Fungal Genomics

at Utrecht University

PFAM Domain


General information

PFAM domainPF04851
Short nameResIII
Long nameType III restriction enzyme, res subunit
Proteins with at least one of this domain35
Total domain count36
More informationPFAM website

Proteins with this PFAM domain

Note: all PFAM domains are shown for these proteins
Short name Long name E-value Start End Name
protein ID PFAM
OphauG2|1059 PF04851 ResIII Type III restriction enzyme, res subunit 8.1E-14 142 309
PF00270 DEAD DEAD/DEAH box helicase 2.9E-12 152 290
PF00271 Helicase_C Helicase conserved C-terminal domain 1.5E-16 484 596
PF03368 Dicer_dimer Dicer dimerisation domain 4.4E-21 675 761
PF14622 Ribonucleas_3_3 Ribonuclease-III-like 5.2E-09 1070 1211
PF00636 Ribonuclease_3 Ribonuclease III domain 9.6E-21 1103 1209
PF14622 Ribonucleas_3_3 Ribonuclease-III-like 3.5E-16 1275 1429
PF00636 Ribonuclease_3 Ribonuclease III domain 2.6E-21 1296 1415
OphauG2|1377 PF00270 DEAD DEAD/DEAH box helicase 4.4E-41 119 293
PF04851 ResIII Type III restriction enzyme, res subunit 1.1E-05 140 288
PF00271 Helicase_C Helicase conserved C-terminal domain 1.4E-29 341 445
OphauG2|1471 PF08658 Rad54_N Rad54 N terminal 8.3E-48 28 191
PF04851 ResIII Type III restriction enzyme, res subunit 1.8E-10 213 391
PF00176 SNF2-rel_dom SNF2-related domain 5.1E-63 216 523
PF00271 Helicase_C Helicase conserved C-terminal domain 4.1E-15 564 673
OphauG2|1769 PF00176 SNF2-rel_dom SNF2-related domain 1.0E-71 352 664
PF04851 ResIII Type III restriction enzyme, res subunit 3.6E-07 352 531
PF00271 Helicase_C Helicase conserved C-terminal domain 1.1E-14 697 797
OphauG2|2372 PF00176 SNF2-rel_dom SNF2-related domain 4.6E-66 207 454
PF04851 ResIII Type III restriction enzyme, res subunit 3.4E-05 227 390
PF00270 DEAD DEAD/DEAH box helicase 8.5E-06 236 368
OphauG2|2414 PF04851 ResIII Type III restriction enzyme, res subunit 9.9E-10 181 341
PF00176 SNF2-rel_dom SNF2-related domain 1.0E-81 191 465
PF00271 Helicase_C Helicase conserved C-terminal domain 7.3E-18 488 600
PF09110 HAND HAND 2.4E-33 753 857
PF09111 SLIDE SLIDE 1.5E-31 915 1010
OphauG2|2853 PF04851 ResIII Type III restriction enzyme, res subunit 1.5E-06 933 1107
PF00176 SNF2-rel_dom SNF2-related domain 1.0E-40 937 1234
PF00271 Helicase_C Helicase conserved C-terminal domain 1.9E-22 1289 1396
OphauG2|3424 PF15446 zf-PHD-like PHD/FYVE-zinc-finger like domain 2.7E-66 447 615
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 4.9E-06 640 670
PF04851 ResIII Type III restriction enzyme, res subunit 2.2E-06 817 983
PF00176 SNF2-rel_dom SNF2-related domain 1.7E-55 833 1106
PF11496 HDA2-3 Class II histone deacetylase complex subunits 2 and 3 2.2E-06 1049 1268
PF00271 Helicase_C Helicase conserved C-terminal domain 2.2E-18 1132 1244
OphauG2|3632 PF00270 DEAD DEAD/DEAH box helicase 4.0E-15 726 887
PF04851 ResIII Type III restriction enzyme, res subunit 3.7E-11 731 886
PF00271 Helicase_C Helicase conserved C-terminal domain 1.6E-06 1230 1307
OphauG2|3676 PF00270 DEAD DEAD/DEAH box helicase 7.9E-46 107 271
PF04851 ResIII Type III restriction enzyme, res subunit 2.8E-06 127 268
PF00271 Helicase_C Helicase conserved C-terminal domain 4.5E-24 358 453
PF08147 DBP10CT DBP10CT (NUC160) domain 7.3E-19 733 800
OphauG2|3730 PF08880 QLQ QLQ 2.4E-10 187 220
PF07529 HSA HSA domain 5.5E-18 422 492
PF04851 ResIII Type III restriction enzyme, res subunit 2.0E-10 589 748
PF00176 SNF2-rel_dom SNF2-related domain 2.1E-78 592 885
PF00271 Helicase_C Helicase conserved C-terminal domain 1.8E-18 909 1022
PF14619 SnAC Snf2-ATP coupling, chromatin remodelling complex 7.6E-16 1129 1186
PF00439 Bromodomain Bromodomain 3.4E-18 1330 1401
OphauG2|3751 PF00270 DEAD DEAD/DEAH box helicase 1.0E-15 172 330
PF04851 ResIII Type III restriction enzyme, res subunit 2.0E-21 172 325
PF00271 Helicase_C Helicase conserved C-terminal domain 8.4E-20 525 633
OphauG2|3754 PF04851 ResIII Type III restriction enzyme, res subunit 9.1E-08 814 986
PF00270 DEAD DEAD/DEAH box helicase 4.1E-21 818 990
PF00271 Helicase_C Helicase conserved C-terminal domain 7.7E-13 1034 1136
PF16124 RecQ_Zn_bind RecQ zinc-binding 4.7E-15 1149 1214
PF09382 RQC RQC domain 4.6E-17 1219 1332
OphauG2|3762 PF00270 DEAD DEAD/DEAH box helicase 7.6E-38 80 248
PF04851 ResIII Type III restriction enzyme, res subunit 3.2E-07 96 244
PF00271 Helicase_C Helicase conserved C-terminal domain 9.1E-25 286 394
OphauG2|4430 PF04851 ResIII Type III restriction enzyme, res subunit 7.7E-23 19 181
PF00270 DEAD DEAD/DEAH box helicase 5.3E-08 23 184
PF00271 Helicase_C Helicase conserved C-terminal domain 1.6E-13 260 358
OphauG2|4498 PF00270 DEAD DEAD/DEAH box helicase 2.6E-49 177 347
PF04851 ResIII Type III restriction enzyme, res subunit 1.3E-05 197 340
PF00271 Helicase_C Helicase conserved C-terminal domain 3.5E-31 389 495
OphauG2|4698 PF00270 DEAD DEAD/DEAH box helicase 1.7E-16 7 161
PF04851 ResIII Type III restriction enzyme, res subunit 8.2E-11 9 161
PF00271 Helicase_C Helicase conserved C-terminal domain 4.8E-16 348 466
PF03368 Dicer_dimer Dicer dimerisation domain 1.4E-22 535 626
PF14622 Ribonucleas_3_3 Ribonuclease-III-like 1.3E-09 917 1043
PF00636 Ribonuclease_3 Ribonuclease III domain 3.5E-18 921 1031
PF00636 Ribonuclease_3 Ribonuclease III domain 1.6E-15 1110 1253
OphauG2|4959 PF04851 ResIII Type III restriction enzyme, res subunit 5.9E-08 140 308
PF00176 SNF2-rel_dom SNF2-related domain 6.5E-70 158 452
PF00271 Helicase_C Helicase conserved C-terminal domain 1.6E-18 591 702
OphauG2|5330 PF13086 AAA_11 AAA domain 1.3E-59 207 422
PF13604 AAA_30 AAA domain 1.8E-11 207 418
PF04851 ResIII Type III restriction enzyme, res subunit 1.9E-05 208 389
PF13245 AAA_19 AAA domain 6.0E-08 212 418
PF09848 DUF2075 Schlafen group 3, DNA/RNA helicase domain 1.2E-04 224 394
PF13087 AAA_12 AAA domain 2.9E-54 450 660
OphauG2|5437 PF00270 DEAD DEAD/DEAH box helicase 5.1E-26 287 473
PF04851 ResIII Type III restriction enzyme, res subunit 3.9E-08 298 470
PF02889 Sec63 Sec63 Brl domain 8.9E-81 798 1101
PF00270 DEAD DEAD/DEAH box helicase 2.1E-20 1147 1309
PF04851 ResIII Type III restriction enzyme, res subunit 1.4E-09 1158 1308
PF00271 Helicase_C Helicase conserved C-terminal domain 3.0E-06 1423 1510
PF02889 Sec63 Sec63 Brl domain 4.1E-40 1637 1943
OphauG2|5955 PF00270 DEAD DEAD/DEAH box helicase 1.6E-31 132 350
PF04851 ResIII Type III restriction enzyme, res subunit 5.5E-06 132 325
PF00271 Helicase_C Helicase conserved C-terminal domain 4.6E-19 420 535
OphauG2|598 PF13625 Helicase_C_3 Helicase conserved C-terminal domain 2.2E-34 101 225
PF04851 ResIII Type III restriction enzyme, res subunit 9.4E-15 338 495
PF16203 ERCC3_RAD25_C ERCC3/RAD25/XPB C-terminal helicase 5.9E-125 521 756
PF00271 Helicase_C Helicase conserved C-terminal domain 5.6E-11 565 671
OphauG2|6080 PF04851 ResIII Type III restriction enzyme, res subunit 6.7E-05 145 327
