Fungal Genomics

at Utrecht University

PFAM domains

PFAM domain Count Short name Long name
PF00001 1 7tm_1 7 transmembrane receptor (rhodopsin family)
PF00002 4 7tm_2 7 transmembrane receptor (Secretin family)
PF00004 52 AAA ATPase family associated with various cellular activities (AAA)
PF00005 63 ABC_tran ABC transporter
PF00006 5 ATP-synt_ab ATP synthase alpha/beta family, nucleotide-binding domain
PF00009 18 GTP_EFTU Elongation factor Tu GTP binding domain
PF00010 9 HLH Helix-loop-helix DNA-binding domain
PF00011 1 HSP20 Hsp20/alpha crystallin family
PF00012 10 HSP70 Hsp70 protein
PF00013 19 KH_1 KH domain
PF00017 1 SH2 SH2 domain
PF00018 23 SH3_1 SH3 domain
PF00022 11 Actin Actin
PF00023 62 Ank Ankyrin repeat
PF00025 32 Arf ADP-ribosylation factor family
PF00026 18 Asp Eukaryotic aspartyl protease
PF00027 6 cNMP_binding Cyclic nucleotide-binding domain
PF00030 1 Crystall Beta/Gamma crystallin
PF00034 1 Cytochrom_C Cytochrome c
PF00036 11 EF-hand_1 EF hand
PF00037 3 Fer4 4Fe-4S binding domain
PF00042 1 Globin Globin
PF00043 6 GST_C Glutathione S-transferase, C-terminal domain
PF00044 1 Gp_dh_N Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
PF00046 7 Homeodomain Homeodomain
PF00056 2 Ldh_1_N lactate/malate dehydrogenase, NAD binding domain
PF00063 5 Myosin_head Myosin head (motor domain)
PF00067 66 p450 Cytochrome P450
PF00069 98 Pkinase Protein kinase domain
PF00070 11 Pyr_redox Pyridine nucleotide-disulphide oxidoreductase
PF00071 37 Ras Ras family
PF00072 9 Response_reg Response regulator receiver domain
PF00075 1 RNase_H RNase H
PF00076 88 RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
PF00077 1 RVP Retroviral aspartyl protease
PF00078 1 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase)
PF00080 3 Sod_Cu Copper/zinc superoxide dismutase (SODC)
PF00081 2 Sod_Fe_N Iron/manganese superoxide dismutases, alpha-hairpin domain
PF00082 23 Peptidase_S8 Subtilase family
PF00083 84 Sugar_tr Sugar (and other) transporter
PF00085 13 Thioredoxin Thioredoxin
PF00091 4 Tubulin Tubulin/FtsZ family, GTPase domain
PF00092 2 VWA von Willebrand factor type A domain
PF00096 48 zf-C2H2 Zinc finger, C2H2 type
PF00097 22 zf-C3HC4 Zinc finger, C3HC4 type (RING finger)
PF00098 21 zf-CCHC Zinc knuckle
PF00102 3 Y_phosphatase Protein-tyrosine phosphatase
PF00106 55 adh_short short chain dehydrogenase
PF00107 22 ADH_zinc_N Zinc-binding dehydrogenase
PF00108 8 Thiolase_N Thiolase, N-terminal domain
PF00109 17 ketoacyl-synt Beta-ketoacyl synthase, N-terminal domain
PF00111 3 Fer2 2Fe-2S iron-sulfur cluster binding domain
PF00113 1 Enolase_C Enolase, C-terminal TIM barrel domain
PF00117 7 GATase Glutamine amidotransferase class-I
PF00118 10 Cpn60_TCP1 TCP-1/cpn60 chaperonin family
PF00120 3 Gln-synt_C Glutamine synthetase, catalytic domain
PF00121 2 TIM Triosephosphate isomerase
PF00122 18 E1-E2_ATPase E1-E2 ATPase
PF00125 6 Histone Core histone H2A/H2B/H3/H4
PF00128 1 Alpha-amylase Alpha amylase, catalytic domain
PF00130 3 C1_1 Phorbol esters/diacylglycerol binding domain (C1 domain)
PF00132 7 Hexapep Bacterial transferase hexapeptide (six repeats)
PF00133 10 tRNA-synt_1 tRNA synthetases class I (I, L, M and V)
PF00134 8 Cyclin_N Cyclin, N-terminal domain
PF00135 12 COesterase Carboxylesterase family
PF00136 4 DNA_pol_B DNA polymerase family B
PF00137 7 ATP-synt_C ATP synthase subunit C
PF00141 5 peroxidase Peroxidase
PF00144 4 Beta-lactamase Beta-lactamase
PF00145 3 DNA_methylase C-5 cytosine-specific DNA methylase
PF00149 23 Metallophos Calcineurin-like phosphoesterase
PF00150 4 Cellulase Cellulase (glycosyl hydrolase family 5)
PF00152 7 tRNA-synt_2 tRNA synthetases class II (D, K and N)
PF00153 101 Mito_carr Mitochondrial carrier protein
PF00154 3 RecA recA bacterial DNA recombination protein
PF00155 19 Aminotran_1_2 Aminotransferase class I and II
PF00156 6 Pribosyltran Phosphoribosyl transferase domain
PF00158 1 Sigma54_activat Sigma-54 interaction domain
PF00160 9 Pro_isomerase Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
PF00162 2 PGK Phosphoglycerate kinase
PF00163 2 Ribosomal_S4 Ribosomal protein S4/S9 N-terminal domain
PF00164 2 Ribosom_S12_S23 Ribosomal protein S12/S23
PF00166 1 Cpn10 Chaperonin 10 Kd subunit
PF00168 16 C2 C2 domain
PF00169 15 PH PH domain
PF00170 9 bZIP_1 bZIP transcription factor
PF00171 15 Aldedh Aldehyde dehydrogenase family
PF00172 93 Zn_clus Fungal Zn(2)-Cys(6) binuclear cluster domain
PF00173 18 Cyt-b5 Cytochrome b5-like Heme/Steroid binding domain
PF00174 3 Oxidored_molyb Oxidoreductase molybdopterin binding domain
PF00175 10 NAD_binding_1 Oxidoreductase NAD-binding domain
PF00176 23 SNF2_N SNF2 family N-terminal domain
PF00177 2 Ribosomal_S7 Ribosomal protein S7p/S5e
PF00179 20 UQ_con Ubiquitin-conjugating enzyme
PF00180 5 Iso_dh Isocitrate/isopropylmalate dehydrogenase
PF00181 2 Ribosomal_L2 Ribosomal Proteins L2, RNA binding domain
PF00183 1 HSP90 Hsp90 protein
PF00185 2 OTCace Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
PF00186 1 DHFR_1 Dihydrofolate reductase
PF00188 3 CAP Cysteine-rich secretory protein family
PF00189 1 Ribosomal_S3_C Ribosomal protein S3, C-terminal domain
PF00190 3 Cupin_1 Cupin
PF00191 6 Annexin Annexin
PF00198 3 2-oxoacid_dh 2-oxoacid dehydrogenases acyltransferase (catalytic domain)
PF00199 3 Catalase Catalase
PF00200 1 Disintegrin Disintegrin
PF00201 3 UDPGT UDP-glucoronosyl and UDP-glucosyl transferase
PF00202 7 Aminotran_3 Aminotransferase class-III
PF00203 2 Ribosomal_S19 Ribosomal protein S19
PF00204 1 DNA_gyraseB DNA gyrase B
PF00205 2 TPP_enzyme_M Thiamine pyrophosphate enzyme, central domain
PF00206 3 Lyase_1 Lyase
PF00208 2 ELFV_dehydrog Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
PF00211 1 Guanylate_cyc Adenylate and Guanylate cyclase catalytic domain
PF00213 1 OSCP ATP synthase delta (OSCP) subunit
PF00215 1 OMPdecase Orotidine 5'-phosphate decarboxylase / HUMPS family
PF00218 1 IGPS Indole-3-glycerol phosphate synthase
PF00221 3 Lyase_aromatic Aromatic amino acid lyase
PF00224 1 PK Pyruvate kinase, barrel domain
PF00225 9 Kinesin Kinesin motor domain
PF00226 23 DnaJ DnaJ domain
PF00227 16 Proteasome Proteasome subunit
PF00230 2 MIP Major intrinsic protein
PF00231 1 ATP-synt ATP synthase
PF00232 1 Glyco_hydro_1 Glycosyl hydrolase family 1
PF00233 1 PDEase_I 3'5'-cyclic nucleotide phosphodiesterase
PF00235 1 Profilin Profilin
PF00237 2 Ribosomal_L22 Ribosomal protein L22p/L17e
PF00238 2 Ribosomal_L14 Ribosomal protein L14p/L23e
PF00240 13 ubiquitin Ubiquitin family
PF00241 6 Cofilin_ADF Cofilin/tropomyosin-type actin-binding protein
PF00244 2 14-3-3 14-3-3 protein
PF00245 2 Alk_phosphatase Alkaline phosphatase
PF00246 3 Peptidase_M14 Zinc carboxypeptidase
PF00248 11 Aldo_ket_red Aldo/keto reductase family
PF00249 11 Myb_DNA-binding Myb-like DNA-binding domain
PF00250 2 Forkhead Forkhead domain
PF00251 1 Glyco_hydro_32N Glycosyl hydrolases family 32 N-terminal domain
PF00252 2 Ribosomal_L16 Ribosomal protein L16p/L10e
PF00254 3 FKBP_C FKBP-type peptidyl-prolyl cis-trans isomerase
PF00255 1 GSHPx Glutathione peroxidase
PF00258 6 Flavodoxin_1 Flavodoxin
PF00262 1 Calreticulin Calreticulin family
PF00264 3 Tyrosinase Common central domain of tyrosinase
PF00266 13 Aminotran_5 Aminotransferase class-V
PF00268 1 Ribonuc_red_sm Ribonucleotide reductase, small chain
PF00270 50 DEAD DEAD/DEAH box helicase
PF00271 67 Helicase_C Helicase conserved C-terminal domain
PF00275 2 EPSP_synthase EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
PF00276 2 Ribosomal_L23 Ribosomal protein L23
PF00278 1 Orn_DAP_Arg_deC Pyridoxal-dependent decarboxylase, C-terminal sheet domain
PF00281 2 Ribosomal_L5 Ribosomal protein L5
PF00282 7 Pyridoxal_deC Pyridoxal-dependent decarboxylase conserved domain
PF00285 4 Citrate_synt Citrate synthase, C-terminal domain
PF00288 5 GHMP_kinases_N GHMP kinases N terminal domain
PF00289 4 Biotin_carb_N Biotin carboxylase, N-terminal domain
PF00290 1 Trp_syntA Tryptophan synthase alpha chain
PF00291 13 PALP Pyridoxal-phosphate dependent enzyme
PF00293 10 NUDIX NUDIX domain
PF00294 4 PfkB pfkB family carbohydrate kinase
PF00295 1 Glyco_hydro_28 Glycosyl hydrolases family 28
PF00296 1 Bac_luciferase Luciferase-like monooxygenase
PF00297 2 Ribosomal_L3 Ribosomal protein L3
PF00298 2 Ribosomal_L11 Ribosomal protein L11, RNA binding domain
PF00300 9 His_Phos_1 Histidine phosphatase superfamily (branch 1)
PF00303 1 Thymidylat_synt Thymidylate synthase
PF00306 1 ATP-synt_ab_C ATP synthase alpha/beta chain, C terminal domain
PF00307 9 CH Calponin homology (CH) domain
PF00310 1 GATase_2 Glutamine amidotransferases class-II
PF00312 2 Ribosomal_S15 Ribosomal protein S15
PF00314 1 Thaumatin Thaumatin family
PF00316 1 FBPase Fructose-1-6-bisphosphatase, N-terminal domain
PF00317 1 Ribonuc_red_lgN Ribonucleotide reductase, all-alpha domain
PF00318 3 Ribosomal_S2 Ribosomal protein S2
PF00319 2 SRF-TF SRF-type transcription factor (DNA-binding and dimerisation domain)
PF00320 6 GATA GATA zinc finger
PF00324 23 AA_permease Amino acid permease
PF00326 5 Peptidase_S9 Prolyl oligopeptidase family
PF00327 2 Ribosomal_L30 Ribosomal protein L30p/L7e
PF00328 4 His_Phos_2 Histidine phosphatase superfamily (branch 2)
PF00329 1 Complex1_30kDa Respiratory-chain NADH dehydrogenase, 30 Kd subunit
PF00330 4 Aconitase Aconitase family (aconitate hydratase)
PF00332 1 Glyco_hydro_17 Glycosyl hydrolases family 17
PF00333 2 Ribosomal_S5 Ribosomal protein S5, N-terminal domain
PF00334 1 NDK Nucleoside diphosphate kinase
PF00338 1 Ribosomal_S10 Ribosomal protein S10p/S20e
PF00339 3 Arrestin_N Arrestin (or S-antigen), N-terminal domain
PF00342 1 PGI Phosphoglucose isomerase
PF00343 2 Phosphorylase Carbohydrate phosphorylase
PF00344 1 SecY SecY translocase
PF00346 1 Complex1_49kDa Respiratory-chain NADH dehydrogenase, 49 Kd subunit
PF00347 4 Ribosomal_L6 Ribosomal protein L6
PF00348 4 polyprenyl_synt Polyprenyl synthetase
PF00349 4 Hexokinase_1 Hexokinase
PF00350 8 Dynamin_N Dynamin family
PF00352 2 TBP Transcription factor TFIID (or TATA-binding protein, TBP)
PF00355 3 Rieske Rieske [2Fe-2S] domain
PF00360 1 PHY Phytochrome region
PF00364 8 Biotin_lipoyl Biotin-requiring enzyme
PF00365 2 PFK Phosphofructokinase
PF00366 2 Ribosomal_S17 Ribosomal protein S17
PF00368 1 HMG-CoA_red Hydroxymethylglutaryl-coenzyme A reductase
PF00370 4 FGGY_N FGGY family of carbohydrate kinases, N-terminal domain
PF00378 7 ECH_1 Enoyl-CoA hydratase/isomerase
PF00380 2 Ribosomal_S9 Ribosomal protein S9/S16
PF00382 4 TFIIB Transcription factor TFIIB repeat
PF00383 6 dCMP_cyt_deam_1 Cytidine and deoxycytidylate deaminase zinc-binding region
PF00384 1 Molybdopterin Molybdopterin oxidoreductase
PF00385 8 Chromo Chromo (CHRromatin Organisation MOdifier) domain
PF00387 4 PI-PLC-Y Phosphatidylinositol-specific phospholipase C, Y domain
PF00388 4 PI-PLC-X Phosphatidylinositol-specific phospholipase C, X domain
PF00389 7 2-Hacid_dh D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
PF00390 1 malic Malic enzyme, N-terminal domain
PF00393 2 6PGD 6-phosphogluconate dehydrogenase, C-terminal domain
PF00394 5 Cu-oxidase Multicopper oxidase
PF00397 12 WW WW domain
PF00398 1 RrnaAD Ribosomal RNA adenine dimethylase
PF00399 2 PIR Yeast PIR protein repeat
PF00400 275 WD40 WD domain, G-beta repeat
PF00403 7 HMA Heavy-metal-associated domain
PF00406 4 ADK Adenylate kinase
PF00408 1 PGM_PMM_IV Phosphoglucomutase/phosphomannomutase, C-terminal domain
PF00410 1 Ribosomal_S8 Ribosomal protein S8
PF00411 2 Ribosomal_S11 Ribosomal protein S11
PF00412 8 LIM LIM domain
PF00415 18 RCC1 Regulator of chromosome condensation (RCC1) repeat
PF00416 2 Ribosomal_S13 Ribosomal protein S13/S18
PF00425 2 Chorismate_bind chorismate binding enzyme
PF00428 3 Ribosomal_60s 60s Acidic ribosomal protein
PF00432 18 Prenyltrans Prenyltransferase and squalene oxidase repeat
PF00433 4 Pkinase_C Protein kinase C terminal domain
PF00436 1 SSB Single-strand binding protein family
PF00438 1 S-AdoMet_synt_N S-adenosylmethionine synthetase, N-terminal domain
PF00439 9 Bromodomain Bromodomain
PF00441 9 Acyl-CoA_dh_1 Acyl-CoA dehydrogenase, C-terminal domain
PF00443 14 UCH Ubiquitin carboxyl-terminal hydrolase
PF00445 1 Ribonuclease_T2 Ribonuclease T2 family
PF00447 3 HSF_DNA-bind HSF-type DNA-binding
PF00448 3 SRP54 SRP54-type protein, GTPase domain
PF00449 1 Urease_alpha Urease alpha-subunit, N-terminal domain
PF00450 6 Peptidase_S10 Serine carboxypeptidase
PF00454 8 PI3_PI4_kinase Phosphatidylinositol 3- and 4-kinase
PF00456 1 Transketolase_N Transketolase, thiamine diphosphate binding domain
PF00459 4 Inositol_P Inositol monophosphatase family
PF00462 4 Glutaredoxin Glutaredoxin
PF00463 2 ICL Isocitrate lyase family
PF00464 2 SHMT Serine hydroxymethyltransferase
PF00465 3 Fe-ADH Iron-containing alcohol dehydrogenase
PF00466 2 Ribosomal_L10 Ribosomal protein L10
PF00467 2 KOW KOW motif
PF00468 1 Ribosomal_L34 Ribosomal protein L34
PF00472 3 RF-1 RF-1 domain
PF00474 1 SSF Sodium:solute symporter family
PF00475 1 IGPD Imidazoleglycerol-phosphate dehydratase
PF00476 1 DNA_pol_A DNA polymerase family A
PF00478 5 IMPDH IMP dehydrogenase / GMP reductase domain
PF00479 1 G6PD_N Glucose-6-phosphate dehydrogenase, NAD binding domain
PF00481 6 PP2C Protein phosphatase 2C
PF00483 3 NTP_transferase Nucleotidyl transferase
PF00484 1 Pro_CA Carbonic anhydrase
PF00485 2 PRK Phosphoribulokinase / Uridine kinase family
PF00487 5 FA_desaturase Fatty acid desaturase
PF00488 6 MutS_V MutS domain V
PF00490 1 ALAD Delta-aminolevulinic acid dehydratase
PF00491 3 Arginase Arginase family
PF00493 6 MCM MCM P-loop domain
PF00494 3 SQS_PSY Squalene/phytoene synthase
PF00498 9 FHA FHA domain
PF00501 47 AMP-binding AMP-binding enzyme
PF00503 3 G-alpha G-protein alpha subunit
PF00505 5 HMG_box HMG (high mobility group) box
PF00512 6 HisKA His Kinase A (phospho-acceptor) domain
PF00514 13 Arm Armadillo/beta-catenin-like repeat
PF00515 7 TPR_1 Tetratricopeptide repeat
PF00520 7 Ion_trans Ion transport protein
PF00521 1 DNA_topoisoIV DNA gyrase/topoisomerase IV, subunit A
PF00533 10 BRCT BRCA1 C Terminus (BRCT) domain
PF00534 4 Glycos_transf_1 Glycosyl transferases group 1
PF00535 5 Glycos_transf_2 Glycosyl transferase family 2
PF00536 3 SAM_1 SAM domain (Sterile alpha motif)
PF00538 1 Linker_histone linker histone H1 and H5 family
PF00542 1 Ribosomal_L12 Ribosomal protein L7/L12 C-terminal domain
PF00545 1 Ribonuclease ribonuclease
PF00547 1 Urease_gamma Urease, gamma subunit
PF00549 5 Ligase_CoA CoA-ligase
PF00550 37 PP-binding Phosphopantetheine attachment site
PF00551 3 Formyl_trans_N Formyl transferase
PF00557 8 Peptidase_M24 Metallopeptidase family M24
PF00561 21 Abhydrolase_1 alpha/beta hydrolase fold
PF00562 3 RNA_pol_Rpb2_6 RNA polymerase Rpb2, domain 6
PF00564 4 PB1 PB1 domain
PF00565 5 SNase Staphylococcal nuclease homologue
PF00566 13 RabGAP-TBC Rab-GTPase-TBC domain
PF00567 1 TUDOR Tudor domain
PF00568 1 WH1 WH1 domain
PF00569 3 ZZ Zinc finger, ZZ type
PF00570 1 HRDC HRDC domain
PF00571 12 CBS CBS domain
PF00572 2 Ribosomal_L13 Ribosomal protein L13
PF00573 2 Ribosomal_L4 Ribosomal protein L4/L1 family
PF00574 1 CLP_protease Clp protease
PF00575 9 S1 S1 RNA binding domain
PF00576 1 Transthyretin HIUase/Transthyretin family
PF00578 4 AhpC-TSA AhpC/TSA family
PF00579 4 tRNA-synt_1b tRNA synthetases class I (W and Y)
PF00580 1 UvrD-helicase UvrD/REP helicase N-terminal domain
PF00581 8 Rhodanese Rhodanese-like domain
PF00582 2 Usp Universal stress protein family
PF00583 17 Acetyltransf_1 Acetyltransferase (GNAT) family
PF00584 1 SecE SecE/Sec61-gamma subunits of protein translocation complex
PF00585 2 Thr_dehydrat_C C-terminal regulatory domain of Threonine dehydratase
PF00586 1 AIRS AIR synthase related protein, N-terminal domain
PF00587 7 tRNA-synt_2b tRNA synthetase class II core domain (G, H, P, S and T)
PF00588 1 SpoU_methylase SpoU rRNA Methylase family
PF00590 2 TP_methylase Tetrapyrrole (Corrin/Porphyrin) Methylases
PF00591 1 Glycos_transf_3 Glycosyl transferase family, a/b domain
PF00596 1 Aldolase_II Class II Aldolase and Adducin N-terminal domain
PF00610 4 DEP Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
PF00611 5 FCH Fes/CIP4, and EFC/F-BAR homology domain
PF00612 4 IQ IQ calmodulin-binding motif
PF00613 2 PI3Ka Phosphoinositide 3-kinase family, accessory domain (PIK domain)
PF00614 4 PLDc Phospholipase D Active site motif
PF00615 4 RGS Regulator of G protein signaling domain
PF00616 4 RasGAP GTPase-activator protein for Ras-like GTPase
PF00617 4 RasGEF RasGEF domain
PF00618 4 RasGEF_N RasGEF N-terminal motif
PF00620 8 RhoGAP RhoGAP domain
PF00621 6 RhoGEF RhoGEF domain
PF00622 2 SPRY SPRY domain
PF00623 3 RNA_pol_Rpb1_2 RNA polymerase Rpb1, domain 2
PF00625 2 Guanylate_kin Guanylate kinase
PF00626 4 Gelsolin Gelsolin repeat
PF00627 7 UBA UBA/TS-N domain
PF00628 11 PHD PHD-finger
PF00631 1 G-gamma GGL domain
PF00632 6 HECT HECT-domain (ubiquitin-transferase)
PF00633 1 HHH Helix-hairpin-helix motif
PF00635 1 Motile_Sperm MSP (Major sperm protein) domain
PF00636 5 Ribonuclease_3 Ribonuclease III domain
PF00637 9 Clathrin Region in Clathrin and VPS
PF00638 3 Ran_BP1 RanBP1 domain
PF00639 2 Rotamase PPIC-type PPIASE domain
PF00641 2 zf-RanBP Zn-finger in Ran binding protein and others
PF00642 10 zf-CCCH Zinc finger C-x8-C-x5-C-x3-H type (and similar)
PF00644 2 PARP Poly(ADP-ribose) polymerase catalytic domain
PF00645 1 zf-PARP Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
PF00646 18 F-box F-box domain
PF00647 1 EF1G Elongation factor 1 gamma, conserved domain
PF00648 3 Peptidase_C2 Calpain family cysteine protease
PF00649 2 Copper-fist Copper fist DNA binding domain
PF00650 5 CRAL_TRIO CRAL/TRIO domain
PF00651 9 BTB BTB/POZ domain
PF00652 1 Ricin_B_lectin Ricin-type beta-trefoil lectin domain
PF00653 2 BIR Inhibitor of Apoptosis domain
PF00654 3 Voltage_CLC Voltage gated chloride channel
PF00656 2 Peptidase_C14 Caspase domain
PF00657 4 Lipase_GDSL GDSL-like Lipase/Acylhydrolase
PF00658 1 PABP Poly-adenylate binding protein, unique domain
PF00659 1 POLO_box POLO box duplicated region
PF00664 32 ABC_membrane ABC transporter transmembrane region
PF00665 2 rve Integrase core domain
PF00667 5 FAD_binding_1 FAD binding domain
PF00668 22 Condensation Condensation domain
PF00670 1 AdoHcyase_NAD S-adenosyl-L-homocysteine hydrolase, NAD binding domain
PF00672 5 HAMP HAMP domain
PF00673 2 Ribosomal_L5_C ribosomal L5P family C-terminus
PF00675 6 Peptidase_M16 Insulinase (Peptidase family M16)
PF00676 3 E1_dh Dehydrogenase E1 component
PF00677 2 Lum_binding Lumazine binding domain
PF00679 6 EFG_C Elongation factor G C-terminus
PF00682 5 HMGL-like HMGL-like
PF00684 4 DnaJ_CXXCXGXG DnaJ central domain
PF00686 1 CBM_20 Starch binding domain
PF00687 3 Ribosomal_L1 Ribosomal protein L1p/L10e family
PF00689 9 Cation_ATPase_C Cation transporting ATPase, C-terminus
PF00690 8 Cation_ATPase_N Cation transporter/ATPase, N-terminus
PF00692 1 dUTPase dUTPase
PF00694 4 Aconitase_C Aconitase C-terminal domain
PF00696 3 AA_kinase Amino acid kinase family
PF00697 1 PRAI N-(5'phosphoribosyl)anthranilate (PRA) isomerase
PF00698 18 Acyl_transf_1 Acyl transferase domain
PF00699 1 Urease_beta Urease beta subunit
PF00701 1 DHDPS Dihydrodipicolinate synthetase family
PF00702 25 Hydrolase haloacid dehalogenase-like hydrolase
PF00703 4 Glyco_hydro_2 Glycosyl hydrolases family 2
PF00704 13 Glyco_hydro_18 Glycosyl hydrolases family 18
PF00705 1 PCNA_N Proliferating cell nuclear antigen, N-terminal domain
PF00707 1 IF3_C Translation initiation factor IF-3, C-terminal domain
PF00709 1 Adenylsucc_synt Adenylosuccinate synthetase
PF00710 2 Asparaginase Asparaginase, N-terminal
PF00717 1 Peptidase_S24 Peptidase S24-like
PF00719 1 Pyrophosphatase Inorganic pyrophosphatase
PF00722 14 Glyco_hydro_16 Glycosyl hydrolases family 16
PF00723 1 Glyco_hydro_15 Glycosyl hydrolases family 15
PF00724 2 Oxidored_FMN NADH:flavin oxidoreductase / NADH oxidase family
PF00725 3 3HCDH 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
PF00728 2 Glyco_hydro_20 Glycosyl hydrolase family 20, catalytic domain
PF00730 4 HhH-GPD HhH-GPD superfamily base excision DNA repair protein
PF00731 1 AIRC AIR carboxylase
PF00732 12 GMC_oxred_N GMC oxidoreductase
PF00733 5 Asn_synthase Asparagine synthase
PF00735 7 Septin Septin
PF00736 1 EF1_GNE EF-1 guanine nucleotide exchange domain
PF00742 1 Homoserine_dh Homoserine dehydrogenase
PF00743 12 FMO-like Flavin-binding monooxygenase-like
PF00749 3 tRNA-synt_1c tRNA synthetases class I (E and Q), catalytic domain
PF00750 1 tRNA-synt_1d tRNA synthetases class I (R)
PF00752 4 XPG_N XPG N-terminal domain
PF00753 7 Lactamase_B Metallo-beta-lactamase superfamily
PF00755 2 Carn_acyltransf Choline/Carnitine o-acyltransferase
PF00756 1 Esterase Putative esterase
PF00762 1 Ferrochelatase Ferrochelatase
PF00763 2 THF_DHG_CYH Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
PF00764 2 Arginosuc_synth Arginosuccinate synthase
PF00766 1 ETF_alpha Electron transfer flavoprotein FAD-binding domain
PF00773 3 RNB RNB domain
PF00775 3 Dioxygenase_C Dioxygenase
PF00780 3 CNH CNH domain
PF00781 2 DAGK_cat Diacylglycerol kinase catalytic domain
PF00782 5 DSPc Dual specificity phosphatase, catalytic domain
PF00786 2 PBD P21-Rho-binding domain
PF00787 14 PX PX domain
PF00788 2 RA Ras association (RalGDS/AF-6) domain
PF00789 5 UBX UBX domain
PF00790 4 VHS VHS domain
PF00792 1 PI3K_C2 Phosphoinositide 3-kinase C2
PF00793 2 DAHP_synth_1 DAHP synthetase I family
PF00795 5 CN_hydrolase Carbon-nitrogen hydrolase
PF00797 1 Acetyltransf_2 N-acetyltransferase
PF00800 1 PDT Prephenate dehydratase
PF00804 2 Syntaxin Syntaxin
PF00805 1 Pentapeptide Pentapeptide repeats (8 copies)
PF00806 19 PUF Pumilio-family RNA binding repeat
PF00808 10 CBFD_NFYB_HMF Histone-like transcription factor (CBF/NF-Y) and archaeal histone
PF00809 1 Pterin_bind Pterin binding enzyme
PF00810 2 ER_lumen_recept ER lumen protein retaining receptor
PF00814 2 Peptidase_M22 Glycoprotease family
PF00815 1 Histidinol_dh Histidinol dehydrogenase
PF00817 4 IMS impB/mucB/samB family
PF00827 1 Ribosomal_L15e Ribosomal L15
PF00828 2 Ribosomal_L27A Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
PF00829 1 Ribosomal_L21p Ribosomal prokaryotic L21 protein
PF00830 1 Ribosomal_L28 Ribosomal L28 family
PF00831 1 Ribosomal_L29 Ribosomal L29 protein
PF00833 1 Ribosomal_S17e Ribosomal S17
PF00834 1 Ribul_P_3_epim Ribulose-phosphate 3 epimerase family
PF00838 1 TCTP Translationally controlled tumour protein
PF00849 1 PseudoU_synth_2 RNA pseudouridylate synthase
PF00850 4 Hist_deacetyl Histone deacetylase domain
PF00854 3 PTR2 POT family
PF00855 1 PWWP PWWP domain
PF00856 13 SET SET domain
PF00857 4 Isochorismatase Isochorismatase family
PF00860 3 Xan_ur_permease Permease family
PF00867 4 XPG_I XPG I-region
PF00875 3 DNA_photolyase DNA photolyase
PF00878 1 CIMR Cation-independent mannose-6-phosphate receptor repeat
PF00881 2 Nitroreductase Nitroreductase family
PF00884 7 Sulfatase Sulfatase
PF00885 1 DMRL_synthase 6,7-dimethyl-8-ribityllumazine synthase
PF00886 1 Ribosomal_S16 Ribosomal protein S16
PF00887 2 ACBP Acyl CoA binding protein
PF00888 4 Cullin Cullin family
PF00890 15 FAD_binding_2 FAD binding domain
PF00891 15 Methyltransf_2 O-methyltransferase domain
PF00892 3 EamA EamA-like transporter family
PF00899 9 ThiF ThiF family
PF00900 1 Ribosomal_S4e Ribosomal family S4e
PF00903 5 Glyoxalase Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PF00909 1 Ammonium_transp Ammonium Transporter Family
PF00916 5 Sulfate_transp Sulfate permease family
PF00917 1 MATH MATH domain
PF00920 2 ILVD_EDD Dehydratase family
PF00923 3 TAL_FSA Transaldolase/Fructose-6-phosphate aldolase
PF00924 2 MS_channel Mechanosensitive ion channel
PF00925 1 GTP_cyclohydro2 GTP cyclohydrolase II
PF00926 1 DHBP_synthase 3,4-dihydroxy-2-butanone 4-phosphate synthase
PF00928 4 Adap_comp_sub Adaptor complexes medium subunit family
PF00929 6 RNase_T Exonuclease
PF00930 2 DPPIV_N Dipeptidyl peptidase IV (DPP IV) N-terminal region
PF00933 8 Glyco_hydro_3 Glycosyl hydrolase family 3 N terminal domain
PF00935 1 Ribosomal_L44 Ribosomal protein L44
PF00939 1 Na_sulph_symp Sodium:sulfate symporter transmembrane region
PF00940 1 RNA_pol DNA-dependent RNA polymerase
PF00941 1 FAD_binding_5 FAD binding domain in molybdopterin dehydrogenase
PF00953 1 Glycos_transf_4 Glycosyl transferase family 4
PF00955 4 HCO3_cotransp HCO3- transporter family
PF00956 2 NAP Nucleosome assembly protein (NAP)
PF00957 4 Synaptobrevin Synaptobrevin
PF00958 1 GMP_synt_C GMP synthase C terminal domain
PF00959 2 Phage_lysozyme Phage lysozyme
PF00962 3 A_deaminase Adenosine/AMP deaminase
PF00970 6 FAD_binding_6 Oxidoreductase FAD-binding domain
PF00975 7 Thioesterase Thioesterase domain
PF00977 2 His_biosynth Histidine biosynthesis protein
PF00982 3 Glyco_transf_20 Glycosyltransferase family 20
PF00984 2 UDPG_MGDP_dh UDP-glucose/GDP-mannose dehydrogenase family, central domain
PF00988 2 CPSase_sm_chain Carbamoyl-phosphate synthase small chain, CPSase domain
PF00989 2 PAS PAS fold
PF00994 3 MoCF_biosynth Probable molybdopterin binding domain
PF00995 5 Sec1 Sec1 family
PF00996 3 GDI GDP dissociation inhibitor
PF00999 5 Na_H_Exchanger Sodium/hydrogen exchanger family
PF01000 2 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
PF01008 4 IF-2B Initiation factor 2 subunit family
PF01012 2 ETF Electron transfer flavoprotein domain
PF01014 2 Uricase Uricase
PF01015 1 Ribosomal_S3Ae Ribosomal S3Ae family
PF01016 1 Ribosomal_L27 Ribosomal L27 protein
PF01018 2 GTP1_OBG GTP1/OBG
PF01019 3 G_glu_transpept Gamma-glutamyltranspeptidase
PF01020 1 Ribosomal_L40e Ribosomal L40e family
PF01025 1 GrpE GrpE
PF01026 2 TatD_DNase TatD related DNase
PF01027 2 Bax1-I Inhibitor of apoptosis-promoting Bax1
PF01028 1 Topoisom_I Eukaryotic DNA topoisomerase I, catalytic core
PF01031 7 Dynamin_M Dynamin central region
PF01035 1 DNA_binding_1 6-O-methylguanine DNA methyltransferase, DNA binding domain
PF01039 3 Carboxyl_trans Carboxyl transferase domain
PF01040 3 UbiA UbiA prenyltransferase family
PF01041 4 DegT_DnrJ_EryC1 DegT/DnrJ/EryC1/StrS aminotransferase family
PF01042 2 Ribonuc_L-PSP Endoribonuclease L-PSP
PF01048 2 PNP_UDP_1 Phosphorylase superfamily
PF01053 7 Cys_Met_Meta_PP Cys/Met metabolism PLP-dependent enzyme
PF01055 3 Glyco_hydro_31 Glycosyl hydrolases family 31
PF01058 1 Oxidored_q6 NADH ubiquinone oxidoreductase, 20 Kd subunit
PF01061 13 ABC2_membrane ABC-2 type transporter
PF01062 1 Bestrophin Bestrophin, RFP-TM, chloride channel
PF01063 6 Aminotran_4 Amino-transferase class IV
PF01066 5 CDP-OH_P_transf CDP-alcohol phosphatidyltransferase
PF01067 1 Calpain_III Calpain large subunit, domain III
PF01068 5 DNA_ligase_A_M ATP dependent DNA ligase domain
PF01070 6 FMN_dh FMN-dependent dehydrogenase
PF01071 1 GARS_A Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
PF01073 11 3Beta_HSD 3-beta hydroxysteroid dehydrogenase/isomerase family
PF01074 1 Glyco_hydro_38N Glycosyl hydrolases family 38 N-terminal domain
PF01077 3 NIR_SIR Nitrite and sulphite reductase 4Fe-4S domain
PF01078 5 Mg_chelatase Magnesium chelatase, subunit ChlI
PF01083 1 Cutinase Cutinase
PF01084 1 Ribosomal_S18 Ribosomal protein S18
PF01086 1 Clathrin_lg_ch Clathrin light chain
PF01087 1 GalP_UDP_transf Galactose-1-phosphate uridyl transferase, N-terminal domain
PF01088 3 Peptidase_C12 Ubiquitin carboxyl-terminal hydrolase, family 1
PF01090 1 Ribosomal_S19e Ribosomal protein S19e
PF01092 1 Ribosomal_S6e Ribosomal protein S6e
PF01096 3 TFIIS_C Transcription factor S-II (TFIIS)
PF01103 1 Bac_surface_Ag Surface antigen
PF01105 4 EMP24_GP25L emp24/gp25L/p24 family/GOLD
PF01106 1 NifU NifU-like domain
PF01112 2 Asparaginase_2 Asparaginase
PF01115 1 F_actin_cap_B F-actin capping protein, beta subunit
PF01116 1 F_bP_aldolase Fructose-bisphosphate aldolase class-II
PF01118 2 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain
PF01119 3 DNA_mis_repair DNA mismatch repair protein, C-terminal domain
PF01121 1 CoaE Dephospho-CoA kinase
PF01124 1 MAPEG MAPEG family
PF01125 1 G10 G10 protein
PF01126 1 Heme_oxygenase Heme oxygenase
PF01127 1 Sdh_cyt Succinate dehydrogenase/Fumarate reductase transmembrane subunit
PF01131 1 Topoisom_bac DNA topoisomerase
PF01134 3 GIDA Glucose inhibited division protein A
PF01135 6 PCMT Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
PF01137 1 RTC RNA 3'-terminal phosphate cyclase
PF01138 5 RNase_PH 3' exoribonuclease family, domain 1
PF01142 1 TruD tRNA pseudouridine synthase D (TruD)
PF01144 4 CoA_trans Coenzyme A transferase
PF01145 4 Band_7 SPFH domain / Band 7 family
PF01148 1 CTP_transf_1 Cytidylyltransferase family
PF01150 2 GDA1_CD39 GDA1/CD39 (nucleoside phosphatase) family
PF01151 3 ELO GNS1/SUR4 family
PF01154 1 HMG_CoA_synt_N Hydroxymethylglutaryl-coenzyme A synthase N terminal
PF01156 2 IU_nuc_hydro Inosine-uridine preferring nucleoside hydrolase
PF01157 1 Ribosomal_L21e Ribosomal protein L21e
PF01158 1 Ribosomal_L36e Ribosomal protein L36e
PF01159 1 Ribosomal_L6e Ribosomal protein L6e
PF01161 1 PBP Phosphatidylethanolamine-binding protein
PF01163 2 RIO1 RIO1 family
PF01165 1 Ribosomal_S21 Ribosomal protein S21
PF01168 2 Ala_racemase_N Alanine racemase, N-terminal domain
PF01169 2 UPF0016 Uncharacterized protein family UPF0016
PF01170 1 UPF0020 Putative RNA methylase family UPF0020
PF01171 2 ATP_bind_3 PP-loop family
PF01172 2 SBDS Shwachman-Bodian-Diamond syndrome (SBDS) protein
PF01174 2 SNO SNO glutamine amidotransferase family
PF01176 2 eIF-1a Translation initiation factor 1A / IF-1
PF01179 2 Cu_amine_oxid Copper amine oxidase, enzyme domain
PF01182 2 Glucosamine_iso Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
PF01184 2 Gpr1_Fun34_YaaH GPR1/FUN34/yaaH family
PF01189 3 Methyltr_RsmB-F 16S rRNA methyltransferase RsmB/F
PF01191 1 RNA_pol_Rpb5_C RNA polymerase Rpb5, C-terminal domain
PF01192 1 RNA_pol_Rpb6 RNA polymerase Rpb6
PF01193 4 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
PF01194 1 RNA_pol_N RNA polymerases N / 8 kDa subunit
PF01195 1 Pept_tRNA_hydro Peptidyl-tRNA hydrolase
PF01196 1 Ribosomal_L17 Ribosomal protein L17
PF01198 1 Ribosomal_L31e Ribosomal protein L31e
PF01199 1 Ribosomal_L34e Ribosomal protein L34e
PF01200 1 Ribosomal_S28e Ribosomal protein S28e
PF01201 2 Ribosomal_S8e Ribosomal protein S8e
PF01202 2 SKI Shikimate kinase
PF01204 3 Trehalase Trehalase
PF01205 2 UPF0029 Uncharacterized protein family UPF0029
PF01207 5 Dus Dihydrouridine synthase (Dus)
PF01208 1 URO-D Uroporphyrinogen decarboxylase (URO-D)
PF01209 13 Ubie_methyltran ubiE/COQ5 methyltransferase family
PF01210 2 NAD_Gly3P_dh_N NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
PF01212 6 Beta_elim_lyase Beta-eliminating lyase
PF01213 1 CAP_N Adenylate cyclase associated (CAP) N terminal
PF01214 2 CK_II_beta Casein kinase II regulatory subunit
PF01215 1 COX5B Cytochrome c oxidase subunit Vb
PF01216 1 Calsequestrin Calsequestrin
PF01217 7 Clat_adaptor_s Clathrin adaptor complex small chain
PF01218 1 Coprogen_oxidas Coproporphyrinogen III oxidase
PF01222 2 ERG4_ERG24 Ergosterol biosynthesis ERG4/ERG24 family
PF01223 1 Endonuclease_NS DNA/RNA non-specific endonuclease
PF01227 1 GTP_cyclohydroI GTP cyclohydrolase I
PF01230 4 HIT HIT domain
PF01231 2 IDO Indoleamine 2,3-dioxygenase
PF01232 1 Mannitol_dh Mannitol dehydrogenase Rossmann domain
PF01233 2 NMT Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain
PF01237 5 Oxysterol_BP Oxysterol-binding protein
PF01238 1 PMI_typeI Phosphomannose isomerase type I
PF01239 9 PPTA Protein prenyltransferase alpha subunit repeat
PF01243 4 Putative_PNPOx Pyridoxamine 5'-phosphate oxidase
PF01244 1 Peptidase_M19 Membrane dipeptidase (Peptidase family M19)
PF01245 1 Ribosomal_L19 Ribosomal protein L19
PF01246 2 Ribosomal_L24e Ribosomal protein L24e
PF01247 1 Ribosomal_L35Ae Ribosomal protein L35Ae
PF01248 5 Ribosomal_L7Ae Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
PF01249 1 Ribosomal_S21e Ribosomal protein S21e
PF01250 1 Ribosomal_S6 Ribosomal protein S6
PF01251 1 Ribosomal_S7e Ribosomal protein S7e
PF01253 2 SUI1 Translation initiation factor SUI1
PF01255 2 Prenyltransf Putative undecaprenyl diphosphate synthase
PF01256 2 Carb_kinase Carbohydrate kinase
PF01257 1 2Fe-2S_thioredx Thioredoxin-like [2Fe-2S] ferredoxin
PF01259 1 SAICAR_synt SAICAR synthetase
PF01261 1 AP_endonuc_2 Xylose isomerase-like TIM barrel
PF01262 2 AlaDh_PNT_C Alanine dehydrogenase/PNT, C-terminal domain
PF01263 3 Aldose_epim Aldose 1-epimerase
PF01264 1 Chorismate_synt Chorismate synthase
PF01265 2 Cyto_heme_lyase Cytochrome c/c1 heme lyase
PF01266 17 DAO FAD dependent oxidoreductase
PF01267 1 F-actin_cap_A F-actin capping protein alpha subunit
PF01269 1 Fibrillarin Fibrillarin
PF01274 1 Malate_synthase Malate synthase
PF01280 1 Ribosomal_L19e Ribosomal protein L19e
PF01282 1 Ribosomal_S24e Ribosomal protein S24e
PF01283 1 Ribosomal_S26e Ribosomal protein S26e
PF01284 5 MARVEL Membrane-associating domain
PF01285 1 TEA TEA/ATTS domain
PF01287 2 eIF-5a Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold
PF01288 1 HPPK 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
PF01293 1 PEPCK_ATP Phosphoenolpyruvate carboxykinase
PF01294 1 Ribosomal_L13e Ribosomal protein L13e
PF01300 1 Sua5_yciO_yrdC Telomere recombination
PF01301 1 Glyco_hydro_35 Glycosyl hydrolases family 35
PF01302 4 CAP_GLY CAP-Gly domain
PF01315 1 Ald_Xan_dh_C Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
PF01321 1 Creatinase_N Creatinase/Prolidase N-terminal domain
PF01323 3 DSBA DSBA-like thioredoxin domain
PF01328 1 Peroxidase_2 Peroxidase, family 2
PF01329 1 Pterin_4a Pterin 4 alpha carbinolamine dehydratase
PF01331 1 mRNA_cap_enzyme mRNA capping enzyme, catalytic domain
PF01336 6 tRNA_anti-codon OB-fold nucleic acid binding domain
PF01344 7 Kelch_1 Kelch motif
PF01351 1 RNase_HII Ribonuclease HII
PF01363 6 FYVE FYVE zinc finger
PF01368 1 DHH DHH family
PF01369 4 Sec7 Sec7 domain
PF01370 29 Epimerase NAD dependent epimerase/dehydratase family
PF01375 20 Enterotoxin_a Heat-labile enterotoxin alpha chain
PF01379 1 Porphobil_deam Porphobilinogen deaminase, dipyromethane cofactor binding domain
PF01380 3 SIS SIS domain
PF01381 1 HTH_3 Helix-turn-helix
PF01384 2 PHO4 Phosphate transporter family
PF01388 4 ARID ARID/BRIGHT DNA binding domain
PF01391 1 Collagen Collagen triple helix repeat (20 copies)
PF01393 1 Chromo_shadow Chromo shadow domain
PF01394 1 Clathrin_propel Clathrin propeller repeat
PF01398 7 JAB JAB1/Mov34/MPN/PAD-1 ubiquitin protease
PF01399 14 PCI PCI domain
PF01406 2 tRNA-synt_1e tRNA synthetases class I (C) catalytic domain
PF01408 6 GFO_IDH_MocA Oxidoreductase family, NAD-binding Rossmann fold
PF01409 3 tRNA-synt_2d tRNA synthetases class II core domain (F)
PF01411 1 tRNA-synt_2c tRNA synthetases class II (A)
PF01412 5 ArfGap Putative GTPase activating protein for Arf
PF01416 2 PseudoU_synth_1 tRNA pseudouridine synthase
PF01417 3 ENTH ENTH domain
PF01419 1 Jacalin Jacalin-like lectin domain
PF01423 15 LSM LSM domain
PF01424 4 R3H R3H domain
PF01425 13 Amidase Amidase
PF01426 2 BAH BAH domain
PF01428 3 zf-AN1 AN1-like Zinc finger
PF01431 1 Peptidase_M13 Peptidase family M13
PF01432 2 Peptidase_M3 Peptidase family M3
PF01433 3 Peptidase_M1 Peptidase family M1 domain
PF01434 2 Peptidase_M41 Peptidase family M41
PF01435 2 Peptidase_M48 Peptidase family M48
PF01443 1 Viral_helicase1 Viral (Superfamily 1) RNA helicase
PF01447 1 Peptidase_M4 Thermolysin metallopeptidase, catalytic domain
PF01450 1 IlvC Acetohydroxy acid isomeroreductase, catalytic domain
PF01451 1 LMWPc Low molecular weight phosphotyrosine protein phosphatase
PF01454 1 MAGE MAGE family
PF01459 2 Porin_3 Eukaryotic porin
PF01465 1 GRIP GRIP domain
PF01466 1 Skp1 Skp1 family, dimerisation domain
PF01467 3 CTP_transf_like Cytidylyltransferase-like
PF01470 1 Peptidase_C15 Pyroglutamyl peptidase
PF01472 2 PUA PUA domain
PF01474 1 DAHP_synth_2 Class-II DAHP synthetase family
PF01476 6 LysM LysM domain
PF01479 4 S4 S4 domain
PF01480 3 PWI PWI domain
PF01483 1 P_proprotein Proprotein convertase P-domain
PF01485 9 IBR IBR domain, a half RING-finger domain
PF01487 1 DHquinase_I Type I 3-dehydroquinase
PF01490 10 Aa_trans Transmembrane amino acid transporter protein
PF01491 1 Frataxin_Cyay Frataxin-like domain
PF01493 1 GXGXG GXGXG motif
PF01494 24 FAD_binding_3 FAD binding domain
PF01496 1 V_ATPase_I V-type ATPase 116kDa subunit family
PF01498 2 HTH_Tnp_Tc3_2 Transposase
PF01501 2 Glyco_transf_8 Glycosyl transferase family 8
PF01502 1 PRA-CH Phosphoribosyl-AMP cyclohydrolase
PF01503 1 PRA-PH Phosphoribosyl-ATP pyrophosphohydrolase
PF01504 3 PIP5K Phosphatidylinositol-4-phosphate 5-Kinase
PF01507 2 PAPS_reduct Phosphoadenosine phosphosulfate reductase family
PF01509 2 TruB_N TruB family pseudouridylate synthase (N terminal domain)
PF01512 1 Complex1_51K Respiratory-chain NADH dehydrogenase 51 Kd subunit
PF01513 3 NAD_kinase ATP-NAD kinase
PF01521 1 Fe-S_biosyn Iron-sulphur cluster biosynthesis
PF01522 3 Polysacc_deac_1 Polysaccharide deacetylase
PF01529 6 DHHC DHHC palmitoyltransferase
PF01532 9 Glyco_hydro_47 Glycosyl hydrolase family 47
PF01535 10 PPR PPR repeat
PF01536 1 SAM_decarbox Adenosylmethionine decarboxylase
PF01541 1 GIY-YIG GIY-YIG catalytic domain
PF01544 7 CorA CorA-like Mg2+ transporter protein
PF01545 7 Cation_efflux Cation efflux family
PF01546 7 Peptidase_M20 Peptidase family M20/M25/M40
PF01553 6 Acyltransferase Acyltransferase
PF01554 4 MatE MatE
PF01556 5 DnaJ_C DnaJ C terminal domain
PF01557 4 FAA_hydrolase Fumarylacetoacetate (FAA) hydrolase family
PF01564 2 Spermine_synth Spermine/spermidine synthase domain
PF01565 17 FAD_binding_4 FAD binding domain
PF01569 6 PAP2 PAP2 superfamily
PF01571 1 GCV_T Aminomethyltransferase folate-binding domain
PF01575 3 MaoC_dehydratas MaoC like domain
PF01576 1 Myosin_tail_1 Myosin tail
PF01583 2 APS_kinase Adenylylsulphate kinase
PF01585 8 G-patch G-patch domain
PF01588 1 tRNA_bind Putative tRNA binding domain
PF01590 3 GAF GAF domain
PF01591 4 6PF2K 6-phosphofructo-2-kinase
PF01592 1 NifU_N NifU-like N terminal domain
PF01593 15 Amino_oxidase Flavin containing amine oxidoreductase
PF01595 1 DUF21 Cyclin M transmembrane N-terminal domain
PF01596 3 Methyltransf_3 O-methyltransferase
PF01597 1 GCV_H Glycine cleavage H-protein
PF01599 1 Ribosomal_S27 Ribosomal protein S27a
PF01602 8 Adaptin_N Adaptin N terminal region
PF01603 1 B56 Protein phosphatase 2A regulatory B subunit (B56 family)
PF01608 1 I_LWEQ I/LWEQ domain
PF01612 3 DNA_pol_A_exo1 3'-5' exonuclease
PF01613 2 Flavin_Reduct Flavin reductase like domain
PF01619 1 Pro_dh Proline dehydrogenase
PF01624 4 MutS_I MutS domain I
PF01625 1 PMSR Peptide methionine sulfoxide reductase
PF01627 1 Hpt Hpt domain
PF01633 2 Choline_kinase Choline/ethanolamine kinase
PF01634 1 HisG ATP phosphoribosyltransferase
PF01636 8 APH Phosphotransferase enzyme family
PF01641 1 SelR SelR domain
PF01644 3 Chitin_synth_1 Chitin synthase
PF01645 3 Glu_synthase Conserved region in glutamate synthase
PF01648 2 ACPS 4'-phosphopantetheinyl transferase superfamily
PF01650 1 Peptidase_C13 Peptidase C13 family
PF01652 2 IF4E Eukaryotic initiation factor 4E
PF01655 1 Ribosomal_L32e Ribosomal protein L32
PF01656 3 CbiA CobQ/CobB/MinD/ParA nucleotide binding domain
PF01658 1 Inos-1-P_synth Myo-inositol-1-phosphate synthase
PF01661 1 Macro Macro domain
PF01663 7 Phosphodiest Type I phosphodiesterase / nucleotide pyrophosphatase
PF01667 1 Ribosomal_S27e Ribosomal protein S27
PF01670 1 Glyco_hydro_12 Glycosyl hydrolase family 12
PF01674 1 Lipase_2 Lipase (class 2)
PF01676 1 Metalloenzyme Metalloenzyme superfamily
PF01679 2 Pmp3 Proteolipid membrane potential modulator
PF01680 1 SOR_SNZ SOR/SNZ family
PF01687 1 Flavokinase Riboflavin kinase
PF01693 2 Cauli_VI Caulimovirus viroplasmin
PF01694 3 Rhomboid Rhomboid family
PF01695 1 IstB_IS21 IstB-like ATP binding protein
PF01699 11 Na_Ca_ex Sodium/calcium exchanger protein
PF01702 2 TGT Queuine tRNA-ribosyltransferase
PF01704 2 UDPGP UTP--glucose-1-phosphate uridylyltransferase
PF01709 1 Transcrip_reg Transcriptional regulator
PF01713 2 Smr Smr domain
PF01715 1 IPPT IPP transferase
PF01717 2 Meth_synt_2 Cobalamin-independent synthase, Catalytic domain
PF01722 2 BolA BolA-like protein
PF01725 1 Ham1p_like Ham1 family
PF01728 4 FtsJ FtsJ-like methyltransferase
PF01729 1 QRPTase_C Quinolinate phosphoribosyl transferase, C-terminal domain
PF01730 1 UreF UreF
PF01731 2 Arylesterase Arylesterase
PF01733 1 Nucleoside_tran Nucleoside transporter
PF01734 5 Patatin Patatin-like phospholipase
PF01735 2 PLA2_B Lysophospholipase catalytic domain
PF01738 8 DLH Dienelactone hydrolase family
PF01740 5 STAS STAS domain
PF01743 1 PolyA_pol Poly A polymerase head domain
PF01746 1 tRNA_m1G_MT tRNA (Guanine-1)-methyltransferase
PF01747 1 ATP-sulfurylase ATP-sulfurylase
PF01749 1 IBB Importin beta binding domain
PF01751 2 Toprim Toprim domain
PF01753 2 zf-MYND MYND finger
PF01755 1 Glyco_transf_25 Glycosyltransferase family 25 (LPS biosynthesis protein)
PF01757 2 Acyl_transf_3 Acyltransferase family
PF01758 1 SBF Sodium Bile acid symporter family
PF01761 2 DHQ_synthase 3-dehydroquinate synthase
PF01764 9 Lipase_3 Lipase (class 3)
PF01765 1 RRF Ribosome recycling factor
PF01773 1 Nucleos_tra2_N Na+ dependent nucleoside transporter N-terminus
PF01774 1 UreD UreD urease accessory protein
PF01775 1 Ribosomal_L18A Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A
PF01776 1 Ribosomal_L22e Ribosomal L22e protein family
PF01777 1 Ribosomal_L27e Ribosomal L27e protein family
PF01778 2 Ribosomal_L28e Ribosomal L28e protein family
PF01780 1 Ribosomal_L37ae Ribosomal L37ae protein family
PF01781 1 Ribosomal_L38e Ribosomal L38e protein family
PF01783 1 Ribosomal_L32p Ribosomal L32p protein family
PF01784 1 NIF3 NIF3 (NGG1p interacting factor 3)
PF01786 1 AOX Alternative oxidase
PF01793 6 Glyco_transf_15 Glycolipid 2-alpha-mannosyltransferase
PF01794 10 Ferric_reduct Ferric reductase like transmembrane component
PF01798 3 Nop snoRNA binding domain, fibrillarin
PF01799 1 Fer2_2 [2Fe-2S] binding domain
PF01803 1 LIM_bind LIM-domain binding protein
PF01805 3 Surp Surp module
PF01808 1 AICARFT_IMPCHas AICARFT/IMPCHase bienzyme
PF01812 1 5-FTHF_cyc-lig 5-formyltetrahydrofolate cyclo-ligase family
PF01813 1 ATP-synt_D ATP synthase subunit D
PF01822 14 WSC WSC domain
PF01833 1 TIG IPT/TIG domain
PF01841 3 Transglut_core Transglutaminase-like superfamily
PF01842 2 ACT ACT domain
PF01843 2 DIL DIL domain
PF01846 3 FF FF domain
PF01849 2 NAC NAC domain
PF01851 3 PC_rep Proteasome/cyclosome repeat
PF01853 3 MOZ_SAS MOZ/SAS family
PF01855 1 POR_N Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
PF01863 1 DUF45 Protein of unknown function DUF45
PF01866 2 Diphthamide_syn Putative diphthamide synthesis protein
PF01868 1 UPF0086 Domain of unknown function UPF0086
PF01871 1 AMMECR1 AMMECR1
PF01873 2 eIF-5_eIF-2B Domain found in IF2B/IF5
PF01875 1 Memo Memo-like protein
PF01876 1 RNase_P_p30 RNase P subunit p30
PF01878 1 EVE EVE domain
PF01883 1 FeS_assembly_P Iron-sulfur cluster assembly protein
PF01885 1 PTS_2-RNA RNA 2'-phosphotransferase, Tpt1 / KptA family
PF01894 1 UPF0047 Uncharacterised protein family UPF0047
PF01896 1 DNA_primase_S DNA primase small subunit
PF01900 1 RNase_P_Rpp14 Rpp14/Pop5 family
PF01902 1 Diphthami_syn_2 Diphthamide synthase
PF01907 1 Ribosomal_L37e Ribosomal protein L37e
PF01909 3 NTP_transf_2 Nucleotidyltransferase domain
PF01910 1 Thiamine_BP Thiamine-binding protein
PF01912 1 eIF-6 eIF-6 family
PF01915 5 Glyco_hydro_3_C Glycosyl hydrolase family 3 C-terminal domain
PF01916 1 DS Deoxyhypusine synthase
PF01918 1 Alba Alba
PF01920 4 Prefoldin_2 Prefoldin subunit
PF01922 1 SRP19 SRP19 protein
PF01926 34 MMR_HSR1 50S ribosome-binding GTPase
PF01929 1 Ribosomal_L14e Ribosomal protein L14
PF01930 1 Cas_Cas4 Domain of unknown function DUF83
PF01931 1 NTPase_I-T Protein of unknown function DUF84
PF01933 1 UPF0052 Uncharacterised protein family UPF0052
PF01937 3 DUF89 Protein of unknown function DUF89
PF01940 1 DUF92 Integral membrane protein DUF92
PF01946 1 Thi4 Thi4 family
PF01956 1 EMC3_TMCO1 Integral membrane protein EMC3/TMCO1-like
PF01960 1 ArgJ ArgJ family
PF01965 5 DJ-1_PfpI DJ-1/PfpI family
PF01966 2 HD HD domain
PF01967 1 MoaC MoaC family
PF01968 2 Hydantoinase_A Hydantoinase/oxoprolinase
PF01974 2 tRNA_int_endo tRNA intron endonuclease, catalytic C-terminal domain
PF01975 2 SurE Survival protein SurE
PF01979 11 Amidohydro_1 Amidohydrolase family
PF01981 1 PTH2 Peptidyl-tRNA hydrolase PTH2
PF01984 1 dsDNA_bind Double-stranded DNA-binding domain
PF01987 2 AIM24 Mitochondrial biogenesis AIM24
PF01988 2 VIT1 VIT family
PF01990 1 ATP-synt_F ATP synthase (F/14-kDa) subunit
PF01991 1 vATP-synt_E ATP synthase (E/31 kDa) subunit
PF01992 1 vATP-synt_AC39 ATP synthase (C/AC39) subunit
PF01997 2 Translin Translin family
PF02002 1 TFIIE_alpha TFIIE alpha subunit
PF02005 2 TRM N2,N2-dimethylguanosine tRNA methyltransferase
PF02020 2 W2 eIF4-gamma/eIF5/eIF2-epsilon
PF02036 1 SCP2 SCP-2 sterol transfer family
PF02037 2 SAP SAP domain
PF02045 1 CBFB_NFYA CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B
PF02046 1 COX6A Cytochrome c oxidase subunit VIa
PF02064 1 MAS20 MAS20 protein import receptor
PF02065 1 Melibiase Melibiase
PF02076 1 STE3 Pheromone A receptor
PF02077 1 SURF4 SURF4 family
PF02089 1 Palm_thioest Palmitoyl protein thioesterase
PF02100 1 ODC_AZ Ornithine decarboxylase antizyme
PF02102 3 Peptidase_M35 Deuterolysin metalloprotease (M35) family
PF02104 1 SURF1 SURF1 family
PF02109 1 DAD DAD family
PF02110 1 HK Hydroxyethylthiazole kinase family
PF02112 1 PDEase_II cAMP phosphodiesterases class-II
PF02114 2 Phosducin Phosducin
PF02115 1 Rho_GDI RHO protein GDP dissociation inhibitor
PF02116 1 STE2 Fungal pheromone mating factor STE2 GPCR
PF02127 2 Peptidase_M18 Aminopeptidase I zinc metalloprotease (M18)
PF02129 1 Peptidase_S15 X-Pro dipeptidyl-peptidase (S15 family)
PF02133 4 Transp_cyt_pur Permease for cytosine/purines, uracil, thiamine, allantoin
PF02136 3 NTF2 Nuclear transport factor 2 (NTF2) domain
PF02137 1 A_deamin Adenosine-deaminase (editase) domain
PF02138 1 Beach Beige/BEACH domain
PF02141 2 DENN DENN (AEX-3) domain
PF02142 2 MGS MGS-like domain
PF02144 2 Rad1 Repair protein Rad1/Rec1/Rad17
PF02145 1 Rap_GAP Rap/ran-GAP
PF02146 8 SIR2 Sir2 family
PF02148 3 zf-UBP Zn-finger in ubiquitin-hydrolases and other protein
PF02149 1 KA1 Kinase associated domain 1
PF02150 2 RNA_POL_M_15KD RNA polymerases M/15 Kd subunit
PF02152 1 FolB Dihydroneopterin aldolase
PF02153 1 PDH Prephenate dehydrogenase
PF02157 1 Man-6-P_recep Mannose-6-phosphate receptor
PF02167 1 Cytochrom_C1 Cytochrome C1 family
PF02170 1 PAZ PAZ domain
PF02171 2 Piwi Piwi domain
PF02176 1 zf-TRAF TRAF-type zinc finger
PF02178 5 AT_hook AT hook motif
PF02179 1 BAG BAG domain
PF02181 1 FH2 Formin Homology 2 Domain
PF02184 2 HAT HAT (Half-A-TPR) repeat
PF02185 3 HR1 Hr1 repeat
PF02186 1 TFIIE_beta TFIIE beta subunit core domain
PF02187 1 GAS2 Growth-Arrest-Specific Protein 2 Domain
PF02190 3 LON_substr_bdg ATP-dependent protease La (LON) substrate-binding domain
PF02194 2 PXA PXA domain
PF02200 1 STE STE like transcription factor
PF02201 2 SWIB SWIB/MDM2 domain
PF02204 3 VPS9 Vacuolar sorting protein 9 (VPS9) domain
PF02205 2 WH2 WH2 motif
PF02207 2 zf-UBR Putative zinc finger in N-recognin (UBR box)
PF02212 2 GED Dynamin GTPase effector domain
PF02213 2 GYF GYF domain
PF02214 2 BTB_2 BTB/POZ domain
PF02219 3 MTHFR Methylenetetrahydrofolate reductase
PF02221 1 E1_DerP2_DerF2 ML domain
PF02222 7 ATP-grasp ATP-grasp domain
PF02223 1 Thymidylate_kin Thymidylate kinase
PF02224 1 Cytidylate_kin Cytidylate kinase
PF02225 4 PA PA domain
PF02229 1 PC4 Transcriptional Coactivator p15 (PC4)
PF02230 3 Abhydrolase_2 Phospholipase/Carboxylesterase
PF02233 1 PNTB NAD(P) transhydrogenase beta subunit
PF02238 1 COX7a Cytochrome c oxidase subunit VII
PF02239 1 Cytochrom_D1 Cytochrome D1 heme domain
PF02244 1 Propep_M14 Carboxypeptidase activation peptide
PF02257 1 RFX_DNA_binding RFX DNA-binding domain
PF02259 3 FAT FAT domain
PF02260 4 FATC FATC domain
PF02263 1 GBP Guanylate-binding protein, N-terminal domain
PF02265 1 S1-P1_nuclease S1/P1 Nuclease
PF02268 1 TFIIA_gamma_N Transcription initiation factor IIA, gamma subunit, helical domain
PF02269 2 TFIID-18kDa Transcription initiation factor IID, 18kD subunit
PF02270 1 TFIIF_beta TFIIF, beta subunit HTH domain
PF02271 1 UCR_14kD Ubiquinol-cytochrome C reductase complex 14kD subunit
PF02272 1 DHHA1 DHHA1 domain
PF02284 1 COX5A Cytochrome c oxidase subunit Va
PF02290 1 SRP14 Signal recognition particle 14kD protein
PF02291 1 TFIID-31kDa Transcription initiation factor IID, 31kD subunit
PF02296 1 Alpha_adaptin_C Alpha adaptin AP2, C-terminal domain
PF02297 1 COX6B Cytochrome oxidase c subunit VIb
PF02301 2 HORMA HORMA domain
PF02330 1 MAM33 Mitochondrial glycoprotein
PF02338 1 OTU OTU-like cysteine protease
PF02347 2 GDC-P Glycine cleavage system P-protein
PF02353 5 CMAS Mycolic acid cyclopropane synthetase
PF02358 1 Trehalose_PPase Trehalose-phosphatase
PF02359 1 CDC48_N Cell division protein 48 (CDC48), N-terminal domain
PF02364 1 Glucan_synthase 1,3-beta-glucan synthase component
PF02366 3 PMT Dolichyl-phosphate-mannose-protein mannosyltransferase
PF02373 5 JmjC JmjC domain, hydroxylase
PF02374 1 ArsA_ATPase Anion-transporting ATPase
PF02375 1 JmjN jmjN domain
PF02383 4 Syja_N SacI homology domain
PF02386 3 TrkH Cation transport protein
PF02390 3 Methyltransf_4 Putative methyltransferase
PF02391 1 MoaE MoaE protein
PF02403 1 Seryl_tRNA_N Seryl-tRNA synthetase N-terminal domain
PF02410 1 RsfS Ribosomal silencing factor during starvation
PF02421 7 FeoB_N Ferrous iron transport protein B
PF02423 1 OCD_Mu_crystall Ornithine cyclodeaminase/mu-crystallin family
PF02434 1 Fringe Fringe-like
PF02436 1 PYC_OADA Conserved carboxylase domain
PF02441 2 Flavoprotein Flavoprotein
PF02450 1 LCAT Lecithin:cholesterol acyltransferase
PF02453 1 Reticulon Reticulon
PF02460 4 Patched Patched family
PF02463 6 SMC_N RecF/RecN/SMC N terminal domain
PF02466 4 Tim17 Tim17/Tim22/Tim23/Pmp24 family
PF02469 2 Fasciclin Fasciclin domain
PF02475 3 Met_10 Met-10+ like-protein
PF02487 2 CLN3 CLN3 protein
PF02492 4 cobW CobW/HypB/UreG, nucleotide-binding domain
PF02502 1 LacAB_rpiB Ribose/Galactose Isomerase
PF02515 6 CoA_transf_3 CoA-transferase family III
PF02516 2 STT3 Oligosaccharyl transferase STT3 subunit
PF02517 1 CPBP CPBP intramembrane metalloprotease
PF02518 12 HATPase_c Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
PF02525 2 Flavodoxin_2 Flavodoxin-like fold
PF02535 11 Zip ZIP Zinc transporter
PF02537 2 CRCB CrcB-like protein, Camphor Resistance (CrcB)
PF02538 1 Hydantoinase_B Hydantoinase B/oxoprolinase
PF02540 2 NAD_synthase NAD synthase
PF02541 1 Ppx-GppA Ppx/GppA phosphatase family
PF02544 4 Steroid_dh 3-oxo-5-alpha-steroid 4-dehydrogenase
PF02545 1 Maf Maf-like protein
PF02548 1 Pantoate_transf Ketopantoate hydroxymethyltransferase
PF02551 1 Acyl_CoA_thio Acyl-CoA thioesterase
PF02558 4 ApbA Ketopantoate reductase PanE/ApbA
PF02569 1 Pantoate_ligase Pantoate-beta-alanine ligase
PF02580 1 Tyr_Deacylase D-Tyr-tRNA(Tyr) deacylase
PF02581 1 TMP-TENI Thiamine monophosphate synthase
PF02582 3 DUF155 Uncharacterised ACR, YagE family COG1723
PF02585 1 PIG-L GlcNAc-PI de-N-acetylase
PF02586 1 SRAP SOS response associated peptidase (SRAP)
PF02594 1 DUF167 Uncharacterised ACR, YggU family COG1872
PF02597 1 ThiS ThiS family
PF02598 1 Methyltrn_RNA_3 Putative RNA methyltransferase
PF02602 1 HEM4 Uroporphyrinogen-III synthase HemD
PF02615 1 Ldh_2 Malate/L-lactate dehydrogenase
PF02617 1 ClpS ATP-dependent Clp protease adaptor protein ClpS
PF02626 1 CT_A_B Carboxyltransferase domain, subdomain A and B
PF02627 1 CMD Carboxymuconolactone decarboxylase family
PF02628 1 COX15-CtaA Cytochrome oxidase assembly protein
PF02629 3 CoA_binding CoA binding domain
PF02630 1 SCO1-SenC SCO1/SenC
PF02636 3 Methyltransf_28 Putative S-adenosyl-L-methionine-dependent methyltransferase
PF02656 6 DUF202 Domain of unknown function (DUF202)
PF02666 4 PS_Dcarbxylase Phosphatidylserine decarboxylase
PF02668 8 TauD Taurine catabolism dioxygenase TauD, TfdA family
PF02671 2 PAH Paired amphipathic helix repeat
PF02676 1 TYW3 Methyltransferase TYW3
PF02678 2 Pirin Pirin
PF02682 1 CT_C_D Carboxyltransferase domain, subdomain C and D
PF02686 1 Glu-tRNAGln Glu-tRNAGln amidotransferase C subunit
PF02696 1 UPF0061 Uncharacterized ACR, YdiU/UPF0061 family
PF02714 5 RSN1_7TM Calcium-dependent channel, 7TM region, putative phosphate
PF02719 8 Polysacc_synt_2 Polysaccharide biosynthesis protein
PF02724 1 CDC45 CDC45-like protein
PF02727 1 Cu_amine_oxidN2 Copper amine oxidase, N2 domain
PF02728 1 Cu_amine_oxidN3 Copper amine oxidase, N3 domain
PF02729 2 OTCace_N Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
PF02731 1 SKIP_SNW SKIP/SNW domain
PF02732 3 ERCC4 ERCC4 domain
PF02733 1 Dak1 Dak1 domain
PF02734 1 Dak2 DAK2 domain
PF02735 2 Ku Ku70/Ku80 beta-barrel domain
PF02736 1 Myosin_N Myosin N-terminal SH3-like domain
PF02737 4 3HCDH_N 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
PF02738 1 Ald_Xan_dh_C2 Molybdopterin-binding domain of aldehyde dehydrogenase
PF02744 1 GalP_UDP_tr_C Galactose-1-phosphate uridyl transferase, C-terminal domain
PF02746 1 MR_MLE_N Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
PF02747 1 PCNA_C Proliferating cell nuclear antigen, C-terminal domain
PF02749 1 QRPTase_N Quinolinate phosphoribosyl transferase, N-terminal domain
PF02751 1 TFIIA_gamma_C Transcription initiation factor IIA, gamma subunit
PF02752 2 Arrestin_C Arrestin (or S-antigen), C-terminal domain
PF02765 2 POT1 Telomeric single stranded DNA binding POT1/CDC13
PF02769 3 AIRS_C AIR synthase related protein, C-terminal domain
PF02770 9 Acyl-CoA_dh_M Acyl-CoA dehydrogenase, middle domain
PF02771 8 Acyl-CoA_dh_N Acyl-CoA dehydrogenase, N-terminal domain
PF02772 1 S-AdoMet_synt_M S-adenosylmethionine synthetase, central domain
PF02773 1 S-AdoMet_synt_C S-adenosylmethionine synthetase, C-terminal domain
PF02774 1 Semialdhyde_dhC Semialdehyde dehydrogenase, dimerisation domain
PF02775 3 TPP_enzyme_C Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
PF02776 3 TPP_enzyme_N Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
PF02777 3 Sod_Fe_C Iron/manganese superoxide dismutases, C-terminal domain
PF02779 4 Transket_pyr Transketolase, pyrimidine binding domain
PF02780 3 Transketolase_C Transketolase, C-terminal domain
PF02781 1 G6PD_C Glucose-6-phosphate dehydrogenase, C-terminal domain
PF02782 4 FGGY_C FGGY family of carbohydrate kinases, C-terminal domain
PF02784 1 Orn_Arg_deC_N Pyridoxal-dependent decarboxylase, pyridoxal binding domain
PF02785 4 Biotin_carb_C Biotin carboxylase C-terminal domain
PF02786 8 CPSase_L_D2 Carbamoyl-phosphate synthase L chain, ATP binding domain
PF02787 2 CPSase_L_D3 Carbamoyl-phosphate synthetase large chain, oligomerisation domain
PF02791 1 DDT DDT domain
PF02792 1 Mago_nashi Mago nashi protein
PF02798 6 GST_N Glutathione S-transferase, N-terminal domain
PF02799 1 NMT_C Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain
PF02800 1 Gp_dh_C Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
PF02801 17 Ketoacyl-synt_C Beta-ketoacyl synthase, C-terminal domain
PF02803 6 Thiolase_C Thiolase, C-terminal domain
PF02806 1 Alpha-amylase_C Alpha amylase, C-terminal all-beta domain
PF02809 2 UIM Ubiquitin interaction motif
PF02811 1 PHP PHP domain
PF02812 1 ELFV_dehydrog_N Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
PF02815 3 MIR MIR domain
PF02817 3 E3_binding e3 binding domain
PF02823 1 ATP-synt_DE_N ATP synthase, Delta/Epsilon chain, beta-sandwich domain
PF02824 3 TGS TGS domain
PF02826 7 2-Hacid_dh_C D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
PF02833 2 DHHA2 DHHA2 domain
PF02836 4 Glyco_hydro_2_C Glycosyl hydrolases family 2, TIM barrel domain
PF02837 2 Glyco_hydro_2_N Glycosyl hydrolases family 2, sugar binding domain
PF02838 1 Glyco_hydro_20b Glycosyl hydrolase family 20, domain 2
PF02840 1 Prp18 Prp18 domain
PF02843 1 GARS_C Phosphoribosylglycinamide synthetase, C domain
PF02844 1 GARS_N Phosphoribosylglycinamide synthetase, N domain
PF02845 4 CUE CUE domain
PF02847 2 MA3 MA3 domain
PF02852 2 Pyr_redox_dim Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
PF02854 5 MIF4G MIF4G domain
PF02861 1 Clp_N Clp amino terminal domain, pathogenicity island component
PF02862 2 DDHD DDHD domain
PF02866 2 Ldh_1_C lactate/malate dehydrogenase, alpha/beta C-terminal domain
PF02867 1 Ribonuc_red_lgC Ribonucleotide reductase, barrel domain
PF02868 1 Peptidase_M4_C Thermolysin metallopeptidase, alpha-helical domain
PF02872 3 5_nucleotid_C 5'-nucleotidase, C-terminal domain
PF02874 4 ATP-synt_ab_N ATP synthase alpha/beta family, beta-barrel domain
PF02878 3 PGM_PMM_I Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
PF02879 1 PGM_PMM_II Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
PF02880 1 PGM_PMM_III Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
PF02881 2 SRP54_N SRP54-type protein, helical bundle domain
PF02882 2 THF_DHG_CYH_C Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
PF02883 3 Alpha_adaptinC2 Adaptin C-terminal domain
PF02885 1 Glycos_trans_3N Glycosyl transferase family, helical bundle domain
PF02887 1 PK_C Pyruvate kinase, alpha/beta domain
PF02889 7 Sec63 Sec63 Brl domain
PF02891 2 zf-MIZ MIZ/SP-RING zinc finger
PF02893 2 GRAM GRAM domain
PF02894 3 GFO_IDH_MocA_C Oxidoreductase family, C-terminal alpha/beta domain
PF02898 1 NO_synthase Nitric oxide synthase, oxygenase domain
PF02900 1 LigB Catalytic LigB subunit of aromatic ring-opening dioxygenase
PF02902 3 Peptidase_C48 Ulp1 protease family, C-terminal catalytic domain
PF02906 1 Fe_hyd_lg_C Iron only hydrogenase large subunit, C-terminal domain
PF02910 1 Succ_DH_flav_C Fumarate reductase flavoprotein C-term
PF02913 3 FAD-oxidase_C FAD linked oxidases, C-terminal domain
PF02915 1 Rubrerythrin Rubrerythrin
PF02917 1 Pertussis_S1 Pertussis toxin, subunit 1
PF02919 1 Topoisom_I_N Eukaryotic DNA topoisomerase I, DNA binding fragment
PF02921 1 UCR_TM Ubiquinol cytochrome reductase transmembrane region
PF02922 1 CBM_48 Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
PF02926 1 THUMP THUMP domain
PF02928 1 zf-C5HC2 C5HC2 zinc finger
PF02933 1 CDC48_2 Cell division protein 48 (CDC48), domain 2
PF02934 1 GatB_N GatB/GatE catalytic domain
PF02935 1 COX7C Cytochrome c oxidase subunit VIIc
PF02936 1 COX4 Cytochrome c oxidase subunit IV
PF02939 1 UcrQ UcrQ family
PF02940 1 mRNA_triPase mRNA capping enzyme, beta chain
PF02953 2 zf-Tim10_DDP Tim10/DDP family zinc finger
PF02958 2 EcKinase Ecdysteroid kinase
PF02966 1 DIM1 Mitosis protein DIM1
PF02969 3 TAF TATA box binding protein associated factor (TAF)
PF02970 1 TBCA Tubulin binding cofactor A
PF02978 1 SRP_SPB Signal peptide binding domain
PF02984 3 Cyclin_C Cyclin, C-terminal domain
PF02985 6 HEAT HEAT repeat
PF02990 1 EMP70 Endomembrane protein 70
PF02991 1 Atg8 Autophagy protein Atg8 ubiquitin like
PF02995 1 DUF229 Protein of unknown function (DUF229)
PF02996 2 Prefoldin Prefoldin subunit
PF03006 4 HlyIII Haemolysin-III related
PF03009 4 GDPD Glycerophosphoryl diester phosphodiesterase family
PF03028 1 Dynein_heavy Dynein heavy chain region D6 P-loop domain
PF03029 3 ATP_bind_1 Conserved hypothetical ATP binding protein
PF03031 6 NIF NLI interacting factor-like phosphatase
PF03033 3 Glyco_transf_28 Glycosyltransferase family 28 N-terminal domain
PF03051 1 Peptidase_C1_2 Peptidase C1-like family
PF03055 1 RPE65 Retinal pigment epithelial membrane protein
PF03060 4 NMO Nitronate monooxygenase
PF03061 6 4HBT Thioesterase superfamily
PF03062 4 MBOAT MBOAT, membrane-bound O-acyltransferase family
PF03065 1 Glyco_hydro_57 Glycosyl hydrolase family 57
PF03067 1 LPMO_10 Lytic polysaccharide mono-oxygenase, cellulose-degrading
PF03068 2 PAD Protein-arginine deiminase (PAD)
PF03069 3 FmdA_AmdA Acetamidase/Formamidase family
PF03070 1 TENA_THI-4 TENA/THI-4/PQQC family
PF03073 1 TspO_MBR TspO/MBR family
PF03074 1 GCS Glutamate-cysteine ligase
PF03080 2 Neprosin Neprosin
PF03081 1 Exo70 Exo70 exocyst complex subunit
PF03095 2 PTPA Phosphotyrosyl phosphate activator (PTPA) protein
PF03097 1 BRO1 BRO1-like domain
PF03098 3 An_peroxidase Animal haem peroxidase
PF03099 3 BPL_LplA_LipB Biotin/lipoate A/B protein ligase family
PF03101 2 FAR1 FAR1 DNA-binding domain
PF03104 6 DNA_pol_B_exo1 DNA polymerase family B, exonuclease domain
PF03105 6 SPX SPX domain
PF03107 1 C1_2 C1 domain
PF03109 5 ABC1 ABC1 family
PF03114 5 BAR BAR domain
PF03124 2 EXS EXS family
PF03126 1 Plus-3 Plus-3 domain
PF03127 2 GAT GAT domain
PF03129 6 HGTP_anticodon Anticodon binding domain
PF03130 2 HEAT_PBS PBS lyase HEAT-like repeat
PF03131 1 bZIP_Maf bZIP Maf transcription factor
PF03133 1 TTL Tubulin-tyrosine ligase family
PF03134 2 TB2_DP1_HVA22 TB2/DP1, HVA22 family
PF03142 9 Chitin_synth_2 Chitin synthase
PF03143 4 GTP_EFTU_D3 Elongation factor Tu C-terminal domain
PF03144 9 GTP_EFTU_D2 Elongation factor Tu domain 2
PF03147 1 FDX-ACB Ferredoxin-fold anticodon binding domain
PF03151 5 TPT Triose-phosphate Transporter family
PF03152 2 UFD1 Ubiquitin fusion degradation protein UFD1
PF03153 1 TFIIA Transcription factor IIA, alpha/beta subunit
PF03155 3 Alg6_Alg8 ALG6, ALG8 glycosyltransferase family
PF03159 2 XRN_N XRN 5'-3' exonuclease N-terminus
PF03162 1 Y_phosphatase2 Tyrosine phosphatase family
PF03164 1 Mon1 Trafficking protein Mon1
PF03167 2 UDG Uracil DNA glycosylase superfamily
PF03169 14 OPT OPT oligopeptide transporter protein
PF03171 9 2OG-FeII_Oxy 2OG-Fe(II) oxygenase superfamily
PF03176 1 MMPL MMPL family
PF03177 2 Nucleoporin_C Non-repetitive/WGA-negative nucleoporin C-terminal
PF03178 3 CPSF_A CPSF A subunit region
PF03179 1 V-ATPase_G Vacuolar (H+)-ATPase G subunit
PF03188 1 Cytochrom_B561 Eukaryotic cytochrome b561
PF03190 1 Thioredox_DsbH Protein of unknown function, DUF255
PF03194 1 LUC7 LUC7 N_terminus
PF03198 5 Glyco_hydro_72 Glucanosyltransferase
PF03199 1 GSH_synthase Eukaryotic glutathione synthase
PF03200 2 Glyco_hydro_63 Glycosyl hydrolase family 63 C-terminal domain
PF03208 1 PRA1 PRA1 family protein
PF03209 2 PUCC PUCC protein
PF03215 4 Rad17 Rad17 P-loop domain
PF03221 2 HTH_Tnp_Tc5 Tc5 transposase DNA-binding domain
PF03223 1 V-ATPase_C V-ATPase subunit C
PF03224 2 V-ATPase_H_N V-ATPase subunit H
PF03226 2 Yippee-Mis18 Yippee zinc-binding/DNA-binding /Mis18, centromere assembly
PF03227 1 GILT Gamma interferon inducible lysosomal thiol reductase (GILT)
PF03232 1 COQ7 Ubiquinone biosynthesis protein COQ7
PF03234 1 CDC37_N Cdc37 N terminal kinase binding
PF03239 1 FTR1 Iron permease FTR1 family
PF03248 1 Rer1 Rer1 family
PF03256 1 ANAPC10 Anaphase-promoting complex, subunit 10 (APC10)
PF03271 1 EB1 EB1-like C-terminal motif
PF03291 2 Pox_MCEL mRNA capping enzyme
PF03297 1 Ribosomal_S25 S25 ribosomal protein
PF03298 1 Stanniocalcin Stanniocalcin family
PF03308 1 MeaB Methylmalonyl Co-A mutase-associated GTPase MeaB
PF03328 2 HpcH_HpaI HpcH/HpaI aldolase/citrate lyase family
PF03330 1 DPBB_1 Lytic transglycolase
PF03332 1 PMM Eukaryotic phosphomannomutase
PF03343 1 SART-1 SART-1 family
PF03345 1 DDOST_48kD Oligosaccharyltransferase 48 kDa subunit beta
PF03348 1 Serinc Serine incorporator (Serinc)
PF03357 7 Snf7 Snf7
PF03358 2 FMN_red NADPH-dependent FMN reductase
PF03364 1 Polyketide_cyc Polyketide cyclase / dehydrase and lipid transport
PF03366 2 YEATS YEATS family
PF03367 2 zf-ZPR1 ZPR1 zinc-finger domain
PF03368 2 Dicer_dimer Dicer dimerisation domain
PF03370 1 CBM_21 Carbohydrate/starch-binding module (family 21)
PF03371 1 PRP38 PRP38 family
PF03372 7 Exo_endo_phos Endonuclease/Exonuclease/phosphatase family
PF03378 1 CAS_CSE1 CAS/CSE protein, C-terminus
PF03381 1 CDC50 LEM3 (ligand-effect modulator 3) family / CDC50 family
PF03388 2 Lectin_leg-like Legume-like lectin family
PF03398 1 Ist1 Regulator of Vps4 activity in the MVB pathway
PF03399 3 SAC3_GANP SAC3/GANP family
PF03403 1 PAF-AH_p_II Platelet-activating factor acetylhydrolase, isoform II
PF03404 4 Mo-co_dimer Mo-co oxidoreductase dimerisation domain
PF03407 2 Nucleotid_trans Nucleotide-diphospho-sugar transferase
PF03416 1 Peptidase_C54 Peptidase family C54
PF03435 2 Sacchrp_dh_NADP Saccharopine dehydrogenase NADP binding domain
PF03439 1 Spt5-NGN Early transcription elongation factor of RNA pol II, NGN section
PF03441 3 FAD_binding_7 FAD binding domain of DNA photolyase
PF03443 1 Glyco_hydro_61 Glycosyl hydrolase family 61
PF03446 7 NAD_binding_2 NAD binding domain of 6-phosphogluconate dehydrogenase
PF03447 1 NAD_binding_3 Homoserine dehydrogenase, NAD binding domain
PF03450 1 CO_deh_flav_C CO dehydrogenase flavoprotein C-terminal domain
PF03452 3 Anp1 Anp1
PF03453 1 MoeA_N MoeA N-terminal region (domain I and II)
PF03454 1 MoeA_C MoeA C-terminal region (domain IV)
PF03455 1 dDENN dDENN domain
PF03456 2 uDENN uDENN domain
PF03460 3 NIR_SIR_ferr Nitrite/Sulfite reductase ferredoxin-like half domain
PF03462 1 PCRF PCRF domain
PF03463 2 eRF1_1 eRF1 domain 1
PF03464 2 eRF1_2 eRF1 domain 2
PF03465 2 eRF1_3 eRF1 domain 3
PF03467 1 Smg4_UPF3 Smg-4/UPF3 family
PF03473 2 MOSC MOSC domain
PF03476 2 MOSC_N MOSC N-terminal beta barrel domain
PF03477 1 ATP-cone ATP cone domain
PF03481 1 SUA5 Putative GTP-binding controlling metal-binding
PF03483 1 B3_4 B3/4 domain
PF03484 1 B5 tRNA synthetase B5 domain
PF03486 2 HI0933_like HI0933-like protein
PF03501 1 S10_plectin Plectin/S10 domain
PF03517 1 Voldacs Regulator of volume decrease after cellular swelling
PF03522 1 SLC12 Solute carrier family 12
PF03531 1 SSrecog Structure-specific recognition protein (SSRP1)
PF03537 1 Glyco_hydro_114 Glycoside-hydrolase family GH114
PF03540 1 TFIID_30kDa Transcription initiation factor TFIID 23-30kDa subunit
PF03542 1 Tuberin Tuberin
PF03547 1 Mem_trans Membrane transport protein
PF03552 1 Cellulose_synt Cellulose synthase
PF03556 1 Cullin_binding Cullin binding
PF03561 2 Allantoicase Allantoicase repeat
PF03568 1 Peptidase_C50 Peptidase family C50
PF03571 1 Peptidase_M49 Peptidase family M49
PF03572 1 Peptidase_S41 Peptidase family S41
PF03576 1 Peptidase_S58 Peptidase family S58
PF03583 3 LIP Secretory lipase
PF03587 1 EMG1 EMG1/NEP1 methyltransferase
PF03595 1 SLAC1 Voltage-dependent anion channel
PF03600 1 CitMHS Citrate transporter
PF03604 1 DNA_RNApol_7kD DNA directed RNA polymerase, 7 kDa subunit
PF03619 2 Solute_trans_a Organic solute transporter Ostalpha
PF03630 1 Fumble Fumble
PF03635 1 Vps35 Vacuolar protein sorting-associated protein 35
PF03637 3 Mob1_phocein Mob1/phocein family
PF03639 1 Glyco_hydro_81 Glycosyl hydrolase family 81 N-terminal domain
PF03641 1 Lysine_decarbox Possible lysine decarboxylase
PF03643 1 Vps26 Vacuolar protein sorting-associated protein 26
PF03645 1 Tctex-1 Tctex-1 family
PF03647 1 Tmemb_14 Transmembrane proteins 14C
PF03650 1 MPC Mitochondrial pyruvate carriers
PF03656 1 Pam16 Pam16
PF03660 1 PHF5 PHF5-like protein
PF03661 1 UPF0121 Uncharacterised protein family (UPF0121)
PF03663 7 Glyco_hydro_76 Glycosyl hydrolase family 76
PF03666 2 NPR3 Nitrogen Permease regulator of amino acid transport activity 3
PF03669 1 UPF0139 Uncharacterised protein family (UPF0139)
PF03676 2 UPF0183 Uncharacterised protein family (UPF0183)
PF03690 1 UPF0160 Uncharacterised protein family (UPF0160)
PF03702 1 AnmK Anhydro-N-acetylmuramic acid kinase
PF03715 1 Noc2 Noc2p family
PF03719 2 Ribosomal_S5_C Ribosomal protein S5, C-terminal domain
PF03720 1 UDPG_MGDP_dh_C UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
PF03721 3 UDPG_MGDP_dh_N UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
PF03725 2 RNase_PH_C 3' exoribonuclease family, domain 2
PF03727 4 Hexokinase_2 Hexokinase
PF03730 1 Ku_C Ku70/Ku80 C-terminal arm
PF03731 2 Ku_N Ku70/Ku80 N-terminal alpha/beta domain
PF03733 1 YccF Inner membrane component domain
PF03737 1 RraA-like Aldolase/RraA
PF03738 2 GSP_synth Glutathionylspermidine synthase preATP-grasp
PF03746 1 LamB_YcsF LamB/YcsF family
PF03747 1 ADP_ribosyl_GH ADP-ribosylglycohydrolase
PF03764 3 EFG_IV Elongation factor G, domain IV
PF03765 3 CRAL_TRIO_N CRAL/TRIO, N-terminal domain
PF03770 2 IPK Inositol polyphosphate kinase
PF03781 1 FGE-sulfatase Sulfatase-modifying factor enzyme 1
PF03795 1 YCII YCII-related domain
PF03796 1 DnaB_C DnaB-like helicase C terminal domain
PF03798 4 TRAM_LAG1_CLN8 TLC domain
PF03800 1 Nuf2 Nuf2 family
PF03801 1 Ndc80_HEC HEC/Ndc80p family
PF03807 3 F420_oxidored NADP oxidoreductase coenzyme F420-dependent
PF03810 8 IBN_N Importin-beta N-terminal domain
PF03813 1 Nrap Nrap protein domain 1
PF03815 1 LCCL LCCL domain
PF03820 1 Mtc Tricarboxylate carrier
PF03824 2 NicO High-affinity nickel-transport protein
PF03828 3 PAP_assoc Cid1 family poly A polymerase
PF03834 1 Rad10 Binding domain of DNA repair protein Ercc1 (rad10/Swi10)
PF03835 3 Rad4 Rad4 transglutaminase-like domain
PF03836 2 RasGAP_C RasGAP C-terminus
PF03839 1 Sec62 Translocation protein Sec62
PF03847 1 TFIID_20kDa Transcription initiation factor TFIID subunit A
PF03849 1 Tfb2 Transcription factor Tfb2
PF03850 1 Tfb4 Transcription factor Tfb4
PF03851 1 UvdE UV-endonuclease UvdE
PF03853 1 YjeF_N YjeF-related protein N-terminus
PF03856 2 SUN Beta-glucosidase (SUN family)
PF03870 1 RNA_pol_Rpb8 RNA polymerase Rpb8
PF03871 1 RNA_pol_Rpb5_N RNA polymerase Rpb5, N-terminal domain
PF03874 2 RNA_pol_Rpb4 RNA polymerase Rpb4
PF03876 2 SHS2_Rpb7-N SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397
PF03878 1 YIF1 YIF1
PF03879 1 Cgr1 Cgr1 family
PF03881 1 Fructosamin_kin Fructosamine kinase
PF03900 1 Porphobil_deamC Porphobilinogen deaminase, C-terminal domain
PF03901 4 Glyco_transf_22 Alg9-like mannosyltransferase family
PF03907 1 Spo7 Spo7-like protein
PF03908 1 Sec20 Sec20
PF03909 3 BSD BSD domain
PF03911 1 Sec61_beta Sec61beta family
PF03914 3 CBF CBF/Mak21 family
PF03915 1 AIP3 Actin interacting protein 3
PF03917 1 GSH_synth_ATP Eukaryotic glutathione synthase, ATP binding domain
PF03919 1 mRNA_cap_C mRNA capping enzyme, C-terminal domain
PF03931 2 Skp1_POZ Skp1 family, tetramerisation domain
PF03932 1 CutC CutC family
PF03936 1 Terpene_synth_C Terpene synthase family, metal binding domain
PF03937 1 Sdh5 Flavinator of succinate dehydrogenase
PF03939 1 Ribosomal_L23eN Ribosomal protein L23, N-terminal domain
PF03941 1 INCENP_ARK-bind Inner centromere protein, ARK binding region
PF03943 1 TAP_C TAP C-terminal domain
PF03946 2 Ribosomal_L11_N Ribosomal protein L11, N-terminal domain
PF03947 2 Ribosomal_L2_C Ribosomal Proteins L2, C-terminal domain
PF03949 1 Malic_M Malic enzyme, NAD binding domain
PF03950 2 tRNA-synt_1c_C tRNA synthetases class I (E and Q), anti-codon binding domain
PF03951 1 Gln-synt_N Glutamine synthetase, beta-Grasp domain
PF03952 1 Enolase_N Enolase, N-terminal domain
PF03953 4 Tubulin_C Tubulin C-terminal domain
PF03959 4 FSH1 Serine hydrolase (FSH1)
PF03969 3 AFG1_ATPase AFG1-like ATPase
PF03972 1 MmgE_PrpD MmgE/PrpD family
PF03980 1 Nnf1 Nnf1
PF03981 1 Ubiq_cyt_C_chap Ubiquinol-cytochrome C chaperone
PF03982 1 DAGAT Diacylglycerol acyltransferase
PF03983 1 SHD1 SLA1 homology domain 1, SHD1
PF03985 1 Paf1 Paf1
PF03986 1 Autophagy_N Autophagocytosis associated protein (Atg3), N-terminal domain
PF03987 2 Autophagy_act_C Autophagocytosis associated protein, active-site domain
PF03997 1 VPS28 VPS28 protein
PF03998 1 Utp11 Utp11 protein
PF03999 1 MAP65_ASE1 Microtubule associated protein (MAP65/ASE1 family)
PF04000 3 Sas10_Utp3 Sas10/Utp3/C1D family
PF04003 3 Utp12 Dip2/Utp12 Family
PF04004 1 Leo1 Leo1-like protein
PF04005 1 Hus1 Hus1-like protein
PF04006 1 Mpp10 Mpp10 protein
PF04030 1 ALO D-arabinono-1,4-lactone oxidase
PF04031 1 Las1 Las1-like
PF04032 2 Rpr2 RNAse P Rpr2/Rpp21/SNM1 subunit domain
PF04034 1 Ribo_biogen_C Ribosome biogenesis protein, C-terminal
PF04037 1 DUF382 Domain of unknown function (DUF382)
PF04042 3 DNA_pol_E_B DNA polymerase alpha/epsilon subunit B
PF04045 1 P34-Arc Arp2/3 complex, 34 kD subunit p34-Arc
PF04046 1 PSP PSP
PF04048 1 Sec8_exocyst Sec8 exocyst complex component specific domain
PF04049 1 ANAPC8 Anaphase promoting complex subunit 8 / Cdc23
PF04050 1 Upf2 Up-frameshift suppressor 2
PF04051 3 TRAPP Transport protein particle (TRAPP) component
PF04053 2 Coatomer_WDAD Coatomer WD associated region
PF04054 1 Not1 CCR4-Not complex component, Not1
PF04055 4 Radical_SAM Radical SAM superfamily
PF04056 2 Ssl1 Ssl1-like
PF04057 1 Rep-A_N Replication factor-A protein 1, N-terminal domain
PF04059 1 RRM_2 RNA recognition motif 2
PF04061 1 ORMDL ORMDL family
PF04063 1 DUF383 Domain of unknown function (DUF383)
PF04064 1 DUF384 Domain of unknown function (DUF384)
PF04065 1 Not3 Not1 N-terminal domain, CCR4-Not complex component
PF04068 2 RLI Possible Fer4-like domain in RNase L inhibitor, RLI
PF04072 2 LCM Leucine carboxyl methyltransferase
PF04078 1 Rcd1 Cell differentiation family, Rcd1-like
PF04080 1 Per1 Per1-like family
PF04081 1 DNA_pol_delta_4 DNA polymerase delta, subunit 4
PF04082 65 Fungal_trans Fungal specific transcription factor domain
PF04083 2 Abhydro_lipase Partial alpha/beta-hydrolase lipase region
PF04084 1 ORC2 Origin recognition complex subunit 2
PF04086 2 SRP-alpha_N Signal recognition particle, alpha subunit, N-terminal
PF04088 1 Peroxin-13_N Peroxin 13, N-terminal region
PF04091 1 Sec15 Exocyst complex subunit Sec15-like
PF04095 2 NAPRTase Nicotinate phosphoribosyltransferase (NAPRTase) family
PF04096 1 Nucleoporin2 Nucleoporin autopeptidase
PF04097 1 Nic96 Nup93/Nic96
PF04098 1 Rad52_Rad22 Rad52/22 family double-strand break repair protein
PF04099 2 Sybindin Sybindin-like family
PF04100 1 Vps53_N Vps53-like, N-terminal
PF04101 1 Glyco_tran_28_C Glycosyltransferase family 28 C-terminal domain
PF04104 1 DNA_primase_lrg Eukaryotic and archaeal DNA primase, large subunit
PF04106 1 APG5 Autophagy protein Apg5
PF04108 2 APG17 Autophagy protein Apg17
PF04109 1 APG9 Autophagy protein Apg9
PF04110 2 APG12 Ubiquitin-like autophagy protein Apg12
PF04111 1 APG6 Apg6 BARA domain
PF04112 1 Mak10 Mak10 subunit, NatC N(alpha)-terminal acetyltransferase
PF04113 1 Gpi16 Gpi16 subunit, GPI transamidase component
PF04114 1 Gaa1 Gaa1-like, GPI transamidase component
PF04115 1 Ureidogly_lyase Ureidoglycolate lyase
PF04116 7 FA_hydroxylase Fatty acid hydroxylase superfamily
PF04117 5 Mpv17_PMP22 Mpv17 / PMP22 family
PF04118 1 Dopey_N Dopey, N-terminal
PF04121 1 Nup84_Nup100 Nuclear pore protein 84 / 107
PF04124 2 Dor1 Dor1-like family
PF04127 1 DFP DNA / pantothenate metabolism flavoprotein
PF04129 1 Vps52 Vps52 / Sac2 family
PF04130 5 GCP_C_terminal Gamma tubulin complex component C-terminal
PF04133 1 Vps55 Vacuolar protein sorting 55
PF04136 1 Sec34 Sec34-like family
PF04137 1 ERO1 Endoplasmic Reticulum Oxidoreductin 1 (ERO1)
PF04139 2 Rad9 Rad9
PF04140 1 ICMT Isoprenylcysteine carboxyl methyltransferase (ICMT) family
PF04142 4 Nuc_sug_transp Nucleotide-sugar transporter
PF04143 1 Sulf_transp Sulphur transport
PF04145 3 Ctr Ctr copper transporter family
PF04146 2 YTH YT521-B-like domain
PF04147 1 Nop14 Nop14-like family
PF04148 1 Erv26 Transmembrane adaptor Erv26
PF04152 1 Mre11_DNA_bind Mre11 DNA-binding presumed domain
PF04153 1 NOT2_3_5 NOT2 / NOT3 / NOT5 family
PF04157 2 EAP30 EAP30/Vps36 family
PF04158 1 Sof1 Sof1-like domain
PF04161 1 Arv1 Arv1-like family
PF04172 2 LrgB LrgB-like family
PF04176 1 TIP41 TIP41-like family
PF04177 1 TAP42 TAP42-like family
PF04178 2 Got1 Got1/Sft2-like family
PF04179 1 Init_tRNA_PT Rit1 DUSP-like domain
PF04180 1 LTV Low temperature viability protein
PF04181 1 RPAP2_Rtr1 Rtr1/RPAP2 family
PF04182 1 B-block_TFIIIC B-block binding subunit of TFIIIC
PF04185 2 Phosphoesterase Phosphoesterase family
PF04188 1 Mannosyl_trans2 Mannosyltransferase (PIG-V)
PF04189 1 Gcd10p Gcd10p family
PF04190 1 DUF410 Protein of unknown function (DUF410)
PF04191 4 PEMT Phospholipid methyltransferase
PF04192 1 Utp21 Utp21 specific WD40 associated putative domain
PF04193 11 PQ-loop PQ loop repeat
PF04194 1 PDCD2_C Programmed cell death protein 2, C-terminal putative domain
PF04199 2 Cyclase Putative cyclase
PF04209 2 HgmA homogentisate 1,2-dioxygenase
PF04212 2 MIT MIT (microtubule interacting and transport) domain
PF04218 1 CENP-B_N CENP-B N-terminal DNA-binding domain
PF04227 1 Indigoidine_A Indigoidine synthase A like protein
PF04248 2 NTP_transf_9 Domain of unknown function (DUF427)
PF04252 1 RNA_Me_trans Predicted SAM-dependent RNA methyltransferase
PF04253 2 TFR_dimer Transferrin receptor-like dimerisation domain
PF04258 2 Peptidase_A22B Signal peptide peptidase
PF04261 1 Dyp_perox Dyp-type peroxidase family
PF04263 1 TPK_catalytic Thiamin pyrophosphokinase, catalytic domain
PF04265 1 TPK_B1_binding Thiamin pyrophosphokinase, vitamin B1 binding domain
PF04280 1 Tim44 Tim44-like domain
PF04281 1 Tom22 Mitochondrial import receptor subunit Tom22
PF04299 1 FMN_bind_2 Putative FMN-binding domain
PF04321 9 RmlD_sub_bind RmlD substrate binding domain
PF04324 1 Fer2_BFD BFD-like [2Fe-2S] binding domain
PF04366 2 Ysc84 Las17-binding protein actin regulator
PF04371 1 PAD_porph Porphyromonas-type peptidyl-arginine deiminase
PF04376 1 ATE_N Arginine-tRNA-protein transferase, N terminus
PF04377 1 ATE_C Arginine-tRNA-protein transferase, C terminus
PF04383 1 KilA-N KilA-N domain
PF04387 1 PTPLA Protein tyrosine phosphatase-like protein, PTPLA
PF04388 1 Hamartin Hamartin protein
PF04389 8 Peptidase_M28 Peptidase family M28
PF04406 1 TP6A_N Type IIB DNA topoisomerase
PF04408 8 HA2 Helicase associated domain (HA2)
PF04410 2 Gar1 Gar1/Naf1 RNA binding region
PF04418 1 DUF543 Domain of unknown function (DUF543)
PF04420 1 CHD5 CHD5-like protein
PF04424 1 MINDY_DUB MINDY deubiquitinase
PF04427 6 Brix Brix domain
PF04428 1 Choline_kin_N Choline kinase N terminus
PF04433 4 SWIRM SWIRM domain
PF04437 2 RINT1_TIP1 RINT-1 / TIP-1 family
PF04438 3 zf-HIT HIT zinc finger
PF04442 1 CtaG_Cox11 Cytochrome c oxidase assembly protein CtaG/Cox11
PF04444 2 Dioxygenase_N Catechol dioxygenase N terminus
PF04446 1 Thg1 tRNAHis guanylyltransferase
PF04450 1 BSP Peptidase of plants and bacteria
PF04468 1 PSP1 PSP1 C-terminal conserved region
PF04471 1 Mrr_cat Restriction endonuclease
PF04478 1 Mid2 Mid2 like cell wall stress sensor
PF04488 6 Gly_transf_sug Glycosyltransferase sugar-binding region containing DXD motif
PF04494 1 TFIID_NTD2 WD40 associated region in TFIID subunit, NTD2 domain
PF04495 1 GRASP55_65 GRASP55/65 PDZ-like domain
PF04499 1 SAPS SIT4 phosphatase-associated protein
PF04502 2 DUF572 Family of unknown function (DUF572)
PF04506 1 Rft-1 Rft protein
PF04511 1 DER1 Der1-like family
PF04515 2 Choline_transpo Plasma-membrane choline transporter
PF04516 1 CP2 CP2 transcription factor
PF04525 1 LOR LURP-one-related
PF04547 2 Anoctamin Calcium-activated chloride channel
PF04560 3 RNA_pol_Rpb2_7 RNA polymerase Rpb2, domain 7
PF04561 3 RNA_pol_Rpb2_2 RNA polymerase Rpb2, domain 2
PF04563 3 RNA_pol_Rpb2_1 RNA polymerase beta subunit
PF04564 2 U-box U-box domain
PF04565 3 RNA_pol_Rpb2_3 RNA polymerase Rpb2, domain 3
PF04566 2 RNA_pol_Rpb2_4 RNA polymerase Rpb2, domain 4
PF04567 2 RNA_pol_Rpb2_5 RNA polymerase Rpb2, domain 5
PF04568 1 IATP Mitochondrial ATPase inhibitor, IATP
PF04571 1 Lipin_N lipin, N-terminal conserved region
PF04573 1 SPC22 Signal peptidase subunit
PF04588 2 HIG_1_N Hypoxia induced protein conserved region
PF04597 1 Ribophorin_I Ribophorin I
PF04603 1 Mog1 Ran-interacting Mog1 protein
PF04614 1 Pex19 Pex19 protein family
PF04615 1 Utp14 Utp14 protein
PF04622 1 ERG2_Sigma1R ERG2 and Sigma1 receptor like protein
PF04627 1 ATP-synt_Eps Mitochondrial ATP synthase epsilon chain
PF04628 3 Sedlin_N Sedlin, N-terminal conserved region
PF04641 1 Rtf2 Rtf2 RING-finger
PF04646 1 DUF604 Protein of unknown function, DUF604
PF04652 1 Vta1 Vta1 like
PF04658 1 TAFII55_N TAFII55 protein conserved region
PF04666 1 Glyco_transf_54 N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region
PF04670 14 Gtr1_RagA Gtr1/RagA G protein conserved region
PF04675 4 DNA_ligase_A_N DNA ligase N terminus
PF04677 3 CwfJ_C_1 Protein similar to CwfJ C-terminus 1
PF04678 1 MCU Mitochondrial calcium uniporter
PF04679 3 DNA_ligase_A_C ATP dependent DNA ligase C terminal region
PF04681 2 Bys1 Blastomyces yeast-phase-specific protein
PF04683 1 Proteasom_Rpn13 Proteasome complex subunit Rpn13 ubiquitin receptor
PF04695 2 Pex14_N Peroxisomal membrane anchor protein (Pex14p) conserved region
PF04696 1 Pinin_SDK_memA pinin/SDK/memA/ protein conserved region
PF04699 1 P16-Arc ARP2/3 complex 16 kDa subunit (p16-Arc)
PF04707 2 PRELI PRELI-like family
PF04715 2 Anth_synt_I_N Anthranilate synthase component I, N terminal region
PF04718 1 ATP-synt_G Mitochondrial ATP synthase g subunit
PF04719 1 TAFII28 hTAFII28-like protein conserved region
PF04722 1 Ssu72 Ssu72-like protein
PF04724 1 Glyco_transf_17 Glycosyltransferase family 17
PF04727 1 ELMO_CED12 ELMO/CED-12 family
PF04729 1 ASF1_hist_chap ASF1 like histone chaperone
PF04733 1 Coatomer_E Coatomer epsilon subunit
PF04734 3 Ceramidase_alk Neutral/alkaline non-lysosomal ceramidase, N-terminal
PF04739 1 AMPKBI 5'-AMP-activated protein kinase beta subunit, interaction domain
PF04749 1 PLAC8 PLAC8 family
PF04750 1 Far-17a_AIG1 FAR-17a/AIG1-like protein
PF04756 4 OST3_OST6 OST3 / OST6 family, transporter family
PF04757 3 Pex2_Pex12 Pex2 / Pex12 amino terminal region
PF04762 1 IKI3 IKI3 family
PF04768 2 NAT NAT, N-acetyltransferase, of N-acetylglutamate synthase
PF04769 1 MATalpha_HMGbox Mating-type protein MAT alpha 1 HMG-box
PF04774 1 HABP4_PAI-RBP1 Hyaluronan / mRNA binding family
PF04777 2 Evr1_Alr Erv1 / Alr family
PF04791 2 LMBR1 LMBR1-like membrane protein
PF04795 1 PAPA-1 PAPA-1-like conserved region
PF04800 1 ETC_C1_NDUFA4 ETC complex I subunit conserved region
PF04801 1 Sin_N Sin-like protein conserved region
PF04802 1 SMK-1 Component of IIS longevity pathway SMK-1
PF04810 3 zf-Sec23_Sec24 Sec23/Sec24 zinc finger
PF04811 3 Sec23_trunk Sec23/Sec24 trunk domain
PF04815 3 Sec23_helical Sec23/Sec24 helical domain
PF04818 3 CTD_bind RNA polymerase II-binding domain.
PF04820 2 Trp_halogenase Tryptophan halogenase
PF04821 1 TIMELESS Timeless protein
PF04824 2 Rad21_Rec8 Conserved region of Rad21 / Rec8 like protein
PF04825 2 Rad21_Rec8_N N terminus of Rad21 / Rec8 like protein
PF04826 1 Arm_2 Armadillo-like
PF04828 2 GFA Glutathione-dependent formaldehyde-activating enzyme
PF04840 1 Vps16_C Vps16, C-terminal region
PF04841 1 Vps16_N Vps16, N-terminal region
PF04847 1 Calcipressin Calcipressin
PF04851 36 ResIII Type III restriction enzyme, res subunit
PF04855 2 SNF5 SNF5 / SMARCB1 / INI1
PF04857 3 CAF1 CAF1 family ribonuclease
PF04869 1 Uso1_p115_head Uso1 / p115 like vesicle tethering protein, head region
PF04871 1 Uso1_p115_C Uso1 / p115 like vesicle tethering protein, C terminal region
PF04874 1 Mak16 Mak16 protein C-terminal region
PF04880 1 NUDE_C NUDE protein, C-terminal conserved region
PF04882 1 Peroxin-3 Peroxin-3
PF04884 1 DUF647 Vitamin B6 photo-protection and homoeostasis
PF04889 1 Cwf_Cwc_15 Cwf15/Cwc15 cell cycle control protein
PF04892 1 VanZ VanZ like family
PF04893 1 Yip1 Yip1 domain
PF04898 1 Glu_syn_central Glutamate synthase central domain
PF04900 2 Fcf1 Fcf1
PF04909 7 Amidohydro_2 Amidohydrolase
PF04910 1 Tcf25 Transcriptional repressor TCF25
PF04912 1 Dynamitin Dynamitin
PF04921 1 XAP5 XAP5, circadian clock regulator
PF04922 1 DIE2_ALG10 DIE2/ALG10 family
PF04926 1 PAP_RNA-bind Poly(A) polymerase predicted RNA binding domain
PF04928 1 PAP_central Poly(A) polymerase central domain
PF04931 1 DNA_pol_phi DNA polymerase phi
PF04934 1 Med6 MED6 mediator sub complex component
PF04935 1 SURF6 Surfeit locus protein 6
PF04938 1 SIP1 Survival motor neuron (SMN) interacting protein 1 (SIP1)
PF04939 1 RRS1 Ribosome biogenesis regulatory protein (RRS1)
PF04950 2 RIBIOP_C 40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal
PF04959 1 ARS2 Arsenite-resistance protein 2
PF04968 2 CHORD CHORD
PF04969 3 CS CS domain
PF04979 1 IPP-2 Protein phosphatase inhibitor 2 (IPP-2)
PF04981 1 NMD3 NMD3 family
PF04982 1 HPP HPP family
PF04983 3 RNA_pol_Rpb1_3 RNA polymerase Rpb1, domain 3
PF04987 1 PigN Phosphatidylinositolglycan class N (PIG-N)
PF04990 1 RNA_pol_Rpb1_7 RNA polymerase Rpb1, domain 7
PF04991 2 LicD LicD family
PF04992 1 RNA_pol_Rpb1_6 RNA polymerase Rpb1, domain 6
PF04997 3 RNA_pol_Rpb1_1 RNA polymerase Rpb1, domain 1
PF04998 3 RNA_pol_Rpb1_5 RNA polymerase Rpb1, domain 5
PF05000 3 RNA_pol_Rpb1_4 RNA polymerase Rpb1, domain 4
PF05002 1 SGS SGS domain
PF05004 1 IFRD Interferon-related developmental regulator (IFRD)
PF05007 1 Mannosyl_trans Mannosyltransferase (PIG-M)
PF05008 1 V-SNARE Vesicle transport v-SNARE protein N-terminus
PF05011 1 DBR1 Lariat debranching enzyme, C-terminal domain
PF05019 1 Coq4 Coenzyme Q (ubiquinone) biosynthesis protein Coq4
PF05020 1 zf-NPL4 NPL4 family, putative zinc binding region
PF05021 1 NPL4 NPL4 family
PF05022 1 SRP40_C SRP40, C-terminal domain
PF05024 1 Gpi1 N-acetylglucosaminyl transferase component (Gpi1)
PF05026 1 DCP2 Dcp2, box A domain
PF05029 1 TIMELESS_C Timeless protein C terminal region
PF05032 1 Spo12 Spo12 family
PF05033 1 Pre-SET Pre-SET motif
PF05046 1 Img2 Mitochondrial large subunit ribosomal protein (Img2)
PF05047 3 L51_S25_CI-B8 Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain
PF05051 1 COX17 Cytochrome C oxidase copper chaperone (COX17)
PF05057 5 DUF676 Putative serine esterase (DUF676)
PF05063 1 MT-A70 MT-A70
PF05064 1 Nsp1_C Nsp1-like C-terminal region
PF05071 2 NDUFA12 NADH ubiquinone oxidoreductase subunit NDUFA12
PF05088 1 Bac_GDH Bacterial NAD-glutamate dehydrogenase
PF05091 1 eIF-3_zeta Eukaryotic translation initiation factor 3 subunit 7 (eIF-3)
PF05093 1 CIAPIN1 Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis
PF05127 3 Helicase_RecD Helicase
PF05129 1 Elf1 Transcription elongation factor Elf1 like
PF05131 1 Pep3_Vps18 Pep3/Vps18/deep orange family
PF05141 3 DIT1_PvcA Pyoverdine/dityrosine biosynthesis protein
PF05148 1 Methyltransf_8 Hypothetical methyltransferase
PF05153 1 MIOX Myo-inositol oxygenase
PF05158 1 RNA_pol_Rpc34 RNA polymerase Rpc34 subunit
PF05160 2 DSS1_SEM1 DSS1/SEM1 family
PF05175 8 MTS Methyltransferase small domain
PF05176 1 ATP-synt_10 ATP10 protein
PF05178 1 Kri1 KRI1-like family
PF05179 1 CDC73_C RNA pol II accessory factor, Cdc73 family, C-terminal
PF05180 1 zf-DNL DNL zinc finger
PF05181 1 XPA_C XPA protein C-terminus
PF05182 1 Fip1 Fip1 motif
PF05183 3 RdRP RNA dependent RNA polymerase
PF05185 1 PRMT5 PRMT5 arginine-N-methyltransferase
PF05186 1 Dpy-30 Dpy-30 motif
PF05187 1 ETF_QO Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S
PF05188 5 MutS_II MutS domain II
PF05189 1 RTC_insert RNA 3'-terminal phosphate cyclase (RTC), insert domain
PF05190 3 MutS_IV MutS family domain IV
PF05191 2 ADK_lid Adenylate kinase, active site lid
PF05192 5 MutS_III MutS domain III
PF05193 8 Peptidase_M16_C Peptidase M16 inactive domain
PF05195 2 AMP_N Aminopeptidase P, N-terminal domain
PF05199 11 GMC_oxred_C GMC oxidoreductase
PF05205 1 COMPASS-Shg1 COMPASS (Complex proteins associated with Set1p) component shg1
PF05207 2 zf-CSL CSL zinc finger
PF05208 1 ALG3 ALG3 protein
PF05221 2 AdoHcyase S-adenosyl-L-homocysteine hydrolase
PF05222 2 AlaDh_PNT_N Alanine dehydrogenase/PNT, N-terminal domain
PF05224 3 NDT80_PhoG NDT80 / PhoG like DNA-binding family
PF05236 1 TAF4 Transcription initiation factor TFIID component TAF4 family
PF05238 1 CENP-N Kinetochore protein CHL4 like
PF05241 1 EBP Emopamil binding protein
PF05251 1 Ost5 Oligosaccharyltransferase subunit 5
PF05254 1 UPF0203 Uncharacterised protein family (UPF0203)
PF05255 1 UPF0220 Uncharacterised protein family (UPF0220)
PF05277 3 DUF726 Protein of unknown function (DUF726)
PF05282 2 AAR2 AAR2 protein
PF05285 1 SDA1 SDA1
PF05291 1 Bystin Bystin
PF05327 1 RRN3 RNA polymerase I specific transcription initiation factor RRN3
PF05328 1 CybS CybS, succinate dehydrogenase cytochrome B small subunit
PF05336 1 rhaM L-rhamnose mutarotase
PF05345 1 He_PIG Putative Ig domain
PF05346 1 DUF747 Eukaryotic membrane protein family
PF05347 5 Complex1_LYR Complex 1 protein (LYR family)
PF05348 1 UMP1 Proteasome maturation factor UMP1
PF05362 2 Lon_C Lon protease (S16) C-terminal proteolytic domain
PF05368 10 NmrA NmrA-like family
PF05378 2 Hydant_A_N Hydantoinase/oxoprolinase N-terminal region
PF05383 2 La La domain
PF05388 1 Carbpep_Y_N Carboxypeptidase Y pro-peptide
PF05405 1 Mt_ATP-synt_B Mitochondrial ATP synthase B chain precursor (ATP-synt_B)
PF05406 1 WGR WGR domain
PF05460 1 ORC6 Origin recognition complex subunit 6 (ORC6)
PF05462 3 Dicty_CAR Slime mold cyclic AMP receptor
PF05470 1 eIF-3c_N Eukaryotic translation initiation factor 3 subunit 8 N-terminus
PF05486 1 SRP9-21 Signal recognition particle 9 kDa protein (SRP9)
PF05493 1 ATP_synt_H ATP synthase subunit H
PF05495 2 zf-CHY CHY zinc finger
PF05496 13 RuvB_N Holliday junction DNA helicase RuvB P-loop domain
PF05502 1 Dynactin_p62 Dynactin p62 family
PF05508 1 Ran-binding RanGTP-binding protein
PF05529 1 Bap31 Bap31/Bap29 transmembrane region
PF05532 1 CsbD CsbD-like
PF05536 1 Neurochondrin Neurochondrin
PF05546 1 She9_MDM33 She9 / Mdm33 family
PF05557 1 MAD Mitotic checkpoint protein
PF05572 4 Peptidase_M43 Pregnancy-associated plasma protein-A
PF05577 3 Peptidase_S28 Serine carboxypeptidase S28
PF05602 1 CLPTM1 Cleft lip and palate transmembrane protein 1 (CLPTM1)
PF05603 1 DUF775 Protein of unknown function (DUF775)
PF05615 1 THOC7 Tho complex subunit 7
PF05620 1 TMEM208_SND2 SRP-independent targeting protein 2/TMEM208
PF05622 1 HOOK HOOK protein
PF05625 1 PAXNEB PAXNEB protein
PF05631 1 MFS_5 Sugar-tranasporters, 12 TM
PF05637 6 Glyco_transf_34 galactosyl transferase GMA12/MNN10 family
PF05645 1 RNA_pol_Rpc82 RNA polymerase III subunit RPC82
PF05648 2 PEX11 Peroxisomal biogenesis factor 11 (PEX11)
PF05649 1 Peptidase_M13_N Peptidase family M13
PF05652 1 DcpS Scavenger mRNA decapping enzyme (DcpS) N-terminal
PF05653 3 Mg_trans_NIPA Magnesium transporter NIPA
PF05669 1 Med31 SOH1
PF05670 2 NFACT-R_1 NFACT protein RNA binding domain
PF05673 1 DUF815 Protein of unknown function (DUF815)
PF05676 1 NDUF_B7 NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7)
PF05677 1 DUF818 Chlamydia CHLPS protein (DUF818)
PF05680 1 ATP-synt_E ATP synthase E chain
PF05686 4 Glyco_transf_90 Glycosyl transferase family 90
PF05690 1 ThiG Thiazole biosynthesis protein ThiG
PF05691 1 Raffinose_syn Raffinose synthase or seed imbibition protein Sip1
PF05693 1 Glycogen_syn Glycogen synthase
PF05704 1 Caps_synth Capsular polysaccharide synthesis protein
PF05705 2 DUF829 Eukaryotic protein of unknown function (DUF829)
PF05712 1 MRG MRG
PF05719 1 GPP34 Golgi phosphoprotein 3 (GPP34)
PF05721 5 PhyH Phytanoyl-CoA dioxygenase (PhyH)
PF05724 2 TPMT Thiopurine S-methyltransferase (TPMT)
PF05726 1 Pirin_C Pirin C-terminal cupin domain
PF05729 6 NACHT NACHT domain
PF05730 12 CFEM CFEM domain
PF05739 7 SNARE SNARE domain
PF05742 1 TANGO2 Transport and Golgi organisation 2
PF05743 1 UEV UEV domain
PF05746 1 DALR_1 DALR anticodon binding domain
PF05773 4 RWD RWD domain
PF05783 1 DLIC Dynein light intermediate chain (DLIC)
PF05786 1 Cnd2 Condensin complex subunit 2
PF05794 2 Tcp11 T-complex protein 11
PF05804 1 KAP Kinesin-associated protein (KAP)
PF05817 1 Ribophorin_II Oligosaccharyltransferase subunit Ribophorin II
PF05821 1 NDUF_B8 NADH-ubiquinone oxidoreductase ASHI subunit (CI-ASHI or NDUFB8)
PF05833 1 FbpA Fibronectin-binding protein A N-terminus (FbpA)
PF05834 1 Lycopene_cycl Lycopene cyclase protein
PF05837 1 CENP-H Centromere protein H (CENP-H)
PF05839 1 Apc13p Apc13p protein
PF05841 1 Apc15p Apc15p protein
PF05843 1 Suf Suppressor of forked protein (Suf)
PF05856 1 ARPC4 ARP2/3 complex 20 kDa subunit (ARPC4)
PF05859 1 Mis12 Mis12 protein
PF05870 1 PA_decarbox Phenolic acid decarboxylase (PAD)
PF05871 1 ESCRT-II ESCRT-II complex subunit
PF05873 1 Mt_ATP-synt_D ATP synthase D chain, mitochondrial (ATP5H)
PF05879 1 RHD3 Root hair defective 3 GTP-binding protein (RHD3)
PF05890 1 Ebp2 Eukaryotic rRNA processing protein EBP2
PF05891 2 Methyltransf_PK AdoMet dependent proline di-methyltransferase
PF05903 1 Peptidase_C97 PPPDE putative peptidase domain
PF05907 1 DUF866 Eukaryotic protein of unknown function (DUF866)
PF05916 3 Sld5 GINS complex protein
PF05920 3 Homeobox_KN Homeobox KN domain
PF05922 8 Inhibitor_I9 Peptidase inhibitor I9
PF05958 1 tRNA_U5-meth_tr tRNA (Uracil-5-)-methyltransferase
PF05970 2 PIF1 PIF1-like helicase
PF05971 2 Methyltransf_10 RNA methyltransferase
PF05978 2 UNC-93 Ion channel regulatory protein UNC-93
PF05983 1 Med7 MED7 protein
PF05995 1 CDO_I Cysteine dioxygenase type I
PF05997 1 Nop52 Nucleolar protein,Nop52
PF06003 1 SMN Survival motor neuron protein (SMN)
PF06011 4 TRP Transient receptor potential (TRP) ion channel
PF06012 1 DUF908 Domain of Unknown Function (DUF908)
PF06017 1 Myosin_TH1 Unconventional myosin tail, actin- and lipid-binding
PF06025 1 DUF913 Domain of Unknown Function (DUF913)
PF06026 1 Rib_5-P_isom_A Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
PF06027 2 SLC35F Solute carrier family 35
PF06028 1 DUF915 Alpha/beta hydrolase of unknown function (DUF915)
PF06032 1 DUF917 Protein of unknown function (DUF917)
PF06041 2 DUF924 Bacterial protein of unknown function (DUF924)
PF06046 1 Sec6 Exocyst complex component Sec6
PF06052 1 3-HAO 3-hydroxyanthranilic acid dioxygenase
PF06058 1 DCP1 Dcp1-like decapping family
PF06068 2 TIP49 TIP49 P-loop domain
PF06071 1 YchF-GTPase_C Protein of unknown function (DUF933)
PF06087 2 Tyr-DNA_phospho Tyrosyl-DNA phosphodiesterase
PF06090 1 Ins_P5_2-kin Inositol-pentakisphosphate 2-kinase
PF06093 1 Spt4 Spt4/RpoE2 zinc finger
PF06094 3 GGACT Gamma-glutamyl cyclotransferase, AIG2-like
PF06101 1 Vps62 Vacuolar protein sorting-associated protein 62
PF06102 1 RRP36 rRNA biogenesis protein RRP36
PF06108 1 DUF952 Protein of unknown function (DUF952)
PF06127 1 DUF962 Protein of unknown function (DUF962)
PF06144 1 DNA_pol3_delta DNA polymerase III, delta subunit
PF06148 1 COG2 COG (conserved oligomeric Golgi) complex component, COG2
PF06155 2 DUF971 Protein of unknown function (DUF971)
PF06159 1 DUF974 Protein of unknown function (DUF974)
PF06172 1 Cupin_5 Cupin superfamily (DUF985)
PF06179 1 Med22 Surfeit locus protein 5 subunit 22 of Mediator complex
PF06201 2 PITH PITH domain
PF06202 3 GDE_C Amylo-alpha-1,6-glucosidase
PF06218 2 NPR2 Nitrogen permease regulator 2
PF06220 1 zf-U1 U1 zinc finger
PF06221 1 zf-C2HC5 Putative zinc finger motif, C2HC5-type
PF06229 1 FRG1 FRG1-like domain
PF06244 1 Ccdc124 Coiled-coil domain-containing protein 124 /Oxs1
PF06246 1 Isy1 Isy1-like splicing family
PF06259 1 Abhydrolase_8 Alpha/beta hydrolase
PF06280 4 fn3_5 Fn3-like domain
PF06293 4 Kdo Lipopolysaccharide kinase (Kdo/WaaP) family
PF06320 1 GCN5L1 GCN5-like protein 1 (GCN5L1)
PF06325 4 PrmA Ribosomal protein L11 methyltransferase (PrmA)
PF06333 1 Med13_C Mediator complex subunit 13 C-terminal domain
PF06337 1 DUSP DUSP domain
PF06355 1 Aegerolysin Aegerolysin
PF06367 1 Drf_FH3 Diaphanous FH3 Domain
PF06371 2 Drf_GBD Diaphanous GTPase-binding Domain
PF06391 1 MAT1 CDK-activating kinase assembly factor MAT1
PF06395 1 CDC24 CDC24 Calponin
PF06398 2 Pex24p Integral peroxisomal membrane peroxin
PF06413 1 Neugrin Neugrin
PF06415 1 iPGM_N BPG-independent PGAM N-terminus (iPGM_N)
PF06417 1 DUF1077 Protein of unknown function (DUF1077)
PF06418 1 CTP_synth_N CTP synthase N-terminus
PF06419 1 COG6 Conserved oligomeric complex COG6
PF06420 1 Mgm101p Mitochondrial genome maintenance MGM101
PF06422 7 PDR_CDR CDR ABC transporter
PF06423 1 GWT1 GWT1
PF06424 1 PRP1_N PRP1 splicing factor, N-terminal
PF06427 1 UDP-g_GGTase UDP-glucose:Glycoprotein Glucosyltransferase
PF06428 2 Sec2p GDP/GTP exchange factor Sec2p
PF06432 1 GPI2 Phosphatidylinositol N-acetylglucosaminyltransferase
PF06437 1 ISN1 IMP-specific 5'-nucleotidase
PF06441 3 EHN Epoxide hydrolase N terminus
PF06463 1 Mob_synth_C Molybdenum Cofactor Synthesis C
PF06464 1 DMAP_binding DMAP1-binding Domain
PF06470 4 SMC_hinge SMC proteins Flexible Hinge Domain
PF06472 2 ABC_membrane_2 ABC transporter transmembrane region 2
PF06479 1 Ribonuc_2-5A Ribonuclease 2-5A
PF06480 1 FtsH_ext FtsH Extracellular
PF06487 1 SAP18 Sin3 associated polypeptide p18 (SAP18)
PF06500 1 DUF1100 Alpha/beta hydrolase of unknown function (DUF1100)
PF06516 1 NUP Purine nucleoside permease (NUP)
PF06544 1 DUF1115 Protein of unknown function (DUF1115)
PF06602 1 Myotub-related Myotubularin-like phosphatase domain
PF06609 16 TRI12 Fungal trichothecene efflux pump (TRI12)
PF06624 1 RAMP4 Ribosome associated membrane protein RAMP4
PF06628 3 Catalase-rel Catalase-related immune-responsive
PF06632 1 XRCC4 DNA double-strand break repair and V(D)J recombination protein XRCC4
PF06644 1 ATP11 ATP11 protein
PF06645 1 SPC12 Microsomal signal peptidase 12 kDa subunit (SPC12)
PF06650 1 SHR-BD SHR-binding domain of vacuolar-sorting associated protein 13
PF06657 1 Cep57_MT_bd Centrosome microtubule-binding domain of Cep57
