Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauB2\|998
Gene name
Location	Contig_122:862..1804
Strand	+
Gene length (bp)	942
Transcript length (bp)	942
Coding sequence length (bp)	942
Protein length (aa)	314

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF12138	Spherulin4	Spherulation-specific family 4	2.4E-56	10	308

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P11113\|SR4_PHYPO	Spherulin-4 OS=Physarum polycephalum PE=2 SV=1	10	131	8.0E-16

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 23	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauB2\|998 MARDMVAPFILVPLYMYPLEQAWEPLFQAARAHREVRFVAVVNPASGPGAEALPDQSYIAALRRLADEPNIEAVG YVYCSYGARQPAAVCADMEAYCGWRLDGQPVIGGVFFDEAPAGHDKVDWMHHLARHAHQTWRAQHDAQHDAQHDA QHDAHDACPPVGETPAQDSKALDSKALDSKALVILNPGVAVPLAYFAHCHHVVVFEGSEAEWQRRCIDQPGLDPI LRDHDALSKAVAIIHSTQQPPRRLHRLLSLFHNSSNKQHPACHAAHTLAQIRALGLMGVYLTDQLHGGYTRWPAA WMQLADAVAQWQL*
Coding	>OphauB2\|998 ATGGCGCGCGACATGGTGGCCCCCTTCATCCTCGTGCCGCTCTACATGTACCCGCTGGAGCAGGCATGGGAGCCA CTGTTCCAGGCGGCTCGCGCCCACCGTGAGGTGCGCTTCGTGGCGGTGGTGAATCCGGCCAGCGGACCCGGGGCT GAGGCGCTTCCGGACCAGAGCTACATTGCGGCTCTACGGCGCTTGGCCGACGAGCCCAACATTGAGGCGGTTGGC TATGTCTACTGCAGCTATGGCGCTCGCCAGCCTGCCGCCGTCTGTGCCGACATGGAGGCCTACTGCGGCTGGCGC CTCGACGGGCAGCCCGTGATTGGGGGCGTCTTTTTTGACGAGGCGCCTGCTGGCCACGACAAGGTGGACTGGATG CATCACCTGGCCCGTCACGCACACCAGACGTGGCGCGCCCAGCATGACGCCCAGCATGATGCCCAGCATGATGCC CAGCATGACGCCCACGACGCCTGCCCGCCTGTGGGGGAGACGCCAGCCCAAGACTCCAAGGCCCTCGACTCCAAG GCCCTCGACTCCAAGGCCCTCGTCATCCTCAACCCTGGCGTTGCCGTGCCTCTGGCCTACTTTGCCCACTGCCAC CACGTCGTCGTCTTTGAGGGCTCCGAGGCTGAGTGGCAGCGCCGCTGCATCGACCAGCCTGGCCTTGACCCCATT CTCCGCGACCACGACGCTCTCTCCAAGGCCGTCGCCATTATCCACTCCACCCAGCAGCCCCCCCGCCGCCTCCAT CGCCTGCTCTCGCTTTTCCACAACTCGTCCAACAAGCAACACCCCGCCTGCCATGCCGCCCATACCCTCGCCCAG ATTCGCGCTCTCGGCCTCATGGGAGTCTACCTGACAGACCAGCTCCACGGTGGCTATACGAGATGGCCTGCCGCA TGGATGCAGCTTGCCGATGCCGTGGCGCAATGGCAACTGTGA
Transcript	>OphauB2\|998 ATGGCGCGCGACATGGTGGCCCCCTTCATCCTCGTGCCGCTCTACATGTACCCGCTGGAGCAGGCATGGGAGCCA CTGTTCCAGGCGGCTCGCGCCCACCGTGAGGTGCGCTTCGTGGCGGTGGTGAATCCGGCCAGCGGACCCGGGGCT GAGGCGCTTCCGGACCAGAGCTACATTGCGGCTCTACGGCGCTTGGCCGACGAGCCCAACATTGAGGCGGTTGGC TATGTCTACTGCAGCTATGGCGCTCGCCAGCCTGCCGCCGTCTGTGCCGACATGGAGGCCTACTGCGGCTGGCGC CTCGACGGGCAGCCCGTGATTGGGGGCGTCTTTTTTGACGAGGCGCCTGCTGGCCACGACAAGGTGGACTGGATG CATCACCTGGCCCGTCACGCACACCAGACGTGGCGCGCCCAGCATGACGCCCAGCATGATGCCCAGCATGATGCC CAGCATGACGCCCACGACGCCTGCCCGCCTGTGGGGGAGACGCCAGCCCAAGACTCCAAGGCCCTCGACTCCAAG GCCCTCGACTCCAAGGCCCTCGTCATCCTCAACCCTGGCGTTGCCGTGCCTCTGGCCTACTTTGCCCACTGCCAC CACGTCGTCGTCTTTGAGGGCTCCGAGGCTGAGTGGCAGCGCCGCTGCATCGACCAGCCTGGCCTTGACCCCATT CTCCGCGACCACGACGCTCTCTCCAAGGCCGTCGCCATTATCCACTCCACCCAGCAGCCCCCCCGCCGCCTCCAT CGCCTGCTCTCGCTTTTCCACAACTCGTCCAACAAGCAACACCCCGCCTGCCATGCCGCCCATACCCTCGCCCAG ATTCGCGCTCTCGGCCTCATGGGAGTCTACCTGACAGACCAGCTCCACGGTGGCTATACGAGATGGCCTGCCGCA TGGATGCAGCTTGCCGATGCCGTGGCGCAATGGCAACTGTGA
Gene	>OphauB2\|998 ATGGCGCGCGACATGGTGGCCCCCTTCATCCTCGTGCCGCTCTACATGTACCCGCTGGAGCAGGCATGGGAGCCA CTGTTCCAGGCGGCTCGCGCCCACCGTGAGGTGCGCTTCGTGGCGGTGGTGAATCCGGCCAGCGGACCCGGGGCT GAGGCGCTTCCGGACCAGAGCTACATTGCGGCTCTACGGCGCTTGGCCGACGAGCCCAACATTGAGGCGGTTGGC TATGTCTACTGCAGCTATGGCGCTCGCCAGCCTGCCGCCGTCTGTGCCGACATGGAGGCCTACTGCGGCTGGCGC CTCGACGGGCAGCCCGTGATTGGGGGCGTCTTTTTTGACGAGGCGCCTGCTGGCCACGACAAGGTGGACTGGATG CATCACCTGGCCCGTCACGCACACCAGACGTGGCGCGCCCAGCATGACGCCCAGCATGATGCCCAGCATGATGCC CAGCATGACGCCCACGACGCCTGCCCGCCTGTGGGGGAGACGCCAGCCCAAGACTCCAAGGCCCTCGACTCCAAG GCCCTCGACTCCAAGGCCCTCGTCATCCTCAACCCTGGCGTTGCCGTGCCTCTGGCCTACTTTGCCCACTGCCAC CACGTCGTCGTCTTTGAGGGCTCCGAGGCTGAGTGGCAGCGCCGCTGCATCGACCAGCCTGGCCTTGACCCCATT CTCCGCGACCACGACGCTCTCTCCAAGGCCGTCGCCATTATCCACTCCACCCAGCAGCCCCCCCGCCGCCTCCAT CGCCTGCTCTCGCTTTTCCACAACTCGTCCAACAAGCAACACCCCGCCTGCCATGCCGCCCATACCCTCGCCCAG ATTCGCGCTCTCGGCCTCATGGGAGTCTACCTGACAGACCAGCTCCACGGTGGCTATACGAGATGGCCTGCCGCA TGGATGCAGCTTGCCGATGCCGTGGCGCAATGGCAACTGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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