Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|967
Gene name
LocationContig_120:31186..32631
Strand-
Gene length (bp)1445
Transcript length (bp)1203
Coding sequence length (bp)1203
Protein length (aa) 401

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02386 TrkH Cation transport protein 1.8E-95 5 392

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P47946|TRK1_SCHPO Potassium transport protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=trk1 PE=3 SV=2 4 399 2.0E-97
sp|P28584|TRK2_YEAST Low-affinity potassium transport protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TRK2 PE=1 SV=1 4 392 2.0E-94
sp|P12685|TRK1_YEAST High-affinity potassium transport protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TRK1 PE=1 SV=1 4 392 4.0E-89
sp|P28569|TRK1_SACUV High-affinity potassium transport protein OS=Saccharomyces uvarum GN=TRK1 PE=3 SV=1 4 392 8.0E-89
sp|Q10065|TRK2_SCHPO Potassium transport protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=trk2 PE=2 SV=1 4 390 9.0E-84
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Swissprot ID Swissprot Description Start End E-value
sp|P47946|TRK1_SCHPO Potassium transport protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=trk1 PE=3 SV=2 4 399 2.0E-97
sp|P28584|TRK2_YEAST Low-affinity potassium transport protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TRK2 PE=1 SV=1 4 392 2.0E-94
sp|P12685|TRK1_YEAST High-affinity potassium transport protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TRK1 PE=1 SV=1 4 392 4.0E-89
sp|P28569|TRK1_SACUV High-affinity potassium transport protein OS=Saccharomyces uvarum GN=TRK1 PE=3 SV=1 4 392 8.0E-89
sp|Q10065|TRK2_SCHPO Potassium transport protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=trk2 PE=2 SV=1 4 390 9.0E-84
sp|Q54DA4|Y2412_DICDI Putative potassium transport protein DDB_G0292412 OS=Dictyostelium discoideum GN=DDB_G0292412 PE=2 SV=1 14 385 4.0E-32
sp|Q84TI7|HKT1_ARATH Sodium transporter HKT1 OS=Arabidopsis thaliana GN=HKT1 PE=1 SV=1 9 388 3.0E-21
sp|Q6H501|HKT6_ORYSJ Probable cation transporter HKT6 OS=Oryza sativa subsp. japonica GN=HKT6 PE=2 SV=1 6 373 2.0E-16
sp|Q8L481|HKT3_ORYSJ Probable cation transporter HKT3 OS=Oryza sativa subsp. japonica GN=HKT3 PE=2 SV=1 15 373 2.0E-16
sp|Q0D9S3|HKT1_ORYSJ Cation transporter HKT1 OS=Oryza sativa subsp. japonica GN=HKT1 PE=1 SV=1 26 380 8.0E-15
sp|A2YGP9|HKT1_ORYSI Cation transporter HKT1 OS=Oryza sativa subsp. indica GN=HKT1 PE=1 SV=2 26 380 8.0E-15
sp|Q93XI5|HKT2_ORYSI Cation transporter HKT2 OS=Oryza sativa subsp. indica GN=HKT2 PE=1 SV=1 26 380 3.0E-14
sp|Q8L4K5|HKT9_ORYSJ Probable cation transporter HKT9 OS=Oryza sativa subsp. japonica GN=HKT9 PE=2 SV=1 21 373 8.0E-14
sp|Q7XPF8|HKT4_ORYSJ Cation transporter HKT4 OS=Oryza sativa subsp. japonica GN=HKT4 PE=1 SV=2 4 375 9.0E-14
sp|Q0JNB6|HKT8_ORYSJ Cation transporter HKT8 OS=Oryza sativa subsp. japonica GN=HKT8 PE=3 SV=1 67 373 4.0E-10
sp|A2WNZ9|HKT8_ORYSI Cation transporter HKT8 OS=Oryza sativa subsp. indica GN=HKT8 PE=2 SV=2 67 373 8.0E-10
sp|Q7XPF7|HKT7_ORYSJ Probable cation transporter HKT7 OS=Oryza sativa subsp. japonica GN=HKT7 PE=2 SV=2 64 373 1.0E-06
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GO

GO Term Description Terminal node
GO:0055085 transmembrane transport Yes
GO:0006812 cation transport Yes
GO:0008324 cation transmembrane transporter activity Yes
GO:0022857 transmembrane transporter activity No
GO:0009987 cellular process No
GO:0003674 molecular_function No
GO:0051179 localization No
GO:0005215 transporter activity No
GO:0015075 ion transmembrane transporter activity No
GO:0008150 biological_process No
GO:0051234 establishment of localization No
GO:0006810 transport No
GO:0006811 ion transport No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 52 0.5

Transmembrane Domains

Domain # Start End Length
1 27 49 22
2 94 116 22
3 148 170 22
4 218 240 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|967
MPRLTSRERDEIGGVEYQALKLLLKVITAYFFGMQLLGALGLLVWIHLANAKYTILLDSVHQDKTWWAFYTSQSL
MDNLGFTLTPDNMVPFCDTIWPLLLLSFVALAGETLYