Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|1005
Gene name
LocationContig_1270:3642..4731
Strand+
Gene length (bp)1089
Transcript length (bp)1089
Coding sequence length (bp)1089
Protein length (aa) 363

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13343 SBP_bac_6 Bacterial extracellular solute-binding protein 6.0E-09 114 299
PF13531 SBP_bac_11 Bacterial extracellular solute-binding protein 1.7E-08 161 298

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|1005
MSVSLLAAALLLAPAVSADRLLGFNSAPLLETRSLDQIYQAALAEGGRVVCWHGGDERNQQDALKRAFEARFPNM
TLDISVDLSKYHDVRIDEQLAVGNVTVDSVILQTVHDYPRWAQQGALLNYAPQGFDQIHDDFKDSVSASYYGLEV
FYWQSIWNTQKTDGATFSTFADYLRPEFKDKLVLTYPNDDDAVLFAFDMIMQRNGTQFFDDLLAQNPHWVRGTAT
PLTLVSQDNNSYAATFTSAAGFKPEQQSINVAFPTDAMSVTWAQLGAIMAQAPHPEGAKLLHNYMLSPEFQESLG
GWSVRRDVPNPEGVPDLWSSPNLNPTLFSRWMENRANVERLRFWFEARLGTAPGVDPIDDEI*
Coding >OphauG2|1005
ATGTCCGTGTCGCTCCTTGCTGCAGCTCTGCTGCTAGCTCCCGCCGTGTCCGCCGACCGGCTGCTGGGCTTCAAC
AGCGCTCCGCTCCTGGAAACTCGCTCCCTTGACCAAATCTACCAAGCCGCACTAGCCGAAGGCGGCAGAGTCGTC
TGTTGGCACGGCGGCGACGAAAGGAATCAACAAGACGCGCTCAAGCGCGCCTTTGAAGCCCGGTTCCCAAACATG
ACGCTCGACATCTCCGTCGACCTGTCCAAGTACCACGACGTGCGCATTGACGAGCAGCTCGCAGTCGGCAACGTC
ACTGTCGACAGCGTCATTCTGCAAACCGTCCACGACTACCCCCGCTGGGCTCAGCAGGGCGCCCTGCTCAACTAT
GCGCCCCAGGGCTTCGACCAGATCCACGACGACTTCAAGGACTCGGTTTCCGCTTCCTACTATGGCCTCGAGGTC
TTTTACTGGCAGAGCATCTGGAACACCCAAAAGACGGACGGCGCCACCTTTTCCACATTTGCCGATTACCTGCGC
CCCGAGTTCAAGGACAAGCTCGTCCTCACCTATCCCAACGACGACGACGCCGTCCTCTTTGCCTTTGACATGATT
ATGCAGCGCAACGGCACCCAGTTCTTCGACGACTTGCTGGCCCAGAACCCTCACTGGGTTCGCGGCACCGCCACC
CCTCTAACCCTCGTCAGCCAGGACAACAACTCCTACGCCGCCACCTTTACCAGCGCCGCCGGCTTCAAGCCCGAG
CAGCAATCCATAAACGTCGCCTTTCCCACCGACGCCATGTCCGTCACCTGGGCCCAGCTCGGCGCCATCATGGCC
CAGGCCCCTCACCCCGAAGGCGCCAAGCTGCTGCACAACTACATGCTGTCCCCCGAATTCCAAGAATCCCTCGGC
GGCTGGAGCGTGCGCCGCGACGTCCCAAACCCCGAGGGCGTCCCAGACTTGTGGTCCAGCCCAAACCTCAACCCG
ACGCTCTTTAGCCGCTGGATGGAGAACCGCGCCAATGTCGAGCGACTGCGCTTCTGGTTTGAGGCGCGCCTCGGC
ACTGCTCCGGGCGTGGATCCTATCGACGATGAGATTTAA
Transcript >OphauG2|1005
ATGTCCGTGTCGCTCCTTGCTGCAGCTCTGCTGCTAGCTCCCGCCGTGTCCGCCGACCGGCTGCTGGGCTTCAAC
AGCGCTCCGCTCCTGGAAACTCGCTCCCTTGACCAAATCTACCAAGCCGCACTAGCCGAAGGCGGCAGAGTCGTC
TGTTGGCACGGCGGCGACGAAAGGAATCAACAAGACGCGCTCAAGCGCGCCTTTGAAGCCCGGTTCCCAAACATG
ACGCTCGACATCTCCGTCGACCTGTCCAAGTACCACGACGTGCGCATTGACGAGCAGCTCGCAGTCGGCAACGTC
ACTGTCGACAGCGTCATTCTGCAAACCGTCCACGACTACCCCCGCTGGGCTCAGCAGGGCGCCCTGCTCAACTAT
GCGCCCCAGGGCTTCGACCAGATCCACGACGACTTCAAGGACTCGGTTTCCGCTTCCTACTATGGCCTCGAGGTC
TTTTACTGGCAGAGCATCTGGAACACCCAAAAGACGGACGGCGCCACCTTTTCCACATTTGCCGATTACCTGCGC
CCCGAGTTCAAGGACAAGCTCGTCCTCACCTATCCCAACGACGACGACGCCGTCCTCTTTGCCTTTGACATGATT
ATGCAGCGCAACGGCACCCAGTTCTTCGACGACTTGCTGGCCCAGAACCCTCACTGGGTTCGCGGCACCGCCACC
CCTCTAACCCTCGTCAGCCAGGACAACAACTCCTACGCCGCCACCTTTACCAGCGCCGCCGGCTTCAAGCCCGAG
CAGCAATCCATAAACGTCGCCTTTCCCACCGACGCCATGTCCGTCACCTGGGCCCAGCTCGGCGCCATCATGGCC
CAGGCCCCTCACCCCGAAGGCGCCAAGCTGCTGCACAACTACATGCTGTCCCCCGAATTCCAAGAATCCCTCGGC
GGCTGGAGCGTGCGCCGCGACGTCCCAAACCCCGAGGGCGTCCCAGACTTGTGGTCCAGCCCAAACCTCAACCCG
ACGCTCTTTAGCCGCTGGATGGAGAACCGCGCCAATGTCGAGCGACTGCGCTTCTGGTTTGAGGCGCGCCTCGGC
ACTGCTCCGGGCGTGGATCCTATCGACGATGAGATTTAA
Gene >OphauG2|1005
ATGTCCGTGTCGCTCCTTGCTGCAGCTCTGCTGCTAGCTCCCGCCGTGTCCGCCGACCGGCTGCTGGGCTTCAAC
AGCGCTCCGCTCCTGGAAACTCGCTCCCTTGACCAAATCTACCAAGCCGCACTAGCCGAAGGCGGCAGAGTCGTC
TGTTGGCACGGCGGCGACGAAAGGAATCAACAAGACGCGCTCAAGCGCGCCTTTGAAGCCCGGTTCCCAAACATG
ACGCTCGACATCTCCGTCGACCTGTCCAAGTACCACGACGTGCGCATTGACGAGCAGCTCGCAGTCGGCAACGTC
ACTGTCGACAGCGTCATTCTGCAAACCGTCCACGACTACCCCCGCTGGGCTCAGCAGGGCGCCCTGCTCAACTAT
GCGCCCCAGGGCTTCGACCAGATCCACGACGACTTCAAGGACTCGGTTTCCGCTTCCTACTATGGCCTCGAGGTC
TTTTACTGGCAGAGCATCTGGAACACCCAAAAGACGGACGGCGCCACCTTTTCCACATTTGCCGATTACCTGCGC
CCCGAGTTCAAGGACAAGCTCGTCCTCACCTATCCCAACGACGACGACGCCGTCCTCTTTGCCTTTGACATGATT
ATGCAGCGCAACGGCACCCAGTTCTTCGACGACTTGCTGGCCCAGAACCCTCACTGGGTTCGCGGCACCGCCACC
CCTCTAACCCTCGTCAGCCAGGACAACAACTCCTACGCCGCCACCTTTACCAGCGCCGCCGGCTTCAAGCCCGAG
CAGCAATCCATAAACGTCGCCTTTCCCACCGACGCCATGTCCGTCACCTGGGCCCAGCTCGGCGCCATCATGGCC
CAGGCCCCTCACCCCGAAGGCGCCAAGCTGCTGCACAACTACATGCTGTCCCCCGAATTCCAAGAATCCCTCGGC
GGCTGGAGCGTGCGCCGCGACGTCCCAAACCCCGAGGGCGTCCCAGACTTGTGGTCCAGCCCAAACCTCAACCCG
ACGCTCTTTAGCCGCTGGATGGAGAACCGCGCCAATGTCGAGCGACTGCGCTTCTGGTTTGAGGCGCGCCTCGGC
ACTGCTCCGGGCGTGGATCCTATCGACGATGAGATTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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