© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|974 |
| Gene name | |
| Location | Contig_120:48968..49605 |
| Strand | + |
| Gene length (bp) | 637 |
| Transcript length (bp) | 585 |
| Coding sequence length (bp) | 585 |
| Protein length (aa) | 195 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13086 | AAA_11 | AAA domain | 4.3E-07 | 102 | 189 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9P2E3|ZNFX1_HUMAN | NFX1-type zinc finger-containing protein 1 OS=Homo sapiens GN=ZNFX1 PE=2 SV=2 | 89 | 190 | 6.0E-10 |
| sp|Q8R151|ZNFX1_MOUSE | NFX1-type zinc finger-containing protein 1 OS=Mus musculus GN=Znfx1 PE=1 SV=3 | 89 | 190 | 9.0E-10 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0004386 | helicase activity | Yes |
| GO:0003824 | catalytic activity | No |
| GO:0140657 | ATP-dependent activity | No |
| GO:0003674 | molecular_function | No |
| GO:0140640 | catalytic activity, acting on a nucleic acid | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 57 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|974 MCKIDAINARHELDASLQDLRKPVTYKDILSMLEFSGEDEFYWESFQVPEQEAGFQVAARNNAPLTPSLVYQMWI QGKRRSPIDCNSCVWALPMETRFQLHDKWSKKVDKEKMAHYAELAEKHAQLSKQINNFYEDTNRNVLRSKRIIGC TTTAASMYQSIIASASPDIVIVEEAGEILESHLFAALSQSIVIH* |
| Coding | >OphauB2|974 ATGTGCAAAATTGACGCTATTAACGCCAGACATGAACTGGATGCGTCATTGCAAGATTTGCGGAAGCCTGTCACA TACAAGGACATACTTTCAATGCTAGAGTTCAGTGGCGAAGATGAATTCTATTGGGAATCATTCCAGGTTCCTGAG CAAGAGGCCGGCTTTCAAGTTGCTGCAAGAAACAACGCTCCGCTCACTCCATCTCTTGTCTACCAGATGTGGATC CAGGGCAAACGCAGGAGCCCCATAGACTGCAACAGTTGCGTTTGGGCGCTGCCCATGGAGACCAGGTTTCAGCTC CATGATAAATGGTCCAAGAAAGTTGACAAGGAGAAGATGGCCCATTACGCTGAGCTTGCTGAGAAGCATGCTCAA CTTAGCAAGCAAATCAACAACTTTTATGAGGATACAAATCGCAATGTGCTGAGAAGCAAACGAATCATTGGCTGT ACAACGACGGCAGCATCCATGTATCAGTCAATAATTGCTTCTGCGTCACCAGATATTGTCATCGTGGAAGAGGCA GGAGAAATCCTCGAGTCTCATCTGTTTGCAGCTCTCAGCCAATCAATAGTTATCCATTGA |
| Transcript | >OphauB2|974 ATGTGCAAAATTGACGCTATTAACGCCAGACATGAACTGGATGCGTCATTGCAAGATTTGCGGAAGCCTGTCACA TACAAGGACATACTTTCAATGCTAGAGTTCAGTGGCGAAGATGAATTCTATTGGGAATCATTCCAGGTTCCTGAG CAAGAGGCCGGCTTTCAAGTTGCTGCAAGAAACAACGCTCCGCTCACTCCATCTCTTGTCTACCAGATGTGGATC CAGGGCAAACGCAGGAGCCCCATAGACTGCAACAGTTGCGTTTGGGCGCTGCCCATGGAGACCAGGTTTCAGCTC CATGATAAATGGTCCAAGAAAGTTGACAAGGAGAAGATGGCCCATTACGCTGAGCTTGCTGAGAAGCATGCTCAA CTTAGCAAGCAAATCAACAACTTTTATGAGGATACAAATCGCAATGTGCTGAGAAGCAAACGAATCATTGGCTGT ACAACGACGGCAGCATCCATGTATCAGTCAATAATTGCTTCTGCGTCACCAGATATTGTCATCGTGGAAGAGGCA GGAGAAATCCTCGAGTCTCATCTGTTTGCAGCTCTCAGCCAATCAATAGTTATCCATTGA |
| Gene | >OphauB2|974 ATGTGCAAAATTGACGCTATTAACGCCAGACATGAACTGGATGCGTCATTGCAAGATTTGCGGAAGCCTGTCACA TACAAGGACATACTTTCAATGCTAGAGTTCAGTGGCGAAGATGAATTCTATTGGGAATCATTCCAGGTTCCTGAG CAAGAGGCCGGCTTTCAAGTTGCTGCAAGAAACAACGCTCCGCTCACTCCATCTCTTGTCTACCAGATGTGGATC CAGGGCAAACGCAGGAGCCCCATAGACTGCAACAGTTGCGTTTGGGCGCTGCCCATGGAGACCAGGTTTCAGCTC CATGATAAATGGTCCAAGAAAGTTGACAAGGAGAAGATGGCCCATTACGCTGAGCTTGCTGAGAAGCATGCTCAA CTTAGCAAGCAAATCAACAACTTTTATGAGGATACAAATCGCAATGTGCTGAGAAGCAAACGAATCATTGGCTGT ACAACGACGGCAGCATCCATGTATCAGTCAATAATTGCTTCTGCGTCACCAGATATTGTCATCGTGGAAGAGGCA GGAGAAATCCTCGAGTCTCATCTGTTTGCAGCTCTCAGCCAGTCTGTGAAACAGCTCATCCTTATTGGCGACCAC AAGCAGCTCCGGCCAAAGATCAATAGTTATCCATTGA |