Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauG2\|1005
Gene name
Location	Contig_1270:3642..4731
Strand	+
Gene length (bp)	1089
Transcript length (bp)	1089
Coding sequence length (bp)	1089
Protein length (aa)	363

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF13343	SBP_bac_6	Bacterial extracellular solute-binding protein	6.0E-09	114	299
PF13531	SBP_bac_11	Bacterial extracellular solute-binding protein	1.7E-08	161	298

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 19	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauG2\|1005 MSVSLLAAALLLAPAVSADRLLGFNSAPLLETRSLDQIYQAALAEGGRVVCWHGGDERNQQDALKRAFEARFPNM TLDISVDLSKYHDVRIDEQLAVGNVTVDSVILQTVHDYPRWAQQGALLNYAPQGFDQIHDDFKDSVSASYYGLEV FYWQSIWNTQKTDGATFSTFADYLRPEFKDKLVLTYPNDDDAVLFAFDMIMQRNGTQFFDDLLAQNPHWVRGTAT PLTLVSQDNNSYAATFTSAAGFKPEQQSINVAFPTDAMSVTWAQLGAIMAQAPHPEGAKLLHNYMLSPEFQESLG GWSVRRDVPNPEGVPDLWSSPNLNPTLFSRWMENRANVERLRFWFEARLGTAPGVDPIDDEI*
Coding	>OphauG2\|1005 ATGTCCGTGTCGCTCCTTGCTGCAGCTCTGCTGCTAGCTCCCGCCGTGTCCGCCGACCGGCTGCTGGGCTTCAAC AGCGCTCCGCTCCTGGAAACTCGCTCCCTTGACCAAATCTACCAAGCCGCACTAGCCGAAGGCGGCAGAGTCGTC TGTTGGCACGGCGGCGACGAAAGGAATCAACAAGACGCGCTCAAGCGCGCCTTTGAAGCCCGGTTCCCAAACATG ACGCTCGACATCTCCGTCGACCTGTCCAAGTACCACGACGTGCGCATTGACGAGCAGCTCGCAGTCGGCAACGTC ACTGTCGACAGCGTCATTCTGCAAACCGTCCACGACTACCCCCGCTGGGCTCAGCAGGGCGCCCTGCTCAACTAT GCGCCCCAGGGCTTCGACCAGATCCACGACGACTTCAAGGACTCGGTTTCCGCTTCCTACTATGGCCTCGAGGTC TTTTACTGGCAGAGCATCTGGAACACCCAAAAGACGGACGGCGCCACCTTTTCCACATTTGCCGATTACCTGCGC CCCGAGTTCAAGGACAAGCTCGTCCTCACCTATCCCAACGACGACGACGCCGTCCTCTTTGCCTTTGACATGATT ATGCAGCGCAACGGCACCCAGTTCTTCGACGACTTGCTGGCCCAGAACCCTCACTGGGTTCGCGGCACCGCCACC CCTCTAACCCTCGTCAGCCAGGACAACAACTCCTACGCCGCCACCTTTACCAGCGCCGCCGGCTTCAAGCCCGAG CAGCAATCCATAAACGTCGCCTTTCCCACCGACGCCATGTCCGTCACCTGGGCCCAGCTCGGCGCCATCATGGCC CAGGCCCCTCACCCCGAAGGCGCCAAGCTGCTGCACAACTACATGCTGTCCCCCGAATTCCAAGAATCCCTCGGC GGCTGGAGCGTGCGCCGCGACGTCCCAAACCCCGAGGGCGTCCCAGACTTGTGGTCCAGCCCAAACCTCAACCCG ACGCTCTTTAGCCGCTGGATGGAGAACCGCGCCAATGTCGAGCGACTGCGCTTCTGGTTTGAGGCGCGCCTCGGC ACTGCTCCGGGCGTGGATCCTATCGACGATGAGATTTAA
Transcript	>OphauG2\|1005 ATGTCCGTGTCGCTCCTTGCTGCAGCTCTGCTGCTAGCTCCCGCCGTGTCCGCCGACCGGCTGCTGGGCTTCAAC AGCGCTCCGCTCCTGGAAACTCGCTCCCTTGACCAAATCTACCAAGCCGCACTAGCCGAAGGCGGCAGAGTCGTC TGTTGGCACGGCGGCGACGAAAGGAATCAACAAGACGCGCTCAAGCGCGCCTTTGAAGCCCGGTTCCCAAACATG ACGCTCGACATCTCCGTCGACCTGTCCAAGTACCACGACGTGCGCATTGACGAGCAGCTCGCAGTCGGCAACGTC ACTGTCGACAGCGTCATTCTGCAAACCGTCCACGACTACCCCCGCTGGGCTCAGCAGGGCGCCCTGCTCAACTAT GCGCCCCAGGGCTTCGACCAGATCCACGACGACTTCAAGGACTCGGTTTCCGCTTCCTACTATGGCCTCGAGGTC TTTTACTGGCAGAGCATCTGGAACACCCAAAAGACGGACGGCGCCACCTTTTCCACATTTGCCGATTACCTGCGC CCCGAGTTCAAGGACAAGCTCGTCCTCACCTATCCCAACGACGACGACGCCGTCCTCTTTGCCTTTGACATGATT ATGCAGCGCAACGGCACCCAGTTCTTCGACGACTTGCTGGCCCAGAACCCTCACTGGGTTCGCGGCACCGCCACC CCTCTAACCCTCGTCAGCCAGGACAACAACTCCTACGCCGCCACCTTTACCAGCGCCGCCGGCTTCAAGCCCGAG CAGCAATCCATAAACGTCGCCTTTCCCACCGACGCCATGTCCGTCACCTGGGCCCAGCTCGGCGCCATCATGGCC CAGGCCCCTCACCCCGAAGGCGCCAAGCTGCTGCACAACTACATGCTGTCCCCCGAATTCCAAGAATCCCTCGGC GGCTGGAGCGTGCGCCGCGACGTCCCAAACCCCGAGGGCGTCCCAGACTTGTGGTCCAGCCCAAACCTCAACCCG ACGCTCTTTAGCCGCTGGATGGAGAACCGCGCCAATGTCGAGCGACTGCGCTTCTGGTTTGAGGCGCGCCTCGGC ACTGCTCCGGGCGTGGATCCTATCGACGATGAGATTTAA
Gene	>OphauG2\|1005 ATGTCCGTGTCGCTCCTTGCTGCAGCTCTGCTGCTAGCTCCCGCCGTGTCCGCCGACCGGCTGCTGGGCTTCAAC AGCGCTCCGCTCCTGGAAACTCGCTCCCTTGACCAAATCTACCAAGCCGCACTAGCCGAAGGCGGCAGAGTCGTC TGTTGGCACGGCGGCGACGAAAGGAATCAACAAGACGCGCTCAAGCGCGCCTTTGAAGCCCGGTTCCCAAACATG ACGCTCGACATCTCCGTCGACCTGTCCAAGTACCACGACGTGCGCATTGACGAGCAGCTCGCAGTCGGCAACGTC ACTGTCGACAGCGTCATTCTGCAAACCGTCCACGACTACCCCCGCTGGGCTCAGCAGGGCGCCCTGCTCAACTAT GCGCCCCAGGGCTTCGACCAGATCCACGACGACTTCAAGGACTCGGTTTCCGCTTCCTACTATGGCCTCGAGGTC TTTTACTGGCAGAGCATCTGGAACACCCAAAAGACGGACGGCGCCACCTTTTCCACATTTGCCGATTACCTGCGC CCCGAGTTCAAGGACAAGCTCGTCCTCACCTATCCCAACGACGACGACGCCGTCCTCTTTGCCTTTGACATGATT ATGCAGCGCAACGGCACCCAGTTCTTCGACGACTTGCTGGCCCAGAACCCTCACTGGGTTCGCGGCACCGCCACC CCTCTAACCCTCGTCAGCCAGGACAACAACTCCTACGCCGCCACCTTTACCAGCGCCGCCGGCTTCAAGCCCGAG CAGCAATCCATAAACGTCGCCTTTCCCACCGACGCCATGTCCGTCACCTGGGCCCAGCTCGGCGCCATCATGGCC CAGGCCCCTCACCCCGAAGGCGCCAAGCTGCTGCACAACTACATGCTGTCCCCCGAATTCCAAGAATCCCTCGGC GGCTGGAGCGTGCGCCGCGACGTCCCAAACCCCGAGGGCGTCCCAGACTTGTGGTCCAGCCCAAACCTCAACCCG ACGCTCTTTAGCCGCTGGATGGAGAACCGCGCCAATGTCGAGCGACTGCGCTTCTGGTTTGAGGCGCGCCTCGGC ACTGCTCCGGGCGTGGATCCTATCGACGATGAGATTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail