGTGGCCGGCAGC
AAGCCCATTCCTGGCACCAGCGGCAAGCATGTTATTGCTGAAAGGATCGGCACTGCCCTCACGGGTGGCCTTCAG
AACGCCGGCTCCAAGGGCTATCTAGCTGCCTACATCAAGCAGCTTGAGTCGAACCCCCTGCGCACAAAGATGCTC
ACTGCTGGCTCTCTGGCTGGCACCCAGGAGCTCATGGCATCGTGGCTGGCCAAGGACCGCAACAAGCATGGCCAC
TACATGACATCGCGCGTCCCAAAAATGGCGGCTTACGGCGCCCTCGTCAGCGCGCCTCTGGGCCACCTTCTCATT
TGGATCTTGCAAAAGGCCTTTCGCGGTCGTACAAGCCTTCGTGCCAAGGTGATGCAGATTTTGGTCAGCAACCTC
ATTATTGCGCCCATCCAAAACAGCATCTACTTGGTTGCCATGGCCCTCATTGCCGGTGCTCGCACCCATCACCAG
GTGCGCGCCACGGTCAAAGTCGGGTTCTGGAGAGTCATGCGCGTCTCTTGGGTCACTTCGCCCATTTGCCTGGCC
TTTGCCCAAAAGTTCCTGCCCGATCAGCTCTGGGTTCCCTTTTTCAACATCGTATCCTTCGTCATTGGCACTTAT
ATCAATACAGTTACCAAGAAAAAGCGTCTGGCTGCATTGCGAAGGAAGCATTTTGGAGAAGGCCGCTCAAGTGGC
ATGGGCCGACCCGAAGACTATTCTGCGGGCCACATGGGGTCTAATCCTGCGTACTGA
Gene >OphauG2|1062
ATGTCGGTCAAGTTTGAACGCGACACGTTGAAGCAAACGGCGCACCATGCAGTCTCGGACATGGTGGCCGGCAGC
AAGCCCATTCCTGGCACCAGCGGCAAGCATGTTATTGCTGAAAGGATCGGCACTGCCCTCACGGGTGGCCTTCAG
AACGCCGGCTCCAAGGGCTATCTAGCTGTGCGTTTGGCGTTCCCCTAGGTGTATTTCTGGCGTCTGACTCTTTTC
GCTCCTTGACTATGTTCAGGCCTACATCAAGCAGCTTGAGTCGAACCCCCTGCGCACAAAGATGCTCACTGCTGG
CTCTCTGGCTGGCACCCAGGAGCTCATGGCATCGTGGCTGGCCAAGGACCGCAACAAGCATGGCCACTACATGAC
ATCGCGCGTCCCAAAAATGGCGGCTTACGGCGCCCTCGTCAGCGCGCCTCTGGGCCACCTTCTCATTTGGATCTT
GCAAAAGGCCTTTCGCGGTCGTACAAGCCTTCGTGCCAAGGTGATGCAGATTTTGGTCAGCAACCTCATTGTAAG
TTACTACCCACAGCCCAAATATCCCCTTCCTCCCAATAGCCTTATTGACTCGCCGTGATACAGATTGCGCCCATC
CAAAACAGCATCTACTTGGTTGCCATGGCCCTCATTGCCGGTGCTCGCACCCATCACCAGGTGCGCGCCACGGTC
AAAGTCGGGTTCTGGAGAGTCATGCGCGTCTCTTGGGTCACTTCGCCCATTTGCCTGGCCTTTGCCCAAAAGTTC
CTGCCCGATCAGCTCTGGGTTCCCTTTTTCAACATCGTATCCTTCGTCATTGGCACTTATATCAATACAGTTACC
AAGAAAAAGCGTCTGGCTGCATTGCGAAGGAAGCATTTTGGAGAAGGCCGCTCAAGTGGCATGGGCCGACCCGAA
GACTATTCTGCGGGCCACATGGGGTCTAATCCTGCGTACTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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