PF06658 1 DUF1168 Protein of unknown function (DUF1168)
PF06682 1 SARAF SOCE-associated regulatory factor of calcium homoeostasis
PF06687 6 SUR7 SUR7/PalI family
PF06699 1 PIG-F GPI biosynthesis protein family Pig-F
PF06703 1 SPC25 Microsomal signal peptidase 25 kDa subunit (SPC25)
PF06723 7 MreB_Mbl MreB/Mbl protein
PF06726 1 BC10 Bladder cancer-related protein BC10
PF06728 2 PIG-U GPI transamidase subunit PIG-U
PF06732 1 Pescadillo_N Pescadillo N-terminus
PF06733 2 DEAD_2 DEAD_2
PF06738 1 ThrE Putative threonine/serine exporter
PF06741 1 LsmAD LsmAD domain
PF06742 1 DUF1214 Protein of unknown function (DUF1214)
PF06745 1 ATPase KaiC
PF06747 1 CHCH CHCH domain
PF06766 5 Hydrophobin_2 Fungal hydrophobin
PF06775 1 Seipin Putative adipose-regulatory protein (Seipin)
PF06777 1 HBB Helical and beta-bridge domain
PF06792 1 UPF0261 Uncharacterised protein family (UPF0261)
PF06807 1 Clp1 Pre-mRNA cleavage complex II protein Clp1
PF06813 2 Nodulin-like Nodulin-like
PF06814 2 Lung_7-TM_R Lung seven transmembrane receptor
PF06824 3 Glyco_hydro_125 Metal-independent alpha-mannosidase (GH125)
PF06831 1 H2TH Formamidopyrimidine-DNA glycosylase H2TH domain
PF06839 3 zf-GRF GRF zinc finger
PF06842 1 DUF1242 Protein of unknown function (DUF1242)
PF06858 1 NOG1 Nucleolar GTP-binding protein 1 (NOG1)
PF06862 1 UTP25 Utp25, U3 small nucleolar RNA-associated SSU processome protein 25
PF06863 1 DUF1254 Protein of unknown function (DUF1254)
PF06870 1 RNA_pol_I_A49 A49-like RNA polymerase I associated factor
PF06881 1 Elongin_A RNA polymerase II transcription factor SIII (Elongin) subunit A
PF06883 1 RNA_pol_Rpa2_4 RNA polymerase I, Rpa2 specific domain
PF06884 1 DUF1264 Protein of unknown function (DUF1264)
PF06911 1 Senescence Senescence-associated protein
PF06912 2 DUF1275 Protein of unknown function (DUF1275)
PF06916 1 DUF1279 Protein of unknown function (DUF1279)
PF06920 1 DHR-2 Dock homology region 2
PF06957 1 COPI_C Coatomer (COPI) alpha subunit C-terminus
PF06966 6 DUF1295 Protein of unknown function (DUF1295)
PF06968 1 BATS Biotin and Thiamin Synthesis associated domain
PF06978 1 POP1 Ribonucleases P/MRP protein subunit POP1
PF06984 1 MRP-L47 Mitochondrial 39-S ribosomal protein L47 (MRP-L47)
PF06985 9 HET Heterokaryon incompatibility protein (HET)
PF06991 1 MFAP1 Microfibril-associated/Pre-mRNA processing
PF06999 2 Suc_Fer-like Sucrase/ferredoxin-like
PF07019 1 Rab5ip Rab5-interacting protein (Rab5ip)
PF07021 1 MetW Methionine biosynthesis protein MetW
PF07034 1 ORC3_N Origin recognition complex (ORC) subunit 3 N-terminus
PF07039 1 DUF1325 SGF29 tudor-like domain
PF07047 1 OPA3 Optic atrophy 3 protein (OPA3)
PF07064 1 RIC1 RIC1
PF07065 1 D123 D123
PF07081 1 DUF1349 Protein of unknown function (DUF1349)
PF07093 1 SGT1 SGT1 protein
PF07103 1 DUF1365 Protein of unknown function (DUF1365)
PF07156 1 Prenylcys_lyase Prenylcysteine lyase
PF07171 1 MlrC_C MlrC C-terminus
PF07189 1 SF3b10 Splicing factor 3B subunit 10 (SF3b10)
PF07200 1 Mod_r Modifier of rudimentary (Mod(r)) protein
PF07217 2 Het-C Heterokaryon incompatibility protein Het-C
PF07228 2 SpoIIE Stage II sporulation protein E (SpoIIE)
PF07249 1 Cerato-platanin Cerato-platanin
PF07250 1 Glyoxal_oxid_N Glyoxal oxidase N-terminus
PF07264 2 EI24 Etoposide-induced protein 2.4 (EI24)
PF07281 1 INSIG Insulin-induced protein (INSIG)
PF07287 1 AtuA Acyclic terpene utilisation family protein AtuA
PF07297 1 DPM2 Dolichol phosphate-mannose biosynthesis regulatory protein (DPM2)
PF07304 1 SRA1 Steroid receptor RNA activator (SRA1)
PF07350 1 DUF1479 Protein of unknown function (DUF1479)
PF07364 1 DUF1485 Metallopeptidase family M81
PF07366 1 SnoaL SnoaL-like polyketide cyclase
PF07367 1 FB_lectin Fungal fruit body lectin
PF07393 2 Sec10 Exocyst complex component Sec10
PF07426 1 Dynactin_p22 Dynactin subunit p22
PF07478 9 Dala_Dala_lig_C D-ala D-ala ligase C-terminus
PF07479 1 NAD_Gly3P_dh_C NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
PF07491 1 PPI_Ypi1 Protein phosphatase inhibitor
PF07492 1 Trehalase_Ca-bi Neutral trehalase Ca2+ binding domain
PF07500 2 TFIIS_M Transcription factor S-II (TFIIS), central domain
PF07521 2 RMMBL Zn-dependent metallo-hydrolase RNA specificity domain
PF07522 2 DRMBL DNA repair metallo-beta-lactamase
PF07524 2 Bromo_TP Bromodomain associated
PF07529 2 HSA HSA
PF07534 2 TLD TLD
PF07535 1 zf-DBF DBF zinc finger
PF07539 1 DRIM Down-regulated in metastasis
PF07540 1 NOC3p Nucleolar complex-associated protein
PF07541 1 EIF_2_alpha Eukaryotic translation initiation factor 2 alpha subunit
PF07542 1 ATP12 ATP12 chaperone protein
PF07543 1 PGA2 Protein trafficking PGA2
PF07544 1 Med9 RNA polymerase II transcription mediator complex subunit 9
PF07557 1 Shugoshin_C Shugoshin C terminus
PF07558 1 Shugoshin_N Shugoshin N-terminal coiled-coil region
PF07569 1 Hira TUP1-like enhancer of split
PF07571 1 TAF6_C TAF6 C-terminal HEAT repeat domain
PF07572 1 BCNT Bucentaur or craniofacial development
PF07574 1 SMC_Nse1 Nse1 non-SMC component of SMC5-6 complex
PF07575 1 Nucleopor_Nup85 Nup85 Nucleoporin
PF07576 1 BRAP2 BRCA1-associated protein 2
PF07646 3 Kelch_2 Kelch motif
PF07647 5 SAM_2 SAM domain (Sterile alpha motif)
PF07650 1 KH_2 KH domain
PF07651 2 ANTH ANTH domain
PF07653 14 SH3_2 Variant SH3 domain
PF07662 1 Nucleos_tra2_C Na+ dependent nucleoside transporter C-terminus
PF07685 2 GATase_3 CobB/CobQ-like glutamine amidotransferase domain
PF07687 5 M20_dimer Peptidase dimerisation domain
PF07690 123 MFS_1 Major Facilitator Superfamily
PF07713 1 DUF1604 Protein of unknown function (DUF1604)
PF07714 93 Pkinase_Tyr Protein tyrosine kinase
PF07716 6 bZIP_2 Basic region leucine zipper
PF07717 8 OB_NTP_bind Oligonucleotide/oligosaccharide-binding (OB)-fold
PF07718 1 Coatamer_beta_C Coatomer beta C-terminal region
PF07719 10 TPR_2 Tetratricopeptide repeat
PF07721 2 TPR_4 Tetratricopeptide repeat
PF07722 3 Peptidase_C26 Peptidase C26
PF07724 12 AAA_2 AAA domain (Cdc48 subfamily)
PF07726 4 AAA_3 ATPase family associated with various cellular activities (AAA)
PF07728 24 AAA_5 AAA domain (dynein-related subfamily)
PF07731 7 Cu-oxidase_2 Multicopper oxidase
PF07732 7 Cu-oxidase_3 Multicopper oxidase
PF07738 1 Sad1_UNC Sad1 / UNC-like C-terminal
PF07741 1 BRF1 Brf1-like TBP-binding domain
PF07743 1 HSCB_C HSCB C-terminal oligomerisation domain
PF07744 1 SPOC SPOC domain
PF07748 1 Glyco_hydro_38C Glycosyl hydrolases family 38 C-terminal domain
PF07749 1 ERp29 Endoplasmic reticulum protein ERp29, C-terminal domain
PF07757 1 AdoMet_MTase Predicted AdoMet-dependent methyltransferase
PF07766 2 LETM1 LETM1-like protein
PF07767 1 Nop53 Nop53 (60S ribosomal biogenesis)
PF07774 1 EMC1_C ER membrane protein complex subunit 1, C-terminal
PF07778 1 CENP-I Mis6
PF07780 1 Spb1_C Spb1 C-terminal domain
PF07792 1 Afi1 Docking domain of Afi1 for Arf3 in vesicle trafficking
PF07798 2 DUF1640 Protein of unknown function (DUF1640)
PF07808 1 RED_N RED-like protein N-terminal region
PF07814 1 WAPL Wings apart-like protein regulation of heterochromatin
PF07817 1 GLE1 GLE1-like protein
PF07818 1 HCNGP HCNGP-like protein
PF07819 1 PGAP1 PGAP1-like protein
PF07842 1 GCFC GC-rich sequence DNA-binding factor-like protein
PF07855 1 ATG101 Autophagy-related protein 101
PF07859 14 Abhydrolase_3 alpha/beta hydrolase fold
PF07876 3 Dabb Stress responsive A/B Barrel Domain
PF07883 2 Cupin_2 Cupin domain
PF07890 1 Rrp15p Rrp15p
PF07896 1 DUF1674 Protein of unknown function (DUF1674)
PF07904 1 Eaf7 Chromatin modification-related protein EAF7
PF07910 1 Peptidase_C78 Peptidase family C78
PF07915 1 PRKCSH Glucosidase II beta subunit-like protein
PF07919 1 Gryzun Gryzun, putative trafficking through Golgi
PF07923 1 N1221 N1221-like protein
PF07926 1 TPR_MLP1_2 TPR/MLP1/MLP2-like protein
PF07928 1 Vps54 Vps54-like protein
PF07931 1 CPT Chloramphenicol phosphotransferase-like protein
PF07933 1 DUF1681 Protein of unknown function (DUF1681)
PF07934 1 OGG_N 8-oxoguanine DNA glycosylase, N-terminal domain
PF07938 1 Fungal_lectin Fungal fucose-specific lectin
PF07942 2 N2227 N2227-like protein
PF07944 1 Glyco_hydro_127 Beta-L-arabinofuranosidase, GH127
PF07946 1 DUF1682 Protein of unknown function (DUF1682)
PF07947 1 YhhN YhhN family
PF07950 1 DUF1691 Protein of unknown function (DUF1691)
PF07955 1 DUF1687 Protein of unknown function (DUF1687)
PF07956 1 DUF1690 Protein of Unknown function (DUF1690)
PF07958 1 DUF1688 Protein of unknown function (DUF1688)
PF07960 1 CBP4 CBP4
PF07962 1 Swi3 Replication Fork Protection Component Swi3
PF07967 1 zf-C3HC C3HC zinc finger-like
PF07969 7 Amidohydro_3 Amidohydrolase family
PF07970 2 COPIIcoated_ERV Endoplasmic reticulum vesicle transporter
PF07971 3 Glyco_hydro_92 Glycosyl hydrolase family 92
PF07973 2 tRNA_SAD Threonyl and Alanyl tRNA synthetase second additional domain
PF07975 1 C1_4 TFIIH C1-like domain
PF07976 4 Phe_hydrox_dim Phenol hydroxylase, C-terminal dimerisation domain
PF07978 2 NIPSNAP NIPSNAP
PF07983 2 X8 X8 domain
PF07985 1 SRR1 SRR1
PF07986 1 TBCC Tubulin binding cofactor C
PF07989 3 Cnn_1N Centrosomin N-terminal motif 1
PF07991 1 IlvN Acetohydroxy acid isomeroreductase, NADPH-binding domain
PF07992 25 Pyr_redox_2 Pyridine nucleotide-disulphide oxidoreductase
PF07993 19 NAD_binding_4 Male sterility protein
PF07994 1 NAD_binding_5 Myo-inositol-1-phosphate synthase
PF08003 1 Methyltransf_9 Protein of unknown function (DUF1698)
PF08007 1 Cupin_4 Cupin superfamily protein
PF08022 10 FAD_binding_8 FAD-binding domain
PF08028 7 Acyl-CoA_dh_2 Acyl-CoA dehydrogenase, C-terminal domain
PF08029 1 HisG_C HisG, C-terminal domain
PF08030 9 NAD_binding_6 Ferric reductase NAD binding domain
PF08031 7 BBE Berberine and berberine like
PF08032 1 SpoU_sub_bind RNA 2'-O ribose methyltransferase substrate binding
PF08033 3 Sec23_BS Sec23/Sec24 beta-sandwich domain
PF08045 1 CDC14 Cell division control protein 14, SIN component
PF08058 1 NPCC Nuclear pore complex component
PF08059 1 SEP SEP domain
PF08064 1 UME UME (NUC010) domain
PF08066 1 PMC2NT PMC2NT (NUC016) domain
PF08068 1 DKCLD DKCLD (NUC011) domain
PF08069 1 Ribosomal_S13_N Ribosomal S13/S15 N-terminal domain
PF08071 1 RS4NT RS4NT (NUC023) domain
PF08079 1 Ribosomal_L30_N Ribosomal L30 N-terminal domain
PF08082 1 PRO8NT PRO8NT (NUC069), PrP8 N-terminal domain
PF08083 1 PROCN PROCN (NUC071) domain
PF08084 1 PROCT PROCT (NUC072) domain
PF08101 1 DUF1708 Domain of unknown function (DUF1708)
PF08118 1 MDM31_MDM32 Yeast mitochondrial distribution and morphology (MDM) proteins
PF08122 1 NDUF_B12 NADH-ubiquinone oxidoreductase B12 subunit family
PF08123 1 DOT1 Histone methylation protein DOT1
PF08125 1 Mannitol_dh_C Mannitol dehydrogenase C-terminal domain
PF08142 2 AARP2CN AARP2CN (NUC121) domain
PF08144 1 CPL CPL (NUC119) domain
PF08145 1 BOP1NT BOP1NT (NUC169) domain
PF08146 1 BP28CT BP28CT (NUC211) domain
PF08147 1 DBP10CT DBP10CT (NUC160) domain
PF08148 2 DSHCT DSHCT (NUC185) domain
PF08149 1 BING4CT BING4CT (NUC141) domain
PF08154 1 NLE NLE (NUC135) domain
PF08155 1 NOGCT NOGCT (NUC087) domain
PF08156 2 NOP5NT NOP5NT (NUC127) domain
PF08158 1 NUC130_3NT NUC130/3NT domain
PF08159 2 NUC153 NUC153 domain
PF08161 1 NUC173 NUC173 domain
PF08164 1 TRAUB Apoptosis-antagonizing transcription factor, C-terminal
PF08167 1 RIX1 rRNA processing/ribosome biogenesis
PF08170 1 POPLD POPLD (NUC188) domain
PF08172 1 CASP_C CASP C terminal
PF08174 1 Anillin Cell division protein anillin
PF08193 1 INO80_Ies4 INO80 complex subunit Ies4
PF08202 1 MIS13 Mis12-Mtw1 protein family
PF08208 1 RNA_polI_A34 DNA-directed RNA polymerase I subunit RPA34.5
PF08211 1 dCMP_cyt_deam_2 Cytidine and deoxycytidylate deaminase zinc-binding region
PF08213 1 DUF1713 Mitochondrial domain of unknown function (DUF1713)
PF08214 1 HAT_KAT11 Histone acetylation protein
PF08216 1 CTNNBL Catenin-beta-like, Arm-motif containing nuclear
PF08217 1 DUF1712 Fungal domain of unknown function (DUF1712)
PF08219 1 TOM13 Outer membrane protein TOM13
PF08221 1 HTH_9 RNA polymerase III subunit RPC82 helix-turn-helix domain
PF08227 1 DASH_Hsk3 DASH complex subunit Hsk3 like
PF08228 1 RNase_P_pop3 RNase P subunit Pop3
PF08229 1 SHR3_chaperone ER membrane protein SH3
PF08231 1 SYF2 SYF2 splicing factor
PF08232 1 Striatin Striatin family
PF08234 1 Spindle_Spc25 Chromosome segregation protein Spc25
PF08235 1 LNS2 LNS2 (Lipin/Ned1/Smp2)
PF08236 1 SRI SRI (Set2 Rpb1 interacting) domain
PF08237 1 PE-PPE PE-PPE domain
PF08238 34 Sel1 Sel1 repeat
PF08240 18 ADH_N Alcohol dehydrogenase GroES-like domain
PF08241 38 Methyltransf_11 Methyltransferase domain
PF08242 19 Methyltransf_12 Methyltransferase domain
PF08243 1 SPT2 SPT2 chromatin protein
PF08244 1 Glyco_hydro_32C Glycosyl hydrolases family 32 C terminal
PF08245 1 Mur_ligase_M Mur ligase middle domain
PF08264 5 Anticodon_1 Anticodon-binding domain of tRNA
PF08265 1 YL1_C YL1 nuclear protein C-terminal domain
PF08267 2 Meth_synt_1 Cobalamin-independent synthase, N-terminal domain
PF08271 1 TF_Zn_Ribbon TFIIB zinc-binding
PF08282 10 Hydrolase_3 haloacid dehalogenase-like hydrolase
PF08284 1 RVP_2 Retroviral aspartyl protease
PF08285 1 DPM3 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3)
PF08286 1 Spc24 Spc24 subunit of Ndc80
PF08287 1 DASH_Spc19 Spc19
PF08288 1 PIGA PIGA (GPI anchor biosynthesis)
PF08292 1 RNA_pol_Rbc25 RNA polymerase III subunit Rpc25
PF08293 1 MRP-S33 Mitochondrial ribosomal subunit S27
PF08294 1 TIM21 TIM21
PF08295 1 Sin3_corepress Sin3 family co-repressor
PF08297 1 U3_snoRNA_assoc U3 snoRNA associated
PF08298 1 AAA_PrkA PrkA AAA domain
PF08302 1 tRNA_lig_CPD Fungal tRNA ligase phosphodiesterase domain
PF08303 1 tRNA_lig_kinase tRNA ligase kinase domain
PF08309 1 LVIVD LVIVD repeat
PF08311 1 Mad3_BUB1_I Mad3/BUB1 homology region 1
PF08312 1 cwf21 cwf21 domain
PF08313 1 SCA7 SCA7, zinc-binding domain
PF08314 1 Sec39 Secretory pathway protein Sec39
PF08315 1 cwf18 cwf18 pre-mRNA splicing factor
PF08316 2 Pal1 Pal1 cell morphology protein
PF08317 1 Spc7 Spc7 kinetochore protein
PF08318 1 COG4 COG4 transport protein
PF08320 1 PIG-X PIG-X / PBN1
PF08321 1 PPP5 PPP5 TPR repeat region
PF08324 1 PUL PUL domain
PF08325 3 WLM WLM domain
PF08326 1 ACC_central Acetyl-CoA carboxylase, central region
PF08327 1 AHSA1 Activator of Hsp90 ATPase homolog 1-like protein
PF08351 1 DUF1726 Domain of unknown function (DUF1726)
PF08354 1 DUF1729 Domain of unknown function (DUF1729)
PF08355 1 EF_assoc_1 EF hand associated
PF08356 1 EF_assoc_2 EF hand associated
PF08367 1 M16C_assoc Peptidase M16C associated
PF08375 1 Rpn3_C Proteasome regulatory subunit C-terminal
PF08385 1 DHC_N1 Dynein heavy chain, N-terminal region 1
PF08386 2 Abhydrolase_4 TAP-like protein
PF08389 4 Xpo1 Exportin 1-like protein
PF08390 2 TRAM1 TRAM1-like protein
PF08393 1 DHC_N2 Dynein heavy chain, N-terminal region 2
PF08407 3 Chitin_synth_1N Chitin synthase N-terminal
PF08418 1 Pol_alpha_B_N DNA polymerase alpha subunit B N-terminal
PF08423 3 Rad51 Rad51
PF08424 1 NRDE-2 NRDE-2, necessary for RNA interference
PF08426 1 ICE2 ICE2
PF08427 1 DUF1741 Domain of unknown function (DUF1741)
PF08429 1 PLU-1 PLU-1-like protein
PF08432 1 Vfa1 AAA-ATPase Vps4-associated protein 1
PF08433 1 KTI12 Chromatin associated protein KTI12
PF08438 1 MMR_HSR1_C GTPase of unknown function C-terminal
PF08442 3 ATP-grasp_2 ATP-grasp domain
PF08443 1 RimK RimK-like ATP-grasp domain
PF08445 5 FR47 FR47-like protein
PF08446 1 PAS_2 PAS fold
PF08447 4 PAS_3 PAS fold
PF08448 1 PAS_4 PAS fold
PF08449 3 UAA UAA transporter family
PF08450 2 SGL SMP-30/Gluconolactonase/LRE-like region
PF08457 1 Sfi1 Sfi1 spindle body protein
PF08477 33 Roc Ras of Complex, Roc, domain of DAPkinase
PF08491 1 SE Squalene epoxidase
PF08492 1 SRP72 SRP72 RNA-binding domain
PF08493 2 AflR Aflatoxin regulatory protein
PF08498 1 Sterol_MT_C Sterol methyltransferase C-terminal
PF08501 1 Shikimate_dh_N Shikimate dehydrogenase substrate binding domain
PF08502 1 LeuA_dimer LeuA allosteric (dimerisation) domain
PF08506 2 Cse1 Cse1
PF08507 1 COPI_assoc COPI associated protein
PF08508 1 DUF1746 Fungal domain of unknown function (DUF1746)
PF08509 1 Ad_cyc_g-alpha Adenylate cyclase G-alpha binding domain
PF08510 1 PIG-P PIG-P
PF08511 1 COQ9 COQ9
PF08512 3 Rtt106 Histone chaperone Rttp106-like
PF08513 3 LisH LisH
PF08514 1 STAG STAG domain
PF08518 2 GIT_SHD Spa2 homology domain (SHD) of GIT
PF08519 1 RFC1 Replication factor RFC1 C terminal domain
PF08520 1 DUF1748 Fungal protein of unknown function (DUF1748)
PF08523 1 MBF1 Multiprotein bridging factor 1
PF08528 3 Whi5 Whi5 like
PF08534 4 Redoxin Redoxin
PF08538 1 DUF1749 Protein of unknown function (DUF1749)
PF08539 1 HbrB HbrB-like
PF08540 1 HMG_CoA_synt_C Hydroxymethylglutaryl-coenzyme A synthase C terminal
PF08542 3 Rep_fac_C Replication factor C C-terminal domain
PF08543 2 Phos_pyr_kin Phosphomethylpyrimidine kinase
PF08544 4 GHMP_kinases_C GHMP kinases C terminal
PF08546 4 ApbA_C Ketopantoate reductase PanE/ApbA C terminal
PF08547 2 CIA30 Complex I intermediate-associated protein 30 (CIA30)
PF08549 1 SWI-SNF_Ssr4 Fungal domain of unknown function (DUF1750)
PF08550 2 DUF1752 Fungal protein of unknown function (DUF1752)
PF08551 1 DUF1751 Eukaryotic integral membrane protein (DUF1751)
PF08552 1 Kei1 Inositolphosphorylceramide synthase subunit Kei1
PF08553 1 VID27 VID27 C-terminal WD40-like domain
PF08555 1 DUF1754 Eukaryotic family of unknown function (DUF1754)
PF08557 1 Lipid_DES Sphingolipid Delta4-desaturase (DES)
PF08558 1 TRF Telomere repeat binding factor (TRF)
PF08559 1 Cut8 Cut8, nuclear proteasome tether protein
PF08561 1 Ribosomal_L37 Mitochondrial ribosomal protein L37
PF08564 1 CDC37_C Cdc37 C terminal domain
PF08565 1 CDC37_M Cdc37 Hsp90 binding domain
PF08566 1 Pam17 Mitochondrial import protein Pam17
PF08567 1 PH_TFIIH TFIIH p62 subunit, N-terminal domain
PF08568 1 Kinetochor_Ybp2 Uncharacterised protein family, YAP/Alf4/glomulin
PF08569 1 Mo25 Mo25-like
PF08572 1 PRP3 pre-mRNA processing factor 3 (PRP3)
PF08573 1 SAE2 DNA repair protein endonuclease SAE2/CtIP C-terminus
PF08574 1 Iwr1 Transcription factor Iwr1
PF08577 1 PI31_Prot_C PI31 proteasome regulator
PF08578 1 DUF1765 Protein of unknown function (DUF1765)
PF08580 1 KAR9 Yeast cortical protein KAR9
PF08581 1 Tup_N Tup N-terminal
PF08583 2 Cmc1 Cytochrome c oxidase biogenesis protein Cmc1 like
PF08584 1 Ribonuc_P_40 Ribonuclease P 40kDa (Rpp40) subunit
PF08585 1 RMI1_N RecQ mediated genome instability protein
PF08587 1 UBA_2 Ubiquitin associated domain (UBA)
PF08588 1 DUF1769 Protein of unknown function (DUF1769)
PF08589 1 DUF1770 Fungal protein of unknown function (DUF1770)
PF08590 2 DUF1771 Domain of unknown function (DUF1771)
PF08591 1 RNR_inhib Ribonucleotide reductase inhibitor
PF08592 3 DUF1772 Domain of unknown function (DUF1772)
PF08593 1 DUF1773 Domain of unknown function
PF08595 1 RXT2_N RXT2-like, N-terminal
PF08596 1 Lgl_C Lethal giant larvae(Lgl) like, C-terminal
PF08597 1 eIF3_subunit Translation initiation factor eIF3 subunit
PF08598 2 Sds3 Sds3-like
PF08600 1 Rsm1 Rsm1-like
PF08601 2 PAP1 Transcription factor PAP1
PF08603 1 CAP_C Adenylate cyclase associated (CAP) C terminal
PF08606 1 Prp19 Prp19/Pso4-like
PF08608 1 Wyosine_form Wyosine base formation
PF08609 1 Fes1 Nucleotide exchange factor Fes1
PF08610 1 Pex16 Peroxisomal membrane protein (Pex16)
PF08611 1 DUF1774 Fungal protein of unknown function (DUF1774)
PF08613 6 Cyclin Cyclin
PF08614 1 ATG16 Autophagy protein 16 (ATG16)
PF08615 1 RNase_H2_suC Ribonuclease H2 non-catalytic subunit (Ylr154p-like)
PF08616 2 SPA Stabilization of polarity axis
PF08617 1 CGI-121 Kinase binding protein CGI-121
PF08618 2 Opi1 Transcription factor Opi1
PF08619 1 Nha1_C Alkali metal cation/H+ antiporter Nha1 C terminus
PF08620 1 RPAP1_C RPAP1-like, C-terminal
PF08621 1 RPAP1_N RPAP1-like, N-terminal
PF08622 1 Svf1 Svf1-like N-terminal lipocalin domain
PF08623 1 TIP120 TATA-binding protein interacting (TIP20)
PF08624 2 CRC_subunit Chromatin remodelling complex Rsc7/Swp82 subunit
PF08625 1 Utp13 Utp13 specific WD40 associated domain
PF08626 1 TRAPPC9-Trs120 Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit
PF08627 1 CRT-like CRT-like, chloroquine-resistance transporter-like
PF08628 2 Nexin_C Sorting nexin C terminal
PF08630 1 Dfp1_Him1_M Dfp1/Him1, central region
PF08631 1 SPO22 Meiosis protein SPO22/ZIP4 like
PF08632 1 Zds_C Activator of mitotic machinery Cdc14 phosphatase activation C-term
PF08633 1 Rox3 Rox3 mediator complex subunit
PF08634 1 Pet127 Mitochondrial protein Pet127
PF08636 1 Pkr1 ER protein Pkr1
PF08637 1 NCA2 ATP synthase regulation protein NCA2
PF08638 1 Med14 Mediator complex subunit MED14
PF08639 1 SLD3 DNA replication regulator SLD3
PF08640 1 U3_assoc_6 U3 small nucleolar RNA-associated protein 6
PF08641 1 Mis14 Kinetochore protein Mis14 like
PF08642 1 Rxt3 Histone deacetylation protein Rxt3
PF08643 1 DUF1776 Fungal family of unknown function (DUF1776)
PF08644 2 SPT16 FACT complex subunit (SPT16/CDC68)
PF08645 1 PNK3P Polynucleotide kinase 3 phosphatase
PF08646 1 Rep_fac-A_C Replication factor-A C terminal domain
PF08647 1 BRE1 BRE1 E3 ubiquitin ligase
PF08648 1 SNRNP27 U4/U6.U5 small nuclear ribonucleoproteins
PF08649 1 DASH_Dad1 DASH complex subunit Dad1
PF08650 1 DASH_Dad4 DASH complex subunit Dad4
PF08651 1 DASH_Duo1 DASH complex subunit Duo1
PF08652 1 RAI1 RAI1 like PD-(D/E)XK nuclease
PF08653 1 DASH_Dam1 DASH complex subunit Dam1
PF08654 1 DASH_Dad2 DASH complex subunit Dad2
PF08655 1 DASH_Ask1 DASH complex subunit Ask1
PF08656 1 DASH_Dad3 DASH complex subunit Dad3
PF08657 2 DASH_Spc34 DASH complex subunit Spc34
PF08658 1 Rad54_N Rad54 N terminal
PF08659 47 KR KR domain
PF08660 1 Alg14 Oligosaccharide biosynthesis protein Alg14 like
PF08661 1 Rep_fac-A_3 Replication factor A protein 3
PF08662 4 eIF2A Eukaryotic translation initiation factor eIF2A
PF08668 1 HDOD HDOD domain
PF08669 1 GCV_T_C Glycine cleavage T-protein C-terminal barrel domain
PF08672 1 ANAPC2 Anaphase promoting complex (APC) subunit 2
PF08676 2 MutL_C MutL C terminal dimerisation domain
PF08689 1 Med5 Mediator complex subunit Med5
PF08690 1 GET2 GET complex subunit GET2
PF08695 1 Coa1 Cytochrome oxidase complex assembly protein 1
PF08696 1 Dna2 DNA replication factor Dna2
PF08698 1 Fcf2 Fcf2 pre-rRNA processing
PF08699 2 ArgoL1 Argonaute linker 1 domain
PF08700 3 Vps51 Vps51/Vps67
PF08701 1 GN3L_Grn1 GNL3L/Grn1 putative GTPase
PF08704 2 GCD14 tRNA methyltransferase complex GCD14 subunit
PF08711 3 Med26 TFIIS helical bundle-like domain
PF08712 1 Nfu_N Scaffold protein Nfu/NifU N terminal
PF08718 1 GLTP Glycolipid transfer protein (GLTP)
PF08726 2 EFhand_Ca_insen Ca2+ insensitive EF hand
PF08728 1 CRT10 CRT10
PF08729 1 HUN HPC2 and ubinuclein domain
PF08733 1 PalH PalH/RIM21
PF08737 1 Rgp1 Rgp1
PF08738 1 Gon7 Gon7 family
PF08740 1 BCS1_N BCS1 N terminal
PF08743 1 Nse4_C Nse4 C-terminal
PF08746 1 zf-RING-like RING-like domain
PF08752 1 COP-gamma_platf Coatomer gamma subunit appendage platform subdomain
PF08755 1 YccV-like Hemimethylated DNA-binding protein YccV like
PF08760 1 DUF1793 Domain of unknown function (DUF1793)
PF08766 3 DEK_C DEK C terminal domain
PF08767 1 CRM1_C CRM1 C terminal
PF08771 1 FRB_dom FKBP12-rapamycin binding domain
PF08772 1 NOB1_Zn_bind Nin one binding (NOB1) Zn-ribbon like
PF08774 1 VRR_NUC VRR-NUC domain
PF08783 1 DWNN DWNN domain
PF08784 1 RPA_C Replication protein A C terminal
PF08785 1 Ku_PK_bind Ku C terminal domain like
PF08790 1 zf-LYAR LYAR-type C2HC zinc finger
PF08797 1 HIRAN HIRAN domain
PF08799 2 PRP4 pre-mRNA processing factor 4 (PRP4) like
PF08801 2 Nucleoporin_N Nup133 N terminal like
PF08825 1 E2_bind E2 binding domain
PF08839 1 CDT1 DNA replication factor CDT1 like
PF08840 2 BAAT_C BAAT / Acyl-CoA thioester hydrolase C terminal
PF08880 1 QLQ QLQ
PF08914 1 Myb_DNA-bind_2 Rap1 Myb domain
PF08920 1 SF3b1 Splicing factor 3B subunit 1
PF08938 1 HBS1_N HBS1 N-terminus
PF08939 1 DUF1917 Domain of unknown function (DUF1917)
PF08953 1 DUF1899 Domain of unknown function (DUF1899)
PF08969 1 USP8_dimer USP8 dimerisation domain
PF08991 1 MTCP1 Mature-T-Cell Proliferation I type
PF08996 1 zf-DNA_Pol DNA Polymerase alpha zinc finger
PF09011 6 HMG_box_2 HMG-box domain
PF09044 1 Kp4 Kp4
PF09056 1 Phospholip_A2_3 Prokaryotic phospholipase A2
PF09070 1 PFU PFU (PLAA family ubiquitin binding)
PF09072 1 TMA7 Translation machinery associated TMA7
PF09084 1 NMT1 NMT1/THI5 like
PF09088 1 MIF4G_like MIF4G like
PF09090 1 MIF4G_like_2 MIF4G like
PF09110 1 HAND HAND
PF09111 1 SLIDE SLIDE
PF09118 1 DUF1929 Domain of unknown function (DUF1929)
PF09127 1 Leuk-A4-hydro_C Leukotriene A4 hydrolase, C-terminal
PF09130 1 DUF1932 Domain of unknown function (DUF1932)
PF09138 1 Urm1 Urm1 (Ubiquitin related modifier)
PF09139 1 Tam41_Mmp37 Phosphatidate cytidylyltransferase, mitochondrial
PF09140 1 MipZ ATPase MipZ
PF09173 1 eIF2_C Initiation factor eIF2 gamma, C terminal
PF09174 1 Maf1 Maf1 regulator
PF09177 1 Syntaxin-6_N Syntaxin 6, N-terminal
PF09180 1 ProRS-C_1 Prolyl-tRNA synthetase, C-terminal
PF09184 1 PPP4R2 PPP4R2
PF09202 1 Rio2_N Rio2, N-terminal
PF09229 1 Aha1_N Activator of Hsp90 ATPase, N-terminal
PF09243 2 Rsm22 Mitochondrial small ribosomal subunit Rsm22
PF09248 1 DUF1965 Domain of unknown function (DUF1965)
PF09261 1 Alpha-mann_mid Alpha mannosidase middle domain
PF09262 1 PEX-1N Peroxisome biogenesis factor 1, N-terminal
PF09273 1 Rubis-subs-bind Rubisco LSMT substrate-binding
PF09280 1 XPC-binding XPC-binding domain
PF09282 1 Mago-bind Mago binding
PF09286 1 Pro-kuma_activ Pro-kumamolisin, activation domain
PF09295 1 ChAPs ChAPs (Chs5p-Arf1p-binding proteins)
PF09296 1 NUDIX-like NADH pyrophosphatase-like rudimentary NUDIX domain
PF09297 1 zf-NADH-PPase NADH pyrophosphatase zinc ribbon domain
PF09298 2 FAA_hydrolase_N Fumarylacetoacetase N-terminal
PF09302 1 XLF XLF-Cernunnos, XRcc4-like factor, NHEJ component
PF09320 1 DUF1977 Domain of unknown function (DUF1977)
PF09324 1 DUF1981 Domain of unknown function (DUF1981)
PF09325 3 Vps5 Vps5 C terminal like
PF09326 1 NADH_dhqG_C NADH-ubiquinone oxidoreductase subunit G, C-terminal
PF09329 1 zf-primase Primase zinc finger
PF09333 2 ATG_C Autophagy-related protein C terminal domain
PF09334 7 tRNA-synt_1g tRNA synthetases class I (M)
PF09335 1 SNARE_assoc SNARE associated Golgi protein
PF09336 3 Vps4_C Vps4 C terminal oligomerisation domain
PF09340 1 NuA4 Histone acetyltransferase subunit NuA4
PF09341 1 Pcc1 Transcription factor Pcc1
PF09346 1 SMI1_KNR4 SMI1 / KNR4 family (SUKH-1)
PF09347 1 DUF1989 Domain of unknown function (DUF1989)
PF09349 1 OHCU_decarbox OHCU decarboxylase
PF09350 1 DUF1992 Domain of unknown function (DUF1992)
PF09351 1 DUF1993 Domain of unknown function (DUF1993)
PF09358 1 E1_UFD Ubiquitin fold domain
PF09359 2 VTC VTC domain
PF09362 2 DUF1996 Domain of unknown function (DUF1996)
PF09368 1 Sas10 Sas10 C-terminal domain
PF09369 1 DUF1998 Domain of unknown function (DUF1998)
PF09370 1 PEP_hydrolase Phosphoenolpyruvate hydrolase-like
PF09377 1 SBDS_C SBDS protein C-terminal domain
PF09382 1 RQC RQC domain
PF09384 1 UTP15_C UTP15 C terminal
PF09402 1 MSC Man1-Src1p-C-terminal domain
PF09405 1 Btz CASC3/Barentsz eIF4AIII binding
PF09414 3 RNA_ligase RNA ligase
PF09415 1 CENP-X CENP-S associating Centromere protein X
PF09416 1 UPF1_Zn_bind RNA helicase (UPF2 interacting domain)
PF09419 1 PGP_phosphatase Mitochondrial PGP phosphatase
PF09420 1 Nop16 Ribosome biogenesis protein Nop16
PF09421 1 FRQ Frequency clock protein
PF09423 2 PhoD PhoD-like phosphatase
PF09424 1 YqeY Yqey-like protein
PF09427 1 DUF2014 Domain of unknown function (DUF2014)
PF09429 1 Wbp11 WW domain binding protein 11
PF09430 1 DUF2012 Protein of unknown function (DUF2012)
PF09431 1 DUF2013 Protein of unknown function (DUF2013)
PF09435 1 DUF2015 Fungal protein of unknown function (DUF2015)
PF09439 8 SRPRB Signal recognition particle receptor beta subunit
PF09440 1 eIF3_N eIF3 subunit 6 N terminal domain
PF09441 1 Abp2 ARS binding protein 2
PF09444 1 MRC1 MRC1-like domain
PF09445 2 Methyltransf_15 RNA cap guanine-N2 methyltransferase
PF09446 1 VMA21 VMA21-like domain
PF09447 1 Cnl2_NKP2 Cnl2/NKP2 family protein
PF09451 2 ATG27 Autophagy-related protein 27
PF09453 1 HIRA_B HIRA B motif
PF09454 1 Vps23_core Vps23 core domain
PF09462 1 Mus7 Mus7/MMS22 family
PF09463 1 Opy2 Opy2 protein
PF09468 1 RNase_H2-Ydr279 Ydr279p protein family (RNase H2 complex component) wHTH domain
PF09494 1 Slx4 Slx4 endonuclease
PF09495 1 DUF2462 Protein of unknown function (DUF2462)
PF09496 1 CENP-O Cenp-O kinetochore centromere component
PF09497 1 Med12 Transcription mediator complex subunit Med12
PF09507 1 CDC27 DNA polymerase subunit Cdc27
PF09511 1 RNA_lig_T4_1 RNA ligase
PF09531 2 Ndc1_Nup Nucleoporin protein Ndc1-Nup
PF09532 2 FDF FDF domain
PF09597 1 IGR IGR protein motif
PF09598 1 Stm1_N Stm1
PF09637 1 Med18 Med18 protein
PF09649 1 CHZ Histone chaperone domain CHZ
PF09668 1 Asp_protease Aspartyl protease
PF09692 1 Arb1 Argonaute siRNA chaperone (ARC) complex subunit Arb1
PF09696 1 Ctf8 Ctf8
PF09724 1 Dcc1 Sister chromatid cohesion protein Dcc1
PF09728 1 Taxilin Myosin-like coiled-coil protein
PF09729 3 Gti1_Pac2 Gti1/Pac2 family
PF09731 2 Mitofilin Mitochondrial inner membrane protein
PF09732 1 CactinC_cactus Cactus-binding C-terminus of cactin protein
PF09733 1 VEFS-Box VEFS-Box of polycomb protein
PF09734 1 Tau95 RNA polymerase III transcription factor (TF)IIIC subunit HTH domain
PF09736 1 Bud13 Pre-mRNA-splicing factor of RES complex
PF09742 1 Dymeclin Dyggve-Melchior-Clausen syndrome protein
PF09745 1 DUF2040 Coiled-coil domain-containing protein 55 (DUF2040)
PF09747 1 DUF2052 Coiled-coil domain containing protein (DUF2052)
PF09748 1 Med10 Transcription factor subunit Med10 of Mediator complex
PF09749 1 HVSL Uncharacterised conserved protein
PF09751 1 Es2 Nuclear protein Es2
PF09757 1 Arb2 Arb2 domain
PF09759 1 Atx10homo_assoc Spinocerebellar ataxia type 10 protein domain
PF09763 1 Sec3_C Exocyst complex component Sec3
PF09766 1 FmiP_Thoc5 Fms-interacting protein/Thoc5
PF09768 1 Peptidase_M76 Peptidase M76 family
PF09769 1 ApoO Apolipoprotein O
PF09770 1 PAT1 Topoisomerase II-associated protein PAT1
PF09774 1 Cid2 Caffeine-induced death protein 2
PF09779 1 Ima1_N Ima1 N-terminal domain
PF09783 1 Vac_ImportDeg Vacuolar import and degradation protein
PF09784 1 L31 Mitochondrial ribosomal protein L31
PF09785 1 Prp31_C Prp31 C terminal domain
PF09791 1 Oxidored-like Oxidoreductase-like protein, N-terminal
PF09792 1 But2 Ubiquitin 3 binding protein But2 C-terminal domain
PF09794 1 Avl9 Transport protein Avl9
PF09796 1 QCR10 Ubiquinol-cytochrome-c reductase complex subunit (QCR10)
PF09797 1 NatB_MDM20 N-acetyltransferase B complex (NatB) non catalytic subunit
PF09801 1 SYS1 Integral membrane protein S linking to the trans Golgi network
PF09802 1 Sec66 Preprotein translocase subunit Sec66
PF09803 1 Pet100 Pet100
PF09804 1 DUF2347 Uncharacterized conserved protein (DUF2347)
PF09805 1 Nop25 Nucleolar protein 12 (25kDa)
PF09809 1 MRP-L27 Mitochondrial ribosomal protein L27
PF09810 1 Exo5 Exonuclease V - a 5' deoxyribonuclease
PF09811 2 Yae1_N Essential protein Yae1, N terminal
PF09813 1 Coiled-coil_56 Coiled-coil domain-containing protein 56
PF09814 1 HECT_2 HECT-like Ubiquitin-conjugating enzyme (E2)-binding
PF09816 1 EAF RNA polymerase II transcription elongation factor
PF09825 1 BPL_N Biotin-protein ligase, N terminal
PF09830 1 ATP_transf ATP adenylyltransferase
PF09848 1 DUF2075 Uncharacterized conserved protein (DUF2075)
PF09924 1 DUF2156 Uncharacterised conserved protein (DUF2156)
PF09949 1 DUF2183 Uncharacterized conserved protein (DUF2183)
PF09994 2 DUF2235 Uncharacterized alpha/beta hydrolase domain (DUF2235)
PF09995 2 DUF2236 Uncharacterized protein conserved in bacteria (DUF2236)
PF10000 1 ACT_3 ACT domain
PF10017 2 Methyltransf_33 Histidine-specific methyltransferase, SAM-dependent
PF10018 1 Med4 Vitamin-D-receptor interacting Mediator subunit 4
PF10021 2 DUF2263 Uncharacterized protein conserved in bacteria (DUF2263)
PF10032 1 Pho88 Phosphate transport (Pho88)
PF10033 1 ATG13 Autophagy-related protein 13
PF10056 1 DUF2293 Uncharacterized conserved protein (DUF2293)
PF10058 1 zinc_ribbon_10 Predicted integral membrane zinc-ribbon metal-binding protein
PF10075 2 CSN8_PSD8_EIF3K CSN8/PSMD8/EIF3K family
PF10096 1 DUF2334 Uncharacterized protein conserved in bacteria (DUF2334)
PF10104 1 Brr6_like_C_C Di-sulfide bridge nucleocytoplasmic transport domain
PF10153 1 Efg1 rRNA-processing protein Efg1
PF10156 1 Med17 Subunit 17 of Mediator complex
PF10159 1 MMtag Multiple myeloma tumor-associated
PF10165 1 Ric8 Guanine nucleotide exchange factor synembryn
PF10173 1 Mit_KHE1 Mitochondrial K+-H+ exchange-related
PF10176 1 DUF2370 Protein of unknown function (DUF2370)
PF10178 1 PAC3 Proteasome assembly chaperone 3
PF10180 1 DUF2373 Uncharacterised conserved protein (DUF2373)
PF10181 1 PIG-H GPI-GlcNAc transferase complex, PIG-H component
PF10186 1 Atg14 Vacuolar sorting 38 and autophagy-related subunit 14
PF10187 1 Nefa_Nip30_N N-terminal domain of NEFA-interacting nuclear protein NIP30
PF10190 1 Tmemb_170 Putative transmembrane protein 170
PF10193 1 Telomere_reg-2 Telomere length regulation protein
PF10197 2 Cir_N N-terminal domain of CBF1 interacting co-repressor CIR
PF10198 1 Ada3 Histone acetyltransferases subunit 3
PF10199 1 Adaptin_binding Alpha and gamma adaptin binding protein p34
PF10203 1 Pet191_N Cytochrome c oxidase assembly protein PET191
PF10213 1 MRP-S28 Mitochondrial ribosomal subunit protein
PF10214 1 Rrn6 RNA polymerase I-specific transcription-initiation factor
PF10224 1 DUF2205 Short coiled-coil protein
PF10230 1 LIDHydrolase Lipid-droplet associated hydrolase
PF10232 1 Med8 Mediator of RNA polymerase II transcription complex subunit 8
PF10233 2 Cg6151-P Uncharacterized conserved protein CG6151-P
PF10235 1 Cript Microtubule-associated protein CRIPT
PF10236 1 DAP3 Mitochondrial ribosomal death-associated protein 3
PF10241 1 KxDL Uncharacterized conserved protein
PF10247 1 Romo1 Reactive mitochondrial oxygen species modulator 1
PF10252 1 PP28 Casein kinase substrate phosphoprotein PP28
PF10253 1 PRCC Mitotic checkpoint regulator, MAD2B-interacting
PF10255 1 Paf67 RNA polymerase I-associated factor PAF67
PF10256 1 Erf4 Golgin subfamily A member 7/ERF4 family
PF10257 1 RAI16-like Retinoic acid induced 16-like protein
PF10259 1 Rogdi_lz Rogdi leucine zipper containing protein
PF10261 1 Scs3p Inositol phospholipid synthesis and fat-storage-inducing TM
PF10262 1 Rdx Rdx family
PF10263 2 SprT-like SprT-like family
PF10270 1 MMgT Membrane magnesium transporter
PF10273 1 WGG Pre-rRNA-processing protein TSR2
PF10274 1 ParcG Parkin co-regulated protein
PF10275 1 Peptidase_C65 Peptidase C65 Otubain
PF10276 1 zf-CHCC Zinc-finger domain
PF10277 2 Frag1 Frag1/DRAM/Sfk1 family
PF10280 1 Med11 Mediator complex protein
PF10281 4 Ish1 Putative stress-responsive nuclear envelope protein
PF10282 2 Lactonase Lactonase, 7-bladed beta-propeller
PF10287 1 DUF2401 Putative TOS1-like glycosyl hydrolase (DUF2401)
PF10288 1 CTU2 Cytoplasmic tRNA 2-thiolation protein 2
PF10290 1 DUF2403 Glycine-rich protein domain (DUF2403)
PF10291 1 muHD Muniscin C-terminal mu homology domain
PF10293 1 DUF2405 Domain of unknown function (DUF2405)
PF10294 5 Methyltransf_16 Lysine methyltransferase
PF10295 1 DUF2406 Uncharacterised protein (DUF2406)
PF10296 3 MMM1 Maintenance of mitochondrial morphology protein 1
PF10297 1 Hap4_Hap_bind Minimal binding motif of Hap4 for binding to Hap2/3/5
PF10300 1 DUF3808 Protein of unknown function (DUF3808)
PF10302 1 DUF2407 DUF2407 ubiquitin-like domain
PF10303 1 DUF2408 Protein of unknown function (DUF2408)
PF10304 1 RTP1_C2 Required for nuclear transport of RNA pol II C-terminus 2
PF10305 1 Fmp27_SW RNA pol II promoter Fmp27 protein domain
PF10306 1 FLILHELTA Hypothetical protein FLILHELTA
PF10307 1 HAD_SAK_1 HAD domain family 1 in Swiss Army Knife RNA repair proteins
PF10309 1 NCBP3 Nuclear cap-binding protein subunit 3
PF10310 1 DUF5427 Family of unknown function (DUF5427)
PF10311 1 Ilm1 Increased loss of mitochondrial DNA protein 1
PF10312 1 Cactin_mid Conserved mid region of cactin
PF10313 1 DUF2415 Uncharacterised protein domain (DUF2415)
PF10329 1 DUF2417 Region of unknown function (DUF2417)
PF10330 1 Stb3 Putative Sin3 binding protein
PF10332 1 DUF2418 Protein of unknown function (DUF2418)
PF10333 1 Pga1 GPI-Mannosyltransferase II co-activator
PF10334 1 ArAE_2 Aromatic acid exporter family member 2
PF10337 2 ArAE_2_N Putative ER transporter, 6TM, N-terminal
PF10338 1 DUF2423 Protein of unknown function (DUF2423)
PF10340 3 Say1_Mug180 Steryl acetyl hydrolase
PF10342 2 GPI-anchored Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family
PF10343 1 Q_salvage Potential Queuosine, Q, salvage protein family
PF10344 1 Fmp27 Mitochondrial protein from FMP27
PF10345 1 Cohesin_load Cohesin loading factor
PF10347 1 Fmp27_GFWDK RNA pol II promoter Fmp27 protein domain
PF10348 2 DUF2427 Domain of unknown function (DUF2427)
PF10350 2 DUF2428 Putative death-receptor fusion protein (DUF2428)
PF10351 1 Apt1 Golgi-body localisation protein domain
PF10354 1 DUF2431 Domain of unknown function (DUF2431)
PF10355 2 Ytp1 Protein of unknown function (Ytp1)
PF10356 2 DUF2034 Protein of unknown function (DUF2034)
PF10357 1 Kin17_mid Domain of Kin17 curved DNA-binding protein
PF10358 1 NT-C2 N-terminal C2 in EEIG1 and EHBP1 proteins
PF10359 1 Fmp27_WPPW RNA pol II promoter Fmp27 protein domain
PF10360 1 DUF2433 Protein of unknown function (DUF2433)
PF10361 1 DUF2434 Protein of unknown function (DUF2434)
PF10363 1 RTP1_C1 Required for nuclear transport of RNA pol II C-terminus 1
PF10366 1 Vps39_1 Vacuolar sorting protein 39 domain 1
PF10367 2 Vps39_2 Vacuolar sorting protein 39 domain 2
PF10369 1 ALS_ss_C Small subunit of acetolactate synthase
PF10373 2 EST1_DNA_bind Est1 DNA/RNA binding domain
PF10374 1 EST1 Telomerase activating protein Est1
PF10375 1 GRAB GRIP-related Arf-binding domain
PF10377 1 ATG11 Autophagy-related protein 11
PF10378 1 RRM Putative RRM domain
PF10381 1 Autophagy_C Autophagocytosis associated protein C-terminal
PF10382 1 DUF2439 Protein of unknown function (DUF2439)
PF10383 1 Clr2 Transcription-silencing protein Clr2
PF10384 1 Scm3 Centromere protein Scm3
PF10391 1 DNA_pol_lambd_f Fingers domain of DNA polymerase lambda
PF10392 1 COG5 Golgi transport complex subunit 5
PF10394 1 Hat1_N Histone acetyl transferase HAT1 N-terminus
PF10395 1 Utp8 Utp8 family
PF10396 1 TrmE_N GTP-binding protein TrmE N-terminus
PF10397 1 ADSL_C Adenylosuccinate lyase C-terminus
PF10403 2 BHD_1 Rad4 beta-hairpin domain 1
PF10404 2 BHD_2 Rad4 beta-hairpin domain 2
PF10405 2 BHD_3 Rad4 beta-hairpin domain 3
PF10406 1 TAF8_C Transcription factor TFIID complex subunit 8 C-term
PF10408 1 Ufd2P_core Ubiquitin elongating factor core
PF10415 1 FumaraseC_C Fumarase C C-terminus
PF10417 1 1-cysPrx_C C-terminal domain of 1-Cys peroxiredoxin
PF10419 1 TFIIIC_sub6 TFIIIC subunit triple barrel domain
PF10428 2 SOG2 RAM signalling pathway protein
PF10431 3 ClpB_D2-small C-terminal, D2-small domain, of ClpB protein
PF10433 4 MMS1_N Mono-functional DNA-alkylating methyl methanesulfonate N-term
PF10435 1 BetaGal_dom2 Beta-galactosidase, domain 2
PF10436 3 BCDHK_Adom3 Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase
PF10441 1 Urb2 Urb2/Npa2 family
PF10443 2 RNA12 RNA12 protein
PF10444 1 Nbl1_Borealin_N Nbl1 / Borealin N terminal
PF10445 1 DUF2456 Protein of unknown function (DUF2456)
PF10446 1 DUF2457 Protein of unknown function (DUF2457)
PF10447 2 EXOSC1 Exosome component EXOSC1/CSL4
PF10451 1 Stn1 Telomere regulation protein Stn1
PF10452 1 TCO89 TORC1 subunit TCO89
PF10453 1 NUFIP1 Nuclear fragile X mental retardation-interacting protein 1 (NUFIP1)
PF10455 2 BAR_2 Bin/amphiphysin/Rvs domain for vesicular trafficking
PF10469 1 AKAP7_NLS AKAP7 2'5' RNA ligase-like domain
PF10475 1 Vps54_N Vacuolar-sorting protein 54, of GARP complex
PF10483 1 Elong_Iki1 Elongator subunit Iki1
PF10487 2 Nup188 Nucleoporin subcomplex protein binding to Pom34
PF10494 1 Stk19 Serine-threonine protein kinase 19
PF10495 1 PACT_coil_coil Pericentrin-AKAP-450 domain of centrosomal targeting protein
PF10496 1 Syntaxin-18_N SNARE-complex protein Syntaxin-18 N-terminus
PF10497 1 zf-4CXXC_R1 Zinc-finger domain of monoamine-oxidase A repressor R1
PF10501 1 Ribosomal_L50 Ribosomal subunit 39S
PF10509 1 GalKase_gal_bdg Galactokinase galactose-binding signature
PF10510 1 PIG-S Phosphatidylinositol-glycan biosynthesis class S protein
PF10513 2 EPL1 Enhancer of polycomb-like
PF10516 1 SHNi-TPR SHNi-TPR
PF10521 1 Tti2 Tti2 family
PF10528 1 GLEYA GLEYA domain
PF10531 1 SLBB SLBB domain
PF10537 1 WAC_Acf1_DNA_bd ATP-utilising chromatin assembly and remodelling N-terminal
PF10540 1 Membr_traf_MHD Munc13 (mammalian uncoordinated) homology domain
PF10544 1 T5orf172 T5orf172 domain
PF10551 1 MULE MULE transposase domain
PF10557 3 Cullin_Nedd8 Cullin protein neddylation domain
PF10558 1 MTP18 Mitochondrial 18 KDa protein (MTP18)
PF10559 1 Plug_translocon Plug domain of Sec61p
PF10568 2 Tom37 Outer mitochondrial membrane transport complex protein
PF10584 7 Proteasome_A_N Proteasome subunit A N-terminal signature
PF10585 2 UBA_e1_thiolCys Ubiquitin-activating enzyme active site
PF10587 1 EF-1_beta_acid Eukaryotic elongation factor 1 beta central acidic region
PF10588 1 NADH-G_4Fe-4S_3 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
PF10589 1 NADH_4Fe-4S NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
PF10590 1 PNP_phzG_C Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region
PF10596 1 U6-snRNA_bdg U6-snRNA interacting domain of PrP8
PF10597 1 U5_2-snRNA_bdg U5-snRNA binding site 2 of PrP8
PF10598 1 RRM_4 RNA recognition motif of the spliceosomal PrP8
PF10601 1 zf-LITAF-like LITAF-like zinc ribbon domain
PF10602 2 RPN7 26S proteasome subunit RPN7
PF10607 4 CLTH CTLH/CRA C-terminal to LisH motif domain
PF10609 3 ParA NUBPL iron-transfer P-loop NTPase
PF10615 1 DUF2470 Protein of unknown function (DUF2470)
PF10637 1 Ofd1_CTDD Oxoglutarate and iron-dependent oxygenase degradation C-term
PF10639 1 TMEM234 Putative transmembrane family 234
PF10644 1 Misat_Tub_SegII Misato Segment II tubulin-like domain
PF10680 1 RRN9 RNA polymerase I specific transcription initiation factor
PF10744 1 Med1 Mediator of RNA polymerase II transcription subunit 1
PF10775 1 ATP_sub_h ATP synthase complex subunit h
PF10780 1 MRP_L53 39S ribosomal protein L53/MRP-L53
PF10937 1 S36_mt Ribosomal protein S36, mitochondrial
PF10996 2 Beta-Casp Beta-Casp domain
PF10998 1 DUF2838 Protein of unknown function (DUF2838)
PF11001 1 DUF2841 Protein of unknown function (DUF2841)
PF11022 1 ATP19 ATP synthase subunit K
PF11034 2 Grg1 Glucose-repressible protein Grg1
PF11160 1 Hva1_TUDOR Hypervirulence associated proteins TUDOR domain
PF11176 1 Tma16 Translation machinery-associated protein 16
PF11204 2 DUF2985 Protein of unknown function (DUF2985)
PF11221 1 Med21 Subunit 21 of Mediator complex
PF11262 1 Tho2 Transcription factor/nuclear export subunit protein 2
PF11274 1 DUF3074 Protein of unknown function (DUF3074)
PF11312 1 Methyltransf_34 Putative SAM-dependent methyltransferase
PF11326 1 DUF3128 Protein of unknown function (DUF3128)
PF11327 3 Egh16-like Egh16-like virulence factor
PF11338 1 DUF3140 Protein of unknown function (DUF3140)
PF11374 2 DUF3176 Protein of unknown function (DUF3176)
PF11416 1 Syntaxin-5_N Syntaxin-5 N-terminal, Sly1p-binding domain
PF11464 1 Rbsn Rabenosyn Rab binding domain
PF11470 1 TUG-UBL1 TUG ubiquitin-like domain
PF11489 1 Aim21 Altered inheritance of mitochondria protein 21
PF11496 1 HDA2-3 Class II histone deacetylase complex subunits 2 and 3
PF11500 1 Cut12 Spindle pole body formation-associated protein
PF11522 1 Pik1 Yeast phosphatidylinositol-4-OH kinase Pik1
PF11559 1 ADIP Afadin- and alpha -actinin-Binding
PF11563 1 Protoglobin Protoglobin
PF11566 1 PI31_Prot_N PI31 proteasome regulator N-terminal
PF11578 1 DUF3237 Protein of unknown function (DUF3237)
PF11597 1 Med13_N Mediator complex subunit 13 N-terminal
PF11605 1 Vps36_ESCRT-II Vacuolar protein sorting protein 36 Vps36
PF11626 1 Rap1_C TRF2-interacting telomeric protein/Rap1 - C terminal domain
PF11635 1 Med16 Mediator complex subunit 16
PF11640 1 TAN Telomere-length maintenance and DNA damage repair
PF11698 1 V-ATPase_H_C V-ATPase subunit H
PF11699 1 CENP-C_C Mif2/CENP-C like
PF11700 2 ATG22 Vacuole effluxer Atg22 like
PF11701 1 UNC45-central Myosin-binding striated muscle assembly central
PF11702 2 DUF3295 Protein of unknown function (DUF3295)
PF11704 1 Folliculin Vesicle coat protein involved in Golgi to plasma membrane transport
PF11705 1 RNA_pol_3_Rpc31 DNA-directed RNA polymerase III subunit Rpc31
PF11707 1 Npa1 Ribosome 60S biogenesis N-terminal
PF11708 1 Slu7 Pre-mRNA splicing Prp18-interacting factor
PF11709 1 Mit_ribos_Mrp51 Mitochondrial ribosomal protein subunit
PF11710 4 Git3 G protein-coupled glucose receptor regulating Gpa2
PF11711 1 Tim54 Inner membrane protein import complex subunit Tim54
PF11712 1 Vma12 Endoplasmic reticulum-based factor for assembly of V-ATPase
PF11715 2 Nup160 Nucleoporin Nup120/160
PF11717 2 Tudor-knot RNA binding activity-knot of a chromodomain
PF11718 1 CPSF73-100_C Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term
PF11719 1 Drc1-Sld2 DNA replication and checkpoint protein
PF11720 1 Inhibitor_I78 Peptidase inhibitor I78 family
PF11732 1 Thoc2 Transcription- and export-related complex subunit
PF11735 1 CAP59_mtransfer Cryptococcal mannosyltransferase 1
PF11754 8 Velvet Velvet factor
PF11764 1 N-SET COMPASS (Complex proteins associated with Set1p) component N
PF11767 1 SET_assoc Histone lysine methyltransferase SET associated
PF11779 1 SPT_ssu-like Small subunit of serine palmitoyltransferase-like
PF11781 1 zf-RRN7 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7
PF11785 1 Aft1_OSA Aft1 osmotic stress response (OSM) domain
PF11786 1 Aft1_HRA Aft1 HRA domain
PF11787 1 Aft1_HRR Aft1 HRR domain
PF11788 1 MRP-L46 39S mitochondrial ribosomal protein L46
PF11789 1 zf-Nse Zinc-finger of the MIZ type in Nse subunit
PF11790 1 Glyco_hydro_cc Glycosyl hydrolase catalytic core
PF11793 1 FANCL_C FANCL C-terminal domain
PF11798 1 IMS_HHH IMS family HHH motif
PF11799 4 IMS_C impB/mucB/samB family C-terminal domain
PF11807 4 DUF3328 Domain of unknown function (DUF3328)
PF11815 3 DUF3336 Domain of unknown function (DUF3336)
PF11816 1 DUF3337 Domain of unknown function (DUF3337)
PF11817 1 Foie-gras_1 Foie gras liver health family 1
PF11831 1 Myb_Cef pre-mRNA splicing factor component
PF11838 2 ERAP1_C ERAP1-like C-terminal domain
PF11841 1 DUF3361 Domain of unknown function (DUF3361)
PF11861 1 DUF3381 Domain of unknown function (DUF3381)
PF11864 1 DUF3384 Domain of unknown function (DUF3384)
PF11865 1 DUF3385 Domain of unknown function (DUF3385)
PF11882 2 DUF3402 Domain of unknown function (DUF3402)
PF11885 4 DUF3405 Protein of unknown function (DUF3405)
PF11894 1 Nup192 Nuclear pore complex scaffold, nucleoporins 186/192/205
PF11911 1 DUF3429 Protein of unknown function (DUF3429)
PF11915 5 DUF3433 Protein of unknown function (DUF3433)
PF11916 1 Vac14_Fig4_bd Vacuolar protein 14 C-terminal Fig4p binding
PF11919 1 DUF3437 Domain of unknown function (DUF3437)
PF11923 1 NFACT-C NFACT protein C-terminal domain
PF11927 1 DUF3445 Protein of unknown function (DUF3445)
PF11931 1 DUF3449 Domain of unknown function (DUF3449)
PF11935 1 DUF3453 Domain of unknown function (DUF3453)
PF11937 2 DUF3455 Protein of unknown function (DUF3455)
PF11942 1 Spt5_N Spt5 transcription elongation factor, acidic N-terminal
PF11951 22 Fungal_trans_2 Fungal specific transcription factor domain
PF11957 1 efThoc1 THO complex subunit 1 transcription elongation factor
PF11960 1 DUF3474 Domain of unknown function (DUF3474)
PF11968 1 Bmt2 25S rRNA (adenine(2142)-N(1))-methyltransferase, Bmt2
PF11969 4 DcpS_C Scavenger mRNA decapping enzyme C-term binding
PF11970 1 GPR_Gpa2_C G protein-coupled glucose receptor regulating Gpa2 C-term
PF11971 1 CAMSAP_CH CAMSAP CH domain
PF11976 9 Rad60-SLD Ubiquitin-2 like Rad60 SUMO-like
PF11987 2 IF-2 Translation-initiation factor 2
PF11997 1 DUF3492 Domain of unknown function (DUF3492)
PF12002 1 MgsA_C MgsA AAA+ ATPase C terminal
PF12009 1 Telomerase_RBD Telomerase ribonucleoprotein complex - RNA binding domain
PF12014 1 DUF3506 Domain of unknown function (DUF3506)
PF12030 1 DUF3517 Domain of unknown function (DUF3517)
PF12044 1 Metallopep Putative peptidase family
PF12054 1 DUF3535 Domain of unknown function (DUF3535)
PF12063 1 DUF3543 Domain of unknown function (DUF3543)
PF12066 1 DUF3546 Domain of unknown function (DUF3546)
PF12068 1 PH_RBD Rab-binding domain (RBD)
PF12074 1 Gcn1_N Generalcontrol nonderepressible 1 (Gcn1) N-terminal
PF12090 1 Spt20 Spt20 family
PF12108 1 SF3a60_bindingd Splicing factor SF3a60 binding domain
PF12110 1 Nup96 Nuclear protein 96
PF12134 1 PRP8_domainIV PRP8 domain IV core
PF12138 1 Spherulin4 Spherulation-specific family 4
PF12146 18 Hydrolase_4 Serine aminopeptidase, S33
PF12152 1 eIF_4G1 Eukaryotic translation initiation factor 4G1
PF12157 1 DUF3591 Protein of unknown function (DUF3591)
PF12171 5 zf-C2H2_jaz Zinc-finger double-stranded RNA-binding
PF12220 1 U1snRNP70_N U1 small nuclear ribonucleoprotein of 70kDa MW N terminal
PF12222 1 PNGaseA Peptide N-acetyl-beta-D-glucosaminyl asparaginase amidase A
PF12223 2 DUF3602 Protein of unknown function (DUF3602)
PF12224 3 Amidoligase_2 Putative amidoligase enzyme
PF12230 1 PRP21_like_P Pre-mRNA splicing factor PRP21 like protein
PF12231 1 Rif1_N Rap1-interacting factor 1 N terminal
PF12234 1 Rav1p_C RAVE protein 1 C terminal
PF12239 2 DUF3605 Protein of unknown function (DUF3605)
PF12243 1 CTK3 CTD kinase subunit gamma CTK3
PF12246 1 MKT1_C Temperature dependent protein affecting M2 dsRNA replication
PF12247 1 MKT1_N Temperature dependent protein affecting M2 dsRNA replication
PF12253 1 CAF1A Chromatin assembly factor 1 subunit A
PF12254 1 DNA_pol_alpha_N DNA polymerase alpha subunit p180 N terminal
PF12257 1 IML1 Vacuolar membrane-associated protein Iml1
PF12265 2 CAF1C_H4-bd Histone-binding protein RBBP4 or subunit C of CAF1 complex
PF12271 2 Chs7 Chitin synthase export chaperone
PF12273 1 RCR Chitin synthesis regulation, resistance to Congo red
PF12296 3 HsbA Hydrophobic surface binding protein A
PF12298 1 Bot1p Eukaryotic mitochondrial regulator protein
PF12311 1 DUF3632 Protein of unknown function (DUF3632)
PF12325 1 TMF_TATA_bd TATA element modulatory factor 1 TATA binding
PF12326 1 EOS1 N-glycosylation protein
PF12328 1 Rpp20 Rpp20 subunit of nuclear RNase MRP and P
PF12329 1 TMF_DNA_bd TATA element modulatory factor 1 DNA binding
PF12330 3 Haspin_kinase Haspin like kinase domain
PF12331 1 DUF3636 Protein of unknown function (DUF3636)
PF12333 1 Ipi1_N Rix1 complex component involved in 60S ribosome maturation
PF12340 3 DUF3638 Protein of unknown function (DUF3638)
PF12341 1 Mcl1_mid Minichromosome loss protein, Mcl1, middle region
PF12348 2 CLASP_N CLASP N terminal
PF12349 3 Sterol-sensing Sterol-sensing domain of SREBP cleavage-activation
PF12350 1 CTK3_C CTD kinase subunit gamma CTK3 C-terminus
PF12351 1 Fig1 Ca2+ regulator and membrane fusion protein Fig1
PF12352 3 V-SNARE_C Snare region anchored in the vesicle membrane C-terminus
PF12353 1 eIF3g Eukaryotic translation initiation factor 3 subunit G
PF12359 3 DUF3645 Protein of unknown function (DUF3645)
PF12396 8 DUF3659 Protein of unknown function (DUF3659)
PF12397 1 U3snoRNP10 U3 small nucleolar RNA-associated protein 10
PF12400 1 STIMATE STIMATE family
PF12409 1 P5-ATPase P5-type ATPase cation transporter
PF12411 1 Choline_sulf_C Choline sulfatase enzyme C terminal
PF12423 1 KIF1B Kinesin protein 1B
PF12430 1 ABA_GPCR Abscisic acid G-protein coupled receptor
PF12436 1 USP7_ICP0_bdg ICP0-binding domain of Ubiquitin-specific protease 7
PF12449 2 DUF3684 Protein of unknown function (DUF3684)
PF12451 1 VPS11_C Vacuolar protein sorting protein 11 C terminal
PF12455 1 Dynactin Dynein associated protein
PF12456 1 hSac2 Inositol phosphatase
PF12457 1 TIP_N Tuftelin interacting protein N terminal
PF12460 1 MMS19_C RNAPII transcription regulator C-terminal
PF12464 2 Mac Maltose acetyltransferase
PF12465 1 Pr_beta_C Proteasome beta subunits C terminal
PF12471 1 GTP_CH_N GTP cyclohydrolase N terminal
PF12473 1 DUF3694 Kinesin protein
PF12481 1 DUF3700 Aluminium induced protein
PF12505 2 DUF3712 Protein of unknown function (DUF3712)
PF12511 1 DUF3716 Protein of unknown function (DUF3716)
PF12513 1 SUV3_C Mitochondrial degradasome RNA helicase subunit C terminal
PF12519 1 MDM10 Mitochondrial distribution and morphology protein 10
PF12539 1 Csm1 Chromosome segregation protein Csm1/Pcs1
PF12542 1 CWC25 Pre-mRNA splicing factor
PF12550 1 GCR1_C Transcriptional activator of glycolytic enzymes
PF12569 1 NARP1 NMDA receptor-regulated protein 1
PF12572 1 DUF3752 Protein of unknown function (DUF3752)
PF12584 1 TRAPPC10 Trafficking protein particle complex subunit 10, TRAPPC10
PF12585 1 DUF3759 Protein of unknown function (DUF3759)
PF12588 1 PSDC Phophatidylserine decarboxylase
PF12589 1 WBS_methylT Methyltransferase involved in Williams-Beuren syndrome
PF12597 1 DUF3767 Protein of unknown function (DUF3767)
PF12612 1 TFCD_C Tubulin folding cofactor D C terminal
PF12619 1 MCM2_N Mini-chromosome maintenance protein 2
PF12621 3 PHM7_ext Extracellular tail, of 10TM putative phosphate transporter
PF12624 1 Chorein_N N-terminal region of Chorein or VPS13
PF12627 1 PolyA_pol_RNAbd Probable RNA and SrmB- binding site of polymerase A
PF12631 1 MnmE_helical MnmE helical domain
PF12632 1 Vezatin Mysoin-binding motif of peroxisomes
PF12656 2 G-patch_2 G-patch domain
PF12658 1 Ten1 Telomere capping, CST complex subunit
PF12660 1 zf-TFIIIC Putative zinc-finger of transcription factor IIIC complex
PF12678 5 zf-rbx1 RING-H2 zinc finger domain
PF12689 1 Acid_PPase Acid Phosphatase
PF12697 22 Abhydrolase_6 Alpha/beta hydrolase family
PF12701 1 LSM14 Scd6-like Sm domain
PF12706 5 Lactamase_B_2 Beta-lactamase superfamily domain
PF12708 8 Pectate_lyase_3 Pectate lyase superfamily protein
PF12709 1 Fungal_TACC Fungal Transforming acidic coiled-coil (TACC) proteins
PF12710 4 HAD haloacid dehalogenase-like hydrolase
PF12717 5 Cnd1 non-SMC mitotic condensation complex subunit 1
PF12718 2 Tropomyosin_1 Tropomyosin like
PF12719 1 Cnd3 Nuclear condensing complex subunits, C-term domain
PF12720 1 DUF3807 Protein of unknown function (DUF3807)
PF12722 1 Hid1 High-temperature-induced dauer-formation protein
PF12726 1 SEN1_N SEN1 N terminal
PF12735 1 Trs65 TRAPP trafficking subunit Trs65
PF12738 5 PTCB-BRCT twin BRCT domain
PF12739 1 TRAPPC-Trs85 ER-Golgi trafficking TRAPP I complex 85 kDa subunit
PF12745 1 HGTP_anticodon2 Anticodon binding domain of tRNAs
PF12751 1 Vac7 Vacuolar segregation subunit 7
PF12752 2 SUZ SUZ domain
PF12754 1 Blt1 Blt1 N-terminal domain
PF12755 1 Vac14_Fab1_bd Vacuolar 14 Fab1-binding region
PF12756 1 zf-C2H2_2 C2H2 type zinc-finger (2 copies)
PF12757 1 Eisosome1 Eisosome protein 1
PF12761 1 End3 Actin cytoskeleton-regulatory complex protein END3
PF12763 6 EF-hand_4 Cytoskeletal-regulatory complex EF hand
PF12765 1 Cohesin_HEAT HEAT repeat associated with sister chromatid cohesion
PF12766 1 Pyridox_oxase_2 Pyridoxamine 5'-phosphate oxidase
PF12767 1 SAGA-Tad1 Transcriptional regulator of RNA polII, SAGA, subunit
PF12768 1 Rax2 Cortical protein marker for cell polarity
PF12769 1 PNTB_4TM 4TM region of pyridine nucleotide transhydrogenase, mitoch
PF12774 1 AAA_6 Hydrolytic ATP binding site of dynein motor region
PF12775 1 AAA_7 P-loop containing dynein motor region
PF12776 1 Myb_DNA-bind_3 Myb/SANT-like DNA-binding domain
PF12777 1 MT Microtubule-binding stalk of dynein motor
PF12780 1 AAA_8 P-loop containing dynein motor region D4
PF12781 1 AAA_9 ATP-binding dynein motor region
PF12783 3 Sec7_N Guanine nucleotide exchange factor in Golgi transport N-terminal
PF12796 78 Ank_2 Ankyrin repeats (3 copies)
PF12799 3 LRR_4 Leucine Rich repeats (2 copies)
PF12800 1 Fer4_4 4Fe-4S binding domain
PF12804 2 NTP_transf_3 MobA-like NTP transferase domain
PF12807 1 eIF3_p135 Translation initiation factor eIF3 subunit 135
PF12808 1 Mto2_bdg Micro-tubular organiser Mto1 C-term Mto2-binding region
PF12812 2 PDZ_1 PDZ-like domain
PF12813 1 XPG_I_2 XPG domain containing
PF12814 2 Mcp5_PH Meiotic cell cortex C-terminal pleckstrin homology
PF12815 2 CTD Spt5 C-terminal nonapeptide repeat binding Spt4
PF12816 1 Vps8 Golgi CORVET complex core vacuolar protein 8
PF12821 1 ThrE_2 Threonine/Serine exporter, ThrE
PF12824 1 MRP-L20 Mitochondrial ribosomal protein subunit L20
PF12825 3 DUF3818 Domain of unknown function in PX-proteins (DUF3818)
PF12828 2 PXB PX-associated
PF12829 1 Mhr1 Transcriptional regulation of mitochondrial recombination
PF12830 1 Nipped-B_C Sister chromatid cohesion C-terminus
PF12831 3 FAD_oxidored FAD dependent oxidoreductase
PF12838 1 Fer4_7 4Fe-4S dicluster domain
PF12842 1 DUF3819 Domain of unknown function (DUF3819)
PF12848 3 ABC_tran_Xtn ABC transporter
PF12850 2 Metallophos_2 Calcineurin-like phosphoesterase superfamily domain
PF12853 1 NADH_u_ox_C C-terminal of NADH-ubiquinone oxidoreductase 21 kDa subunit
PF12854 1 PPR_1 PPR repeat
PF12855 1 Ecl1 ECL1/2/3 zinc binding proteins
PF12859 1 ANAPC1 Anaphase-promoting complex subunit 1
PF12861 5 zf-ANAPC11 Anaphase-promoting complex subunit 11 RING-H2 finger
PF12862 2 ANAPC5 Anaphase-promoting complex subunit 5
PF12867 1 DinB_2 DinB superfamily
PF12868 2 DUF3824 Domain of unknwon function (DUF3824)
PF12874 10 zf-met Zinc-finger of C2H2 type
PF12894 14 ANAPC4_WD40 Anaphase-promoting complex subunit 4 WD40 domain
PF12895 4 ANAPC3 Anaphase-promoting complex, cyclosome, subunit 3
PF12896 1 ANAPC4 Anaphase-promoting complex, cyclosome, subunit 4
PF12897 1 Aminotran_MocR Alanine-glyoxylate amino-transferase
PF12898 1 Stc1 Stc1 domain
PF12906 2 RINGv RING-variant domain
PF12917 1 HD_2 HD containing hydrolase-like enzyme
PF12921 1 ATP13 Mitochondrial ATPase expression
PF12922 1 Cnd1_N non-SMC mitotic condensation complex subunit 1, N-term
PF12923 1 RRP7 Ribosomal RNA-processing protein 7 (RRP7) C-terminal domain
PF12927 1 DUF3835 Domain of unknown function (DUF3835)
PF12928 1 tRNA_int_end_N2 tRNA-splicing endonuclease subunit sen54 N-term
PF12929 1 Mid1 Stretch-activated Ca2+-permeable channel component
PF12931 2 Sec16_C Sec23-binding domain of Sec16
PF12932 1 Sec16 Vesicle coat trafficking protein Sec16 mid-region
PF12935 1 Sec16_N Vesicle coat trafficking protein Sec16 N-terminus
PF12936 1 Kri1_C KRI1-like family C-terminal
PF12937 14 F-box-like F-box-like
PF12949 1 HeH HeH/LEM domain
PF12955 1 DUF3844 Domain of unknown function (DUF3844)
PF12998 2 ING Inhibitor of growth proteins N-terminal histone-binding
PF12999 2 PRKCSH-like Glucosidase II beta subunit-like
PF13000 3 Acatn Acetyl-coenzyme A transporter 1
PF13001 1 Ecm29 Proteasome stabiliser
PF13002 1 LDB19 Arrestin_N terminal like
PF13012 4 MitMem_reg Maintenance of mitochondrial structure and function
PF13015 1 PRKCSH_1 Glucosidase II beta subunit-like protein
PF13019 1 Sde2_N_Ubi Silencing defective 2 N-terminal ubiquitin domain
PF13023 1 HD_3 HD domain
PF13041 3 PPR_2 PPR repeat family
PF13085 1 Fer2_3 2Fe-2S iron-sulfur cluster binding domain
PF13086 11 AAA_11 AAA domain
PF13087 8 AAA_12 AAA domain
PF13091 3 PLDc_2 PLD-like domain
PF13092 1 CENP-L Kinetochore complex Sim4 subunit Fta1
PF13093 1 FTA4 Kinetochore complex Fta4 of Sim4 subunit, or CENP-50
PF13094 1 CENP-Q CENP-Q, a CENPA-CAD centromere complex subunit
PF13098 2 Thioredoxin_2 Thioredoxin-like domain
PF13127 1 DUF3955 Protein of unknown function (DUF3955)
PF13136 1 DUF3984 Protein of unknown function (DUF3984)
PF13173 1 AAA_14 AAA domain
PF13174 4 TPR_6 Tetratricopeptide repeat
PF13175 4 AAA_15 AAA ATPase domain
PF13176 11 TPR_7 Tetratricopeptide repeat
PF13177 4 DNA_pol3_delta2 DNA polymerase III, delta subunit
PF13180 1 PDZ_2 PDZ domain
PF13181 30 TPR_8 Tetratricopeptide repeat
PF13183 1 Fer4_8 4Fe-4S dicluster domain
PF13185 2 GAF_2 GAF domain
PF13187 1 Fer4_9 4Fe-4S dicluster domain
PF13191 6 AAA_16 AAA ATPase domain
PF13193 14 AMP-binding_C AMP-binding enzyme C-terminal domain
PF13202 17 EF-hand_5 EF hand
PF13207 5 AAA_17 AAA domain
PF13229 2 Beta_helix Right handed beta helix region
PF13230 3 GATase_4 Glutamine amidotransferases class-II
PF13233 5 Complex1_LYR_2 Complex1_LYR-like
PF13234 2 rRNA_proc-arch rRNA-processing arch domain
PF13236 1 CLU Clustered mitochondria
PF13237 2 Fer4_10 4Fe-4S dicluster domain
PF13238 4 AAA_18 AAA domain
PF13241 1 NAD_binding_7 Putative NAD(P)-binding
PF13242 7 Hydrolase_like HAD-hyrolase-like
PF13243 1 SQHop_cyclase_C Squalene-hopene cyclase C-terminal domain
PF13245 9 AAA_19 AAA domain
PF13246 14 Cation_ATPase Cation transport ATPase (P-type)
PF13249 1 SQHop_cyclase_N Squalene-hopene cyclase N-terminal domain
PF13254 3 DUF4045 Domain of unknown function (DUF4045)
PF13257 1 DUF4048 Domain of unknown function (DUF4048)
PF13259 1 DUF4050 Protein of unknown function (DUF4050)
PF13279 1 4HBT_2 Thioesterase-like superfamily
PF13299 1 CPSF100_C Cleavage and polyadenylation factor 2 C-terminal
PF13300 1 DUF4078 Domain of unknown function (DUF4078)
PF13302 2 Acetyltransf_3 Acetyltransferase (GNAT) domain
PF13304 2 AAA_21 AAA domain, putative AbiEii toxin, Type IV TA system
PF13307 2 Helicase_C_2 Helicase C-terminal domain
PF13323 1 HPIH N-terminal domain with HPIH motif
PF13324 1 GCIP Grap2 and cyclin-D-interacting
PF13329 1 ATG2_CAD Autophagy-related protein 2 CAD motif
PF13339 1 AATF-Che1 Apoptosis antagonizing transcription factor
PF13343 1 SBP_bac_6 Bacterial extracellular solute-binding protein
PF13344 3 Hydrolase_6 Haloacid dehalogenase-like hydrolase
PF13347 2 MFS_2 MFS/sugar transport protein
PF13350 1 Y_phosphatase3 Tyrosine phosphatase family
PF13353 1 Fer4_12 4Fe-4S single cluster domain
PF13360 1 PQQ_2 PQQ-like domain
PF13361 1 UvrD_C UvrD-like helicase C-terminal domain
PF13363 1 BetaGal_dom3 Beta-galactosidase, domain 3
PF13364 2 BetaGal_dom4_5 Beta-galactosidase jelly roll domain
PF13365 1 Trypsin_2 Trypsin-like peptidase domain
PF13369 1 Transglut_core2 Transglutaminase-like superfamily
PF13373 1 DUF2407_C DUF2407 C-terminal domain
PF13374 9 TPR_10 Tetratricopeptide repeat
PF13378 2 MR_MLE_C Enolase C-terminal domain-like
PF13380 1 CoA_binding_2 CoA binding domain
PF13385 1 Laminin_G_3 Concanavalin A-like lectin/glucanases superfamily
PF13391 3 HNH_2 HNH endonuclease
PF13393 2 tRNA-synt_His Histidyl-tRNA synthetase
PF13398 1 Peptidase_M50B Peptidase M50B-like
PF13401 5 AAA_22 AAA domain
PF13402 1 Peptidase_M60 Peptidase M60, enhancin and enhancin-like
PF13405 8 EF-hand_6 EF-hand domain
PF13409 6 GST_N_2 Glutathione S-transferase, N-terminal domain
PF13410 6 GST_C_2 Glutathione S-transferase, C-terminal domain
PF13414 6 TPR_11 TPR repeat
PF13415 8 Kelch_3 Galactose oxidase, central domain
PF13417 6 GST_N_3 Glutathione S-transferase, N-terminal domain
PF13418 15 Kelch_4 Galactose oxidase, central domain
PF13419 7 HAD_2 Haloacid dehalogenase-like hydrolase
PF13422 1 DUF4110 Domain of unknown function (DUF4110)
PF13423 14 UCH_1 Ubiquitin carboxyl-terminal hydrolase
PF13424 10 TPR_12 Tetratricopeptide repeat
PF13426 8 PAS_9 PAS domain
PF13428 3 TPR_14 Tetratricopeptide repeat
PF13430 1 DUF4112 Domain of unknown function (DUF4112)
PF13431 1 TPR_17 Tetratricopeptide repeat
PF13432 24 TPR_16 Tetratricopeptide repeat
PF13434 12 K_oxygenase L-lysine 6-monooxygenase (NADPH-requiring)
PF13439 2 Glyco_transf_4 Glycosyltransferase Family 4
PF13442 1 Cytochrome_CBB3 Cytochrome C oxidase, cbb3-type, subunit III
PF13445 15 zf-RING_UBOX RING-type zinc-finger
PF13450 35 NAD_binding_8 NAD(P)-binding Rossmann-like domain
PF13452 2 MaoC_dehydrat_N N-terminal half of MaoC dehydratase
PF13454 2 NAD_binding_9 FAD-NAD(P)-binding
PF13455 1 MUG113 Meiotically up-regulated gene 113
PF13460 16 NAD_binding_10 NAD(P)H-binding
PF13472 3 Lipase_GDSL_2 GDSL-like Lipase/Acylhydrolase family
PF13476 5 AAA_23 AAA domain
PF13481 1 AAA_25 AAA domain
PF13483 4 Lactamase_B_3 Beta-lactamase superfamily domain
PF13489 28 Methyltransf_23 Methyltransferase domain
PF13499 12 EF-hand_7 EF-hand domain pair
PF13500 1 AAA_26 AAA domain
PF13506 3 Glyco_transf_21 Glycosyl transferase family 21
PF13507 1 GATase_5 CobB/CobQ-like glutamine amidotransferase domain
PF13508 4 Acetyltransf_7 Acetyltransferase (GNAT) domain
PF13510 1 Fer2_4 2Fe-2S iron-sulfur cluster binding domain
PF13513 6 HEAT_EZ HEAT-like repeat
PF13515 3 FUSC_2 Fusaric acid resistance protein-like
PF13516 14 LRR_6 Leucine Rich repeat
PF13518 1 HTH_28 Helix-turn-helix domain
PF13519 2 VWA_2 von Willebrand factor type A domain
PF13520 23 AA_permease_2 Amino acid permease
PF13522 5 GATase_6 Glutamine amidotransferase domain
PF13523 3 Acetyltransf_8 Acetyltransferase (GNAT) domain
PF13527 2 Acetyltransf_9 Acetyltransferase (GNAT) domain
PF13531 1 SBP_bac_11 Bacterial extracellular solute-binding protein
PF13532 3 2OG-FeII_Oxy_2 2OG-Fe(II) oxygenase superfamily
PF13533 1 Biotin_lipoyl_2 Biotin-lipoyl like
PF13534 1 Fer4_17 4Fe-4S dicluster domain
PF13537 5 GATase_7 Glutamine amidotransferase domain
PF13538 1 UvrD_C_2 UvrD-like helicase C-terminal domain
PF13540 16 RCC1_2 Regulator of chromosome condensation (RCC1) repeat
PF13541 2 ChlI Subunit ChlI of Mg-chelatase
PF13549 1 ATP-grasp_5 ATP-grasp domain
PF13555 1 AAA_29 P-loop containing region of AAA domain
PF13561 43 adh_short_C2 Enoyl-(Acyl carrier protein) reductase
PF13565 1 HTH_32 Homeodomain-like domain
PF13574 1 Reprolysin_2 Metallo-peptidase family M12B Reprolysin-like
PF13578 4 Methyltransf_24 Methyltransferase domain
PF13579 2 Glyco_trans_4_4 Glycosyl transferase 4-like domain
PF13582 1 Reprolysin_3 Metallo-peptidase family M12B Reprolysin-like
PF13583 1 Reprolysin_4 Metallo-peptidase family M12B Reprolysin-like
PF13589 5 HATPase_c_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
PF13602 14 ADH_zinc_N_2 Zinc-binding dehydrogenase
PF13603 2 tRNA-synt_1_2 Leucyl-tRNA synthetase, Domain 2
PF13604 5 AAA_30 AAA domain
PF13606 36 Ank_3 Ankyrin repeat
PF13607 2 Succ_CoA_lig Succinyl-CoA ligase like flavodoxin domain
PF13614 1 AAA_31 AAA domain
PF13616 2 Rotamase_3 PPIC-type PPIASE domain
PF13621 4 Cupin_8 Cupin-like domain
PF13622 3 4HBT_3 Thioesterase-like superfamily
PF13625 1 Helicase_C_3 Helicase conserved C-terminal domain
PF13632 11 Glyco_trans_2_3 Glycosyl transferase family group 2
PF13634 7 Nucleoporin_FG Nucleoporin FG repeat region
PF13637 65 Ank_4 Ankyrin repeats (many copies)
PF13638 1 PIN_4 PIN domain
PF13639 23 zf-RING_2 Ring finger domain
PF13640 3 2OG-FeII_Oxy_3 2OG-Fe(II) oxygenase superfamily
PF13641 7 Glyco_tranf_2_3 Glycosyltransferase like family 2
PF13646 8 HEAT_2 HEAT repeats
PF13649 36 Methyltransf_25 Methyltransferase domain
PF13650 1 Asp_protease_2 Aspartyl protease
PF13656 2 RNA_pol_L_2 RNA polymerase Rpb3/Rpb11 dimerisation domain
PF13661 1 2OG-FeII_Oxy_4 2OG-Fe(II) oxygenase superfamily
PF13664 1 DUF4149 Domain of unknown function (DUF4149)
PF13668 1 Ferritin_2 Ferritin-like domain
PF13671 3 AAA_33 AAA domain
PF13672 1 PP2C_2 Protein phosphatase 2C
PF13673 12 Acetyltransf_10 Acetyltransferase (GNAT) domain
PF13679 1 Methyltransf_32 Methyltransferase domain
PF13685 2 Fe-ADH_2 Iron-containing alcohol dehydrogenase
PF13688 1 Reprolysin_5 Metallo-peptidase family M12
PF13691 1 Lactamase_B_4 tRNase Z endonuclease
PF13692 4 Glyco_trans_1_4 Glycosyl transferases group 1
PF13696 1 zf-CCHC_2 Zinc knuckle
PF13710 1 ACT_5 ACT domain
PF13714 2 PEP_mutase Phosphoenolpyruvate phosphomutase
PF13716 2 CRAL_TRIO_2 Divergent CRAL/TRIO domain
PF13718 1 GNAT_acetyltr_2 GNAT acetyltransferase 2
PF13725 1 tRNA_bind_2 Possible tRNA binding domain
PF13738 10 Pyr_redox_3 Pyridine nucleotide-disulphide oxidoreductase
PF13741 1 MRP-S25 Mitochondrial ribosomal protein S25
PF13758 1 Prefoldin_3 Prefoldin subunit
PF13768 1 VWA_3 von Willebrand factor type A domain
PF13771 2 zf-HC5HC2H PHD-like zinc-binding domain
PF13774 3 Longin Regulated-SNARE-like domain
PF13793 3 Pribosyltran_N N-terminal domain of ribose phosphate pyrophosphokinase
PF13802 2 Gal_mutarotas_2 Galactose mutarotase-like
PF13805 2 Pil1 Eisosome component PIL1
PF13812 4 PPR_3 Pentatricopeptide repeat domain
PF13813 1 MBOAT_2 Membrane bound O-acyl transferase family
PF13821 2 DUF4187 Domain of unknown function (DUF4187)
PF13824 1 zf-Mss51 Zinc-finger of mitochondrial splicing suppressor 51
PF13826 1 DUF4188 Domain of unknown function (DUF4188)
PF13831 3 PHD_2 PHD-finger
PF13832 3 zf-HC5HC2H_2 PHD-zinc-finger like domain
PF13833 13 EF-hand_8 EF-hand domain pair
PF13838 1 Clathrin_H_link Clathrin-H-link
PF13840 2 ACT_7 ACT domain
PF13844 2 Glyco_transf_41 Glycosyl transferase family 41
PF13847 22 Methyltransf_31 Methyltransferase domain
PF13848 3 Thioredoxin_6 Thioredoxin-like domain
PF13850 2 ERGIC_N Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC)
PF13854 10 Kelch_5 Kelch motif
PF13855 8 LRR_8 Leucine rich repeat
PF13857 27 Ank_5 Ankyrin repeats (many copies)
PF13862 1 BCIP p21-C-terminal region-binding protein
PF13867 1 SAP30_Sin3_bdg Sin3 binding region of histone deacetylase complex subunit SAP30
PF13869 1 NUDIX_2 Nucleotide hydrolase
PF13874 1 Nup54 Nucleoporin complex subunit 54
PF13875 1 DUF4202 Domain of unknown function (DUF4202)
PF13878 1 zf-C2H2_3 zinc-finger of acetyl-transferase ESCO
PF13881 5 Rad60-SLD_2 Ubiquitin-2 like Rad60 SUMO-like
PF13883 1 Pyrid_oxidase_2 Pyridoxamine 5'-phosphate oxidase
PF13886 1 DUF4203 Domain of unknown function (DUF4203)
PF13889 1 Chromosome_seg Chromosome segregation during meiosis
PF13892 1 DBINO DNA-binding domain
PF13893 4 RRM_5 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
PF13894 4 zf-C2H2_4 C2H2-type zinc finger
PF13899 1 Thioredoxin_7 Thioredoxin-like
PF13902 1 R3H-assoc R3H-associated N-terminal domain
PF13907 1 DUF4208 Domain of unknown function (DUF4208)
PF13911 1 AhpC-TSA_2 AhpC/TSA antioxidant enzyme
PF13912 2 zf-C2H2_6 C2H2-type zinc finger
PF13915 1 DUF4210 Domain of unknown function (DUF4210)
PF13917 3 zf-CCHC_3 Zinc knuckle
PF13919 1 ASXH Asx homology domain
PF13920 13 zf-C3HC4_3 Zinc finger, C3HC4 type (RING finger)
PF13921 7 Myb_DNA-bind_6 Myb-like DNA-binding domain
PF13923 15 zf-C3HC4_2 Zinc finger, C3HC4 type (RING finger)
PF13932 1 GIDA_assoc GidA associated domain
PF13934 1 ELYS Nuclear pore complex assembly
PF13945 1 NST1 Salt tolerance down-regulator
PF13949 1 ALIX_LYPXL_bnd ALIX V-shaped domain binding to HIV
PF13959 4 DUF4217 Domain of unknown function (DUF4217)
PF13964 2 Kelch_6 Kelch motif
PF13967 4 RSN1_TM Late exocytosis, associated with Golgi transport
PF13975 1 gag-asp_proteas gag-polyprotein putative aspartyl protease
PF14027 2 Questin_oxidase Questin oxidase-like
PF14031 1 D-ser_dehydrat Putative serine dehydratase domain
PF14033 1 DUF4246 Protein of unknown function (DUF4246)
PF14040 1 DNase_NucA_NucB Deoxyribonuclease NucA/NucB
PF14138 1 COX16 Cytochrome c oxidase assembly protein COX16
PF14204 1 Ribosomal_L18_c Ribosomal L18 C-terminal region
PF14222 1 MOR2-PAG1_N Cell morphogenesis N-terminal
PF14225 1 MOR2-PAG1_C Cell morphogenesis C-terminal
PF14226 8 DIOX_N non-haem dioxygenase in morphine synthesis N-terminal
PF14228 3 MOR2-PAG1_mid Cell morphogenesis central region
PF14231 1 GXWXG GXWXG protein
PF14232 1 DUF4334 Domain of unknown function (DUF4334)
PF14234 1 DUF4336 Domain of unknown function (DUF4336)
PF14260 2 zf-C4pol C4-type zinc-finger of DNA polymerase delta
PF14288 1 FKS1_dom1 1,3-beta-glucan synthase subunit FKS1, domain-1
PF14304 1 CSTF_C Transcription termination and cleavage factor C-terminal
PF14306 1 PUA_2 PUA-like domain
PF14308 1 DnaJ-X X-domain of DnaJ-containing
PF14310 5 Fn3-like Fibronectin type III-like domain
PF14324 1 PINIT PINIT domain
PF14327 1 CSTF2_hinge Hinge domain of cleavage stimulation factor subunit 2
PF14370 1 Topo_C_assoc C-terminal topoisomerase domain
PF14374 1 Ribos_L4_asso_C 60S ribosomal protein L4 C-terminal domain
PF14377 6 UBM Ubiquitin binding region
PF14378 3 PAP2_3 PAP2 superfamily
PF14382 2 ECR1_N Exosome complex exonuclease RRP4 N-terminal region
PF14388 4 DUF4419 Domain of unknown function (DUF4419)
PF14392 12 zf-CCHC_4 Zinc knuckle
PF14413 1 Thg1C Thg1 C terminal domain
PF14420 3 Clr5 Clr5 domain
PF14429 1 DOCK-C2 C2 domain in Dock180 and Zizimin proteins
PF14437 2 MafB19-deam MafB19-like deaminase
PF14441 1 OTT_1508_deam OTT_1508-like deaminase
PF14447 3 Prok-RING_4 Prokaryotic RING finger family 4
PF14461 1 Prok-E2_B Prokaryotic E2 family B
PF14464 1 Prok-JAB Prokaryotic homologs of the JAB domain
PF14474 1 RTC4 RTC4-like domain
PF14475 1 Mso1_Sec1_bdg Sec1-binding region of Mso1
PF14479 4 HeLo Prion-inhibition and propagation
PF14492 4 EFG_II Elongation Factor G, domain II
PF14497 5 GST_C_3 Glutathione S-transferase, C-terminal domain
PF14500 1 MMS19_N Dos2-interacting transcription regulator of RNA-Pol-II
PF14510 5 ABC_trans_N ABC-transporter N-terminal
PF14521 3 Aspzincin_M35 Lysine-specific metallo-endopeptidase
PF14523 1 Syntaxin_2 Syntaxin-like protein
PF14531 13 Kinase-like Kinase-like
PF14533 1 USP7_C2 Ubiquitin-specific protease C-terminal
PF14538 1 Raptor_N Raptor N-terminal CASPase like domain
PF14543 5 TAXi_N Xylanase inhibitor N-terminal
PF14551 6 MCM_N MCM N-terminal domain
PF14555 3 UBA_4 UBA-like domain
PF14558 4 TRP_N ML-like domain
PF14559 4 TPR_19 Tetratricopeptide repeat
PF14560 7 Ubiquitin_2 Ubiquitin-like domain
PF14570 1 zf-RING_4 RING/Ubox like zinc-binding domain
PF14572 3 Pribosyl_synth Phosphoribosyl synthetase-associated domain
PF14580 1 LRR_9 Leucine-rich repeat
PF14599 1 zinc_ribbon_6 Zinc-ribbon
PF14602 3 Hexapep_2 Hexapeptide repeat of succinyl-transferase
PF14604 16 SH3_9 Variant SH3 domain
PF14608 4 zf-CCCH_2 RNA-binding, Nab2-type zinc finger
PF14609 1 GCP5-Mod21 gamma-Tubulin ring complex non-core subunit mod21
PF14610 1 DUF4448 Protein of unknown function (DUF4448)
PF14611 1 SLS Mitochondrial inner-membrane-bound regulator
PF14612 2 Ino80_Iec3 IEC3 subunit of the Ino80 complex, chromatin re-modelling
PF14613 1 DUF4449 Protein of unknown function (DUF4449)
PF14616 1 DUF4451 Domain of unknown function (DUF4451)
PF14617 1 CMS1 U3-containing 90S pre-ribosomal complex subunit
PF14618 1 DUF4452 Domain of unknown function (DUF4452)
PF14619 1 SnAC Snf2-ATP coupling, chromatin remodelling complex
PF14622 5 Ribonucleas_3_3 Ribonuclease-III-like
PF14629 1 ORC4_C Origin recognition complex (ORC) subunit 4 C-terminus
PF14630 1 ORC5_C Origin recognition complex (ORC) subunit 5 C-terminus
PF14632 1 SPT6_acidic Acidic N-terminal SPT6
PF14633 1 SH2_2 SH2 domain
PF14634 4 zf-RING_5 zinc-RING finger domain
PF14635 1 HHH_7 Helix-hairpin-helix motif
PF14636 1 FNIP_N Folliculin-interacting protein N-terminus
PF14639 1 YqgF Holliday-junction resolvase-like of SPT6
PF14641 1 HTH_44 Helix-turn-helix DNA-binding domain of SPT6
PF14658 1 EF-hand_9 EF-hand domain
PF14661 1 HAUS6_N HAUS augmin-like complex subunit 6 N-terminus
PF14663 1 RasGEF_N_2 Rapamycin-insensitive companion of mTOR RasGEF_N domain
PF14664 1 RICTOR_N Rapamycin-insensitive companion of mTOR, N-term
PF14666 1 RICTOR_M Rapamycin-insensitive companion of mTOR, middle domain
PF14667 1 Polysacc_synt_C Polysaccharide biosynthesis C-terminal domain
PF14668 1 RICTOR_V Rapamycin-insensitive companion of mTOR, domain 5
PF14671 1 DSPn Dual specificity protein phosphatase, N-terminal half
PF14681 4 UPRTase Uracil phosphoribosyltransferase
PF14691 1 Fer4_20 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
PF14698 1 ASL_C2 Argininosuccinate lyase C-terminal
PF14699 1 hGDE_N N-terminal domain from the human glycogen debranching enzyme
PF14700 1 RPOL_N DNA-directed RNA polymerase N-terminal
PF14701 1 hDGE_amylase Glycogen debranching enzyme, glucanotransferase domain
PF14702 1 hGDE_central Central domain of human glycogen debranching enzyme
PF14703 6 PHM7_cyt Cytosolic domain of 10TM putative phosphate transporter
PF14716 1 HHH_8 Helix-hairpin-helix domain
PF14732 1 UAE_UbL Ubiquitin/SUMO-activating enzyme ubiquitin-like domain
PF14748 2 P5CR_dimer Pyrroline-5-carboxylate reductase dimerisation
PF14765 14 PS-DH Polyketide synthase dehydratase
PF14773 1 VIGSSK Helicase-associated putative binding domain, C-terminal
PF14791 1 DNA_pol_B_thumb DNA polymerase beta thumb
PF14792 1 DNA_pol_B_palm DNA polymerase beta palm
PF14806 1 Coatomer_b_Cpla Coatomer beta subunit appendage platform
PF14821 1 Thr_synth_N Threonine synthase N terminus
PF14823 1 Sirohm_synth_C Sirohaem biosynthesis protein C-terminal
PF14824 1 Sirohm_synth_M Sirohaem biosynthesis protein central
PF14826 1 FACT-Spt16_Nlob FACT complex subunit SPT16 N-terminal lobe domain
PF14831 1 DUF4484 Domain of unknown function (DUF4484)
PF14833 1 NAD_binding_11 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
PF14844 1 PH_BEACH PH domain associated with Beige/BEACH
PF14845 1 Glycohydro_20b2 beta-acetyl hexosaminidase like
PF14847 1 Ras_bdg_2 Ras-binding domain of Byr2
PF14852 1 Fis1_TPR_N Fis1 N-terminal tetratricopeptide repeat
PF14853 1 Fis1_TPR_C Fis1 C-terminal tetratricopeptide repeat
PF14856 2 Hce2 Pathogen effector; putative necrosis-inducing factor
PF14880 1 COX14 Cytochrome oxidase c assembly
PF14881 1 Tubulin_3 Tubulin domain
PF14938 2 SNAP Soluble NSF attachment protein, SNAP
PF15044 1 CLU_N Mitochondrial function, CLU-N-term
PF15159 1 PIG-Y Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y
PF15227 1 zf-C3HC4_4 zinc finger of C3HC4-type, RING
PF15251 1 DUF4588 Domain of unknown function (DUF4588)
PF15277 1 Sec3-PIP2_bind Exocyst complex component SEC3 N-terminal PIP2 binding PH
PF15341 1 SLX9 Ribosome biogenesis protein SLX9
PF15365 1 PNRC Proline-rich nuclear receptor coactivator motif
PF15377 1 DUF4604 Domain of unknown function (DUF4604)
PF15402 3 Spc7_N N-terminus of kinetochore NMS complex subunit Spc7
PF15405 2 PH_5 Pleckstrin homology domain
PF15406 1 PH_6 Pleckstrin homology domain
PF15409 2 PH_8 Pleckstrin homology domain
PF15410 3 PH_9 Pleckstrin homology domain
PF15411 2 PH_10 Pleckstrin homology domain
PF15412 1 Nse4-Nse3_bdg Binding domain of Nse4/EID3 to Nse3-MAGE
PF15446 1 zf-PHD-like PHD/FYVE-zinc-finger like domain
PF15456 1 Uds1 Up-regulated During Septation
PF15459 1 RRP14 60S ribosome biogenesis protein Rrp14
PF15460 1 SAS4 Something about silencing, SAS, complex subunit 4
PF15463 1 ECM11 Extracellular mutant protein 11
PF15469 1 Sec5 Exocyst complex component Sec5
PF15511 4 CENP-T_C Centromere kinetochore component CENP-T histone fold
PF15519 1 RBM39linker linker between RRM2 and RRM3 domains in RBM39 protein
PF15577 1 Spc7_C2 Spc7_C2
PF15612 1 WHIM1 WSTF, HB1, Itc1p, MBD9 motif 1
PF15613 1 WSD Williams-Beuren syndrome DDT (WSD), D-TOX E motif
PF15624 1 Mif2_N Kinetochore CENP-C fungal homologue, Mif2, N-terminal
PF15630 2 CENP-S CENP-S protein
PF15715 1 PAF PCNA-associated factor histone like domain
PF15786 1 PET117 PET assembly of cytochrome c oxidase, mitochondrial
PF15879 1 MWFE NADH-ubiquinone oxidoreductase MWFE subunit
PF15901 2 Sortilin_C Sortilin, neurotensin receptor 3, C-terminal
PF15902 2 Sortilin-Vps10 Sortilin, neurotensin receptor 3,
PF15906 1 zf-NOSIP Zinc-finger of nitric oxide synthase-interacting protein
PF15916 1 DUF4743 Domain of unknown function (DUF4743)
PF15924 1 ALG11_N ALG11 mannosyltransferase N-terminus
PF15932 1 DUF4748 Domain of unknown function (DUF4748)
PF15963 1 Myb_DNA-bind_7 Myb DNA-binding like
PF15979 1 Glyco_hydro_115 Glycosyl hydrolase family 115
PF15985 1 KH_6 KH domain
PF16004 1 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component N-terminus
PF16010 2 CDH-cyt Cytochrome domain of cellobiose dehydrogenase
PF16015 1 Promethin Promethin
PF16016 2 VASt VAD1 Analog of StAR-related lipid transfer domain
PF16035 1 Chalcone_2 Chalcone isomerase like
PF16073 6 SAT Starter unit:ACP transacylase in aflatoxin biosynthesis
PF16076 2 Acyltransf_C Acyltransferase C-terminus
PF16078 1 2-oxogl_dehyd_N 2-oxoglutarate dehydrogenase N-terminus
PF16093 1 PAC4 Proteasome assembly chaperone 4
PF16113 7 ECH_2 Enoyl-CoA hydratase/isomerase
PF16114 1 Citrate_bind ATP citrate lyase citrate-binding
PF16121 1 40S_S4_C 40S ribosomal protein S4 C-terminus
PF16123 1 HAGH_C Hydroxyacylglutathione hydrolase C-terminus
PF16124 2 RecQ_Zn_bind RecQ zinc-binding
PF16131 1 Torus Torus domain
PF16134 1 THOC2_N THO complex subunit 2 N-terminus
PF16158 1 N_BRCA1_IG Ig-like domain from next to BRCA1 gene
PF16172 1 DOCK_N DOCK N-terminus
PF16177 1 ACAS_N Acetyl-coenzyme A synthetase N-terminus
PF16183 1 Kinesin_assoc Kinesin-associated
PF16186 1 Arm_3 Atypical Arm repeat
PF16187 1 Peptidase_M16_M Middle or third domain of peptidase_M16
PF16188 1 Peptidase_M24_C C-terminal region of peptidase_M24
PF16189 1 Creatinase_N_2 Creatinase/Prolidase N-terminal domain
PF16190 1 E1_FCCH Ubiquitin-activating enzyme E1 FCCH domain
PF16191 1 E1_4HB Ubiquitin-activating enzyme E1 four-helix bundle
PF16192 3 PMT_4TMC C-terminal four TMM region of protein-O-mannosyltransferase
PF16193 1 AAA_assoc_2 AAA C-terminal domain
PF16197 9 KAsynt_C_assoc Ketoacyl-synthetase C-terminal extension
PF16198 1 TruB_C_2 tRNA pseudouridylate synthase B C-terminal domain
PF16199 1 Radical_SAM_C Radical_SAM C-terminal domain
PF16200 1 Band_7_C C-terminal region of band_7
PF16201 1 NopRA1 Nucleolar pre-ribosomal-associated protein 1
PF16203 3 ERCC3_RAD25_C ERCC3/RAD25/XPB C-terminal helicase
PF16205 1 Ribosomal_S17_N Ribosomal_S17 N-terminal
PF16206 1 Mon2_C C-terminal region of Mon2 protein
PF16209 5 PhoLip_ATPase_N Phospholipid-translocating ATPase N-terminal
PF16211 2 Histone_H2A_C C-terminus of histone H2A
PF16212 5 PhoLip_ATPase_C Phospholipid-translocating P-type ATPase C-terminal
PF16213 2 DCB Dimerisation and cyclophilin-binding domain of Mon2
PF16242 1 Pyrid_ox_like Pyridoxamine 5'-phosphate oxidase like
PF16275 1 SF1-HH Splicing factor 1 helix-hairpin domain
PF16278 1 zf-C2HE C2HE / C2H2 / C2HC zinc-binding finger
PF16282 1 SANT_DAMP1_like SANT/Myb-like domain of DAMP1
PF16300 1 WD40_4 Type of WD40 repeat
PF16320 1 Ribosomal_L12_N Ribosomal protein L7/L12 dimerisation domain
PF16335 1 DUF4965 Domain of unknown function (DUF4965)
PF16363 12 GDP_Man_Dehyd GDP-mannose 4,6 dehydratase
PF16367 1 RRM_7 RNA recognition motif
PF16381 1 Coatomer_g_Cpla Coatomer subunit gamma-1 C-terminal appendage platform
PF16399 1 Aquarius_N Intron-binding protein aquarius N-terminus
PF16413 1 Mlh1_C DNA mismatch repair protein Mlh1 C-terminus
PF16414 1 NPC1_N Niemann-Pick C1 N terminus
PF16415 1 CNOT1_CAF1_bind CCR4-NOT transcription complex subunit 1 CAF1-binding domain
PF16417 1 CNOT1_TTP_bind CCR4-NOT transcription complex subunit 1 TTP binding domain
PF16418 1 CNOT1_HEAT CCR4-NOT transcription complex subunit 1 HEAT repeat
PF16420 1 ATG7_N Ubiquitin-like modifier-activating enzyme ATG7 N-terminus
PF16450 5 Prot_ATP_ID_OB Proteasomal ATPase OB C-terminal domain
PF16455 1 UBD Ubiquitin-binding domain
PF16457 1 PH_12 Pleckstrin homology domain
PF16483 1 Glyco_hydro_64 Beta-1,3-glucanase
PF16486 2 ArgoN N-terminal domain of argonaute
PF16488 2 ArgoL2 Argonaute linker 2 domain
PF16491 1 Peptidase_M48_N CAAX prenyl protease N-terminal, five membrane helices
PF16495 1 SWIRM-assoc_1 SWIRM-associated region 1
PF16499 1 Melibiase_2 Alpha galactosidase A
PF16503 1 zn-ribbon_14 Zinc-ribbon
PF16507 1 BLM10_mid Proteasome-substrate-size regulator, mid region
PF16508 1 NIBRIN_BRCT_II Second BRCT domain on Nijmegen syndrome breakage protein
PF16528 1 Exo84_C Exocyst component 84 C-terminal
PF16541 3 AltA1 Alternaria alternata allergen 1
PF16543 2 DFRP_C DRG Family Regulatory Proteins, Tma46
PF16546 1 SGTA_dimer Homodimerisation domain of SGTA
PF16547 1 BLM10_N Proteasome-substrate-size regulator, N-terminal
PF16558 1 AZUL Amino-terminal Zinc-binding domain of ubiquitin ligase E3A
PF16561 2 AMPK1_CBM Glycogen recognition site of AMP-activated protein kinase
PF16573 1 CLP1_N N-terminal beta-sandwich domain of polyadenylation factor
PF16575 2 CLP1_P mRNA cleavage and polyadenylation factor CLP1 P-loop
PF16579 1 AdenylateSensor Adenylate sensor of SNF1-like protein kinase
PF16589 4 BRCT_2 BRCT domain, a BRCA1 C-terminus domain
PF16641 2 CLIP1_ZNF CLIP1 zinc knuckle
PF16643 1 cNMPbd_u2 Unstructured region on cNMP-binding protein
PF16653 1 Sacchrp_dh_C Saccharopine dehydrogenase C-terminal domain
PF16655 1 PhoD_N PhoD-like phosphatase, N-terminal domain
PF16661 2 Lactamase_B_6 Metallo-beta-lactamase superfamily domain
PF16670 1 PI-PLC-C1 Phosphoinositide phospholipase C, Ca2+-dependent
PF16679 1 CDT1_C DNA replication factor Cdt1 C-terminal domain
PF16686 1 POT1PC ssDNA-binding domain of telomere protection protein
PF16697 1 Yop-YscD_cpl Inner membrane component of T3SS, cytoplasmic domain
PF16714 1 TyrRSs_C Tyrosyl-tRNA synthetase C-terminal domain
PF16715 1 CDPS Cyclodipeptide synthase
PF16717 1 RAC_head Ribosome-associated complex head domain
PF16727 1 REV1_C DNA repair protein REV1 C-terminal domain
PF16746 2 BAR_3 BAR domain of APPL family
PF16752 1 TBCC_N Tubulin-specific chaperone C N-terminal domain
PF16760 1 CBM53 Starch/carbohydrate-binding module (family 53)
PF16770 1 RTT107_BRCT_5 Regulator of Ty1 transposition protein 107 BRCT domain
PF16782 1 SIL1 Nucleotide exchange factor SIL1
PF16796 9 Microtub_bd Microtubule binding
PF16797 1 Fungal_KA1 Fungal kinase associated-1 domain
PF16803 1 DRE2_N Fe-S cluster assembly protein DRE2 N-terminus
PF16815 1 HRI1 Protein HRI1
PF16835 1 SF3A2 Pre-mRNA-splicing factor SF3a complex subunit 2 (Prp11)
PF16837 1 SF3A3 Pre-mRNA-splicing factor SF3A3, of SF3a complex, Prp9
PF16842 1 RRM_occluded Occluded RNA-recognition motif
PF16863 1 NtCtMGAM_N N-terminal barrel of NtMGAM and CtMGAM, maltase-glucoamylase
PF16866 1 PHD_4 PHD-finger
PF16870 1 OxoGdeHyase_C 2-oxoglutarate dehydrogenase C-terminal
PF16874 1 Glyco_hydro_36C Glycosyl hydrolase family 36 C-terminal domain
PF16875 1 Glyco_hydro_36N Glycosyl hydrolase family 36 N-terminal domain
PF16879 1 Sin3a_C C-terminal domain of Sin3a protein
PF16881 1 LIAS_N N-terminal domain of lipoyl synthase of Radical_SAM family
PF16884 2 ADH_N_2 N-terminal domain of oxidoreductase
PF16886 1 ATP-synt_ab_Xtn ATPsynthase alpha/beta subunit N-term extension
PF16891 2 STPPase_N Serine-threonine protein phosphatase N-terminal domain
PF16892 1 CHS5_N Chitin biosynthesis protein CHS5 N-terminus
PF16893 1 fn3_2 Fibronectin type III domain
PF16897 2 MMR_HSR1_Xtn C-terminal region of MMR_HSR1 domain
PF16898 1 TOPRIM_C C-terminal associated domain of TOPRIM
PF16899 1 Cyclin_C_2 Cyclin C-terminal domain
PF16900 1 REPA_OB_2 Replication protein A OB domain
PF16901 1 DAO_C C-terminal domain of alpha-glycerophosphate oxidase
PF16906 1 Ribosomal_L26 Ribosomal proteins L26 eukaryotic, L24P archaeal
PF16908 1 VPS13 Vacuolar sorting-associated protein 13, N-terminal
PF16909 1 VPS13_C Vacuolar-sorting-associated 13 protein C-terminal
PF16910 1 VPS13_mid_rpt Repeating coiled region of VPS13
PF16912 2 Glu_dehyd_C Glucose dehydrogenase C-terminus
PF16916 1 ZT_dimer Dimerisation domain of Zinc Transporter
PF16923 1 Glyco_hydro_63N Glycosyl hydrolase family 63 N-terminal domain
PF16944 1 KCH Fungal potassium channel
PF16969 1 SRP68 RNA-binding signal recognition particle 68
PF16978 1 CRIM SAPK-interacting protein 1 (Sin1), middle CRIM domain
PF16979 1 SIN1_PH SAPK-interacting protein 1 (Sin1), Pleckstrin-homology
PF16983 2 MFS_MOT1 Molybdate transporter of MFS superfamily
PF16988 1 Vps36-NZF-N Vacuolar protein sorting 36 NZF-N zinc-finger domain
PF17004 1 SRP_TPR_like Putative TPR-like repeat
PF17035 2 BET Bromodomain extra-terminal - transcription regulation
PF17043 1 MAT1-1-2 Mating type protein 1-1-2 of unknown function
PF17048 3 Ceramidse_alk_C Neutral/alkaline non-lysosomal ceramidase, C-terminal
PF17050 1 AIM5 Altered inheritance of mitochondria 5
PF17100 4 NACHT_N N-terminal domain of NWD NACHT-NTPase
PF17104 1 DUF5102 Domain of unknown function (DUF5102)
PF17107 1 SesA N-terminal domain on NACHT_NTPase and P-loop NTPases
PF17109 1 Goodbye fungal STAND N-terminal Goodbye domain
PF17110 1 TFB6 Subunit 11 of the general transcription factor TFIIH
PF17119 2 MMU163 Mitochondrial protein up-regulated during meiosis
PF17121 1 zf-C3HC4_5 Zinc finger, C3HC4 type (RING finger)
PF17122 1 zf-C3H2C3 Zinc-finger
PF17123 6 zf-RING_11 RING-like zinc finger
PF17124 1 ThiJ_like ThiJ/PfpI family-like
PF17125 1 Methyltr_RsmF_N N-terminal domain of 16S rRNA methyltransferase RsmF
PF17135 1 Ribosomal_L18 Ribosomal protein 60S L18 and 50S L18e
PF17144 1 Ribosomal_L5e Ribosomal large subunit proteins 60S L5, and 50S L18
PF17146 1 PIN_6 PIN domain of ribonuclease
PF17168 1 DUF5127 Domain of unknown function (DUF5127)
PF17171 1 GST_C_6 Glutathione S-transferase, C-terminal domain
PF17172 2 GST_N_4 Glutathione S-transferase N-terminal domain
PF17177 1 PPR_long Pentacotripeptide-repeat region of PRORP
PF17183 1 Blt1_C Get5 carboxyl domain
PF17184 1 Rit1_C Rit1 N-terminal domain
PF17187 1 Svf1_C Svf1-like C-terminal lipocalin-like domain
PF17207 6 MCM_OB MCM OB domain
PF17215 1 Rrp44_S1 S1 domain
PF17216 1 Rrp44_CSD1 Rrp44-like cold shock domain
PF17242 1 DUF5315 Disordered region of unknown function (DUF5315)
PF17254 1 DUF5321 Family of unknown function (DUF5321)
PF17283 1 Zn_ribbon_SprT SprT-like zinc ribbon domain
PF17284 1 Spermine_synt_N Spermidine synthase tetramerisation domain
PF17285 1 PRMT5_TIM PRMT5 TIM barrel domain
PF17286 1 PRMT5_C PRMT5 oligomerisation domain
PF17291 1 M60-like_N N-terminal domain of M60-like peptidases
PF17292 1 POB3_N POB3-like N-terminal PH domain
PF17304 1 DUF5353 Family of unknown function (DUF5353)
PF17389 1 Bac_rhamnosid6H Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain
PF17403 1 Nrap_D2 Nrap protein PAP/OAS-like domain
PF17404 1 Nrap_D3 Nrap protein domain 3
PF17405 1 Nrap_D4 Nrap protein nucleotidyltransferase domain 4
PF17406 1 Nrap_D5 Nrap protein PAP/OAS1-like domain 5
PF17407 1 Nrap_D6 Nrap protein domain 6
PF17652 1 Glyco_hydro81C Glycosyl hydrolase family 81 C-terminal domain
PF17667 7 Pkinase_fungal Fungal protein kinase
PF17674 1 HHH_9 HHH domain
PF17675 1 APG6_N Apg6 coiled-coil region
PF17677 1 Glyco_hydro38C2 Glycosyl hydrolases family 38 C-terminal beta sandwich domain
PF17678 2 Glyco_hydro_92N Glycosyl hydrolase family 92 N-terminal domain
PF17681 5 GCP_N_terminal Gamma tubulin complex component N-terminal
PF17682 1 Tau95_N Tau95 Triple barrel domain
PF17683 1 TFIIF_beta_N TFIIF, beta subunit N-terminus
PF17733 1 DUF5572 Family of unknown function (DUF5572)
PF17745 1 Ydr279_N Ydr279p protein triple barrel domain
PF17747 1 VID27_PH VID27 PH-like domain
PF17748 1 VID27_N VID27 N-terminal region
PF17753 1 Ig_mannosidase Ig-fold domain
PF17759 1 tRNA_synthFbeta Phenylalanyl tRNA synthetase beta chain CLM domain
PF17763 2 Asparaginase_C Glutaminase/Asparaginase C-terminal domain
PF17767 1 NAPRTase_N Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain
PF17769 1 PurK_C Phosphoribosylaminoimidazole carboxylase C-terminal domain
PF17771 1 ADAM_CR_2 ADAM cysteine-rich domain
PF17772 2 zf-MYST MYST family zinc finger domain
PF17777 2 RL10P_insert Insertion domain in 60S ribosomal protein L10P
PF17778 2 BLACT_WH Beta-lactamase associated winged helix domain
PF17781 1 RPN1_RPN2_N RPN1/RPN2 N-terminal domain
PF17784 5 Sulfotransfer_4 Sulfotransferase domain
PF17786 1 Mannosidase_ig Mannosidase Ig/CBM-like domain
PF17799 1 RRM_Rrp7 Rrp7 RRM-like N-terminal domain
PF17800 1 NPL Nucleoplasmin-like domain
PF17801 1 Melibiase_C Alpha galactosidase C-terminal beta sandwich domain
PF17807 1 zf-UBP_var Variant UBP zinc finger
PF17820 1 PDZ_6 PDZ domain
PF17828 1 FAS_N N-terminal domain in fatty acid synthase subunit beta
PF17829 1 GH115_C Gylcosyl hydrolase family 115 C-terminal domain
PF17830 2 STI1 STI1 domain
PF17833 1 UPF0113_N UPF0113 Pre-PUA domain
PF17835 1 NOG1_N NOG1 N-terminal helical domain
PF17846 2 XRN_M Xrn1 helical domain
PF17849 2 OB_Dis3 Dis3-like cold-shock domain 2 (CSD2)
PF17852 1 Dynein_AAA_lid Dynein heavy chain AAA lid domain
PF17855 6 MCM_lid MCM AAA-lid domain
PF17856 2 TIP49_C TIP49 AAA-lid domain
PF17857 1 AAA_lid_1 AAA+ lid domain
PF17862 16 AAA_lid_3 AAA+ lid domain
PF17863 1 AAA_lid_2 AAA lid domain
PF17865 1 AAA_lid_5 Midasin AAA lid domain
PF17866 1 AAA_lid_6 AAA lid domain
PF17867 3 AAA_lid_7 Midasin AAA lid domain
PF17871 2 AAA_lid_9 AAA lid domain
PF17872 2 AAA_lid_10 AAA lid domain
PF17875 1 RPA43_OB RPA43 OB domain in RNA Pol I
PF17877 1 Dis3l2_C_term DIS3-like exonuclease 2 C terminal
PF17900 3 Peptidase_M1_N Peptidase M1 N-terminal domain
PF17903 2 KH_8 Krr1 KH1 domain
PF17907 2 AWS AWS domain
PF17911 1 Ski2_N Ski2 N-terminal region
PF17917 1 RT_RNaseH RNase H-like domain found in reverse transcriptase
PF17947 1 4HB Four helical bundle domain
PF17951 1 FAS_meander Fatty acid synthase meander beta sheet domain
PF18004 1 RPN2_C 26S proteasome regulatory subunit RPN2 C-terminal domain
PF18005 1 eIF3m_C_helix eIF3 subunit M, C-terminal helix
PF18011 2 Catalase_C C-terminal domain found in long catalases
PF18018 1 DNA_pol_D_N DNA polymerase delta subunit OB-fold domain
PF18031 1 UCH_C Ubiquitin carboxyl-terminal hydrolases
PF18035 1 Bap31_Bap29_C Bap31/Bap29 cytoplasmic coiled-coil domain
PF18044 3 zf-CCCH_4 CCCH-type zinc finger
PF18051 1 RPN1_C 26S proteasome non-ATPase regulatory subunit RPN1 C-terminal
PF18055 1 RPN6_N 26S proteasome regulatory subunit RPN6 N-terminal domain
PF18072 1 FGAR-AT_linker Formylglycinamide ribonucleotide amidotransferase linker domain
PF18076 1 FGAR-AT_N Formylglycinamide ribonucleotide amidotransferase N-terminal
PF18086 1 PPIP5K2_N Diphosphoinositol pentakisphosphate kinase 2 N-terminal domain
PF18097 1 Vta1_C Vta1 C-terminal domain
PF18098 1 RPN5_C 26S proteasome regulatory subunit RPN5 C-terminal domain
PF18101 1 Pan3_PK Pan3 Pseudokinase domain
PF18107 1 HTH_ABP1_N Fission yeast centromere protein N-terminal domain
PF18115 1 Tudor_3 DNA repair protein Crb2 Tudor domain
PF18121 1 TFA2_Winged_2 TFA2 Winged helix domain 2
PF18126 1 Mitoc_mL59 Mitochondrial ribosomal protein mL59
PF18129 1 SH3_12 Xrn1 SH3-like domain
PF18132 1 Tyosinase_C Tyosinase C-terminal domain
PF18136 1 DNApol_Exo DNA mitochondrial polymerase exonuclease domain
PF18137 1 ORC_WH_C Origin recognition complex winged helix C-terminal
PF18141 1 DUF5599 Domain of unknown function (DUF5599)
PF18142 1 SLATT_fungal SMODS and SLOG-associating 2TM effector domain
PF18149 1 Helicase_PWI N-terminal helicase PWI domain
PF18151 1 DUF5601 Domain of unknown function (DUF5601)
PF18158 1 AidB_N Adaptive response protein AidB N-terminal domain
PF18198 1 AAA_lid_11 Dynein heavy chain AAA lid domain
PF18261 1 Rpn9_C Rpn9 C-terminal helix
PF18262 1 PhetRS_B1 Phe-tRNA synthetase beta subunit B1 domain
PF18263 1 MCM6_C MCM6 C-terminal winged-helix domain
PF18264 1 preSET_CXC CXC domain
PF18265 1 Nas2_N Nas2 N_terminal domain
PF18306 1 LDcluster4 SLOG cluster4 family
PF18307 1 Tfb2_C Transcription factor Tfb2 (p52) C-terminal domain
PF18308 1 GGA_N-GAT GGA N-GAT domain
PF18311 1 Rrp40_N Exosome complex exonuclease Rrp40 N-terminal domain
PF18314 1 FAS_I_H Fatty acid synthase type I helical domain
PF18323 1 CSN5_C Cop9 signalosome subunit 5 C-terminal domain
PF18325 1 Fas_alpha_ACP Fatty acid synthase subunit alpha Acyl carrier domain
PF18332 1 XRN1_D1 Exoribonuclease Xrn1 D1 domain
PF18334 1 XRN1_D2_D3 Exoribonuclease Xrn1 D2/D3 domain
PF18368 1 Ig_GlcNase Exo-beta-D-glucosaminidase Ig-fold domain
PF18376 1 MDD_C Mevalonate 5-diphosphate decarboxylase C-terminal domain
PF18378 1 Nup188_C Nuclear pore protein NUP188 C-terminal domain
PF18380 1 GEN1_C Holliday junction resolvase Gen1 C-terminal domain
PF18400 1 Thioredoxin_12 Thioredoxin-like domain
PF18401 1 Thioredoxin_13 Thioredoxin-like domain
PF18402 1 Thioredoxin_14 Thioredoxin-like domain
PF18403 1 Thioredoxin_15 Thioredoxin-like domain
PF18404 1 Glyco_transf_24 Glucosyltransferase 24
PF18457 1 PUD1_2 Up-Regulated in long-lived daf-2
PF18477 1 PIN_9 PIN like domain
PF18503 1 RPN6_C_helix 26S proteasome subunit RPN6 C-terminal helix domain
PF18553 1 PheRS_DBD3 PheRS DNA binding domain 3
PF18554 1 PheRS_DBD2 PheRS DNA binding domain 2
PF18564 1 Glyco_hydro_5_C Glycoside hydrolase family 5 C-terminal domain
PF18570 1 Nup54_57_C NUP57/Nup54 C-terminal domain
PF18595 1 DHR10 Designed helical repeat protein 10 domain
PF18600 1 Ezh2_MCSS MCSS domain
PF18601 1 EZH2_N EZH2 N-terminal domain
PF18631 1 Cucumopine_C Cucumopine synthase C-terminal helical bundle domain
PF18777 1 CRM1_repeat Chromosome region maintenance or exportin repeat
PF18784 1 CRM1_repeat_2 CRM1 / Exportin repeat 2
PF18785 1 Inv-AAD Invertebrate-AID/APOBEC-deaminase
PF18787 1 CRM1_repeat_3 CRM1 / Exportin repeat 3
PF18808 1 Importin_rep_4 Importin repeat
PF18816 1 Importin_rep_5 Importin repeat
PF18826 1 bVLRF1 bacteroidetes VLRF1 release factor
PF18829 1 Importin_rep_6 Importin repeat 6
PF18854 1 baeRF_family10 Bacterial archaeo-eukaryotic release factor family 10
PF18859 1 acVLRF1 Actinobacteria/chloroflexi VLRF1 release factor

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