PF00270 DEAD DEAD/DEAH box helicase 1.2E-15 153 329
OphauG2|6087 PF00270 DEAD DEAD/DEAH box helicase 4.6E-45 21 185
PF04851 ResIII Type III restriction enzyme, res subunit 2.1E-06 30 180
PF00271 Helicase_C Helicase conserved C-terminal domain 8.4E-31 222 330
OphauG2|6542 PF04851 ResIII Type III restriction enzyme, res subunit 8.8E-09 905 1065
PF00176 SNF2-rel_dom SNF2-related domain 2.0E-70 924 1204
PF00271 Helicase_C Helicase conserved C-terminal domain 2.9E-18 1467 1579
OphauG2|6679 PF08839 CDT1 DNA replication factor CDT1 like 5.1E-05 18 106
PF04851 ResIII Type III restriction enzyme, res subunit 1.4E-08 318 460
PF00270 DEAD DEAD/DEAH box helicase 1.4E-24 322 496
PF00271 Helicase_C Helicase conserved C-terminal domain 8.9E-10 553 662
PF09369 MZB MrfA Zn-binding domain 5.6E-21 926 1015
OphauG2|6684 PF04851 ResIII Type III restriction enzyme, res subunit 4.7E-07 73 236
PF00270 DEAD DEAD/DEAH box helicase 3.2E-46 74 243
PF00271 Helicase_C Helicase conserved C-terminal domain 3.5E-26 281 390
PF13959 DUF4217 Domain of unknown function (DUF4217) 1.2E-22 432 492
OphauG2|6724 PF00176 SNF2-rel_dom SNF2-related domain 3.5E-52 366 698
PF04851 ResIII Type III restriction enzyme, res subunit 1.0E-07 367 531
PF00097 zf-C3HC4 Zinc finger, C3HC4 type (RING finger) 3.3E-06 712 751
PF00271 Helicase_C Helicase conserved C-terminal domain 9.7E-09 790 886
OphauG2|6786 PF09416 UPF1_Zn_bind RNA helicase (UPF2 interacting domain) 3.8E-69 93 243
PF18141 UPF1_1B_dom RNA helicase UPF1, 1B domain 1.7E-31 297 391
PF04851 ResIII Type III restriction enzyme, res subunit 2.0E-06 448 516
PF13086 AAA_11 AAA domain 5.2E-22 448 543
PF13604 AAA_30 AAA domain 3.4E-11 448 646
PF13245 AAA_19 AAA domain 1.0E-10 452 644
PF05127 Helicase_RecD Helicase 4.2E-05 467 556
PF13086 AAA_11 AAA domain 1.7E-30 549 650
PF13087 AAA_12 AAA domain 2.6E-57 657 853
OphauG2|6796 PF00176 SNF2-rel_dom SNF2-related domain 7.3E-25 221 376
PF04851 ResIII Type III restriction enzyme, res subunit 1.2E-09 236 371
PF00270 DEAD DEAD/DEAH box helicase 1.8E-06 246 375
OphauG2|7091 PF00176 SNF2-rel_dom SNF2-related domain 4.3E-70 214 545
PF04851 ResIII Type III restriction enzyme, res subunit 9.7E-06 234 397
PF00270 DEAD DEAD/DEAH box helicase 1.3E-05 244 375
PF00271 Helicase_C Helicase conserved C-terminal domain 9.3E-15 815 925
OphauG2|7769 PF00176 SNF2-rel_dom SNF2-related domain 4.0E-66 346 677
PF04851 ResIII Type III restriction enzyme, res subunit 5.2E-10 376 558
PF00271 Helicase_C Helicase conserved C-terminal domain 1.8E-09 810 921
OphauG2|7792 PF04851 ResIII Type III restriction enzyme, res subunit 6.0E-06 358 541
PF00176 SNF2-rel_dom SNF2-related domain 1.0E-63 371 679
PF00271 Helicase_C Helicase conserved C-terminal domain 2.0E-15 925 1039
OphauG2|7987 PF00270 DEAD DEAD/DEAH box helicase 3.5E-29 264 464
PF04851 ResIII Type III restriction enzyme, res subunit 8.0E-06 264 341
PF00271 Helicase_C Helicase conserved C-terminal domain 1.2E-17 505 622
OphauG2|852 PF00270 DEAD DEAD/DEAH box helicase 9.6E-17 166 312
PF04851 ResIII Type III restriction enzyme, res subunit 8.7E-05 176 311
PF00271 Helicase_C Helicase conserved C-terminal domain 8.1E-06 487 563
PF13234 rRNA_proc-arch rRNA-processing arch domain 7.4E-89 617 894
PF08148 DSHCT DSHCT (NUC185) domain 1.6E-45 922 1091

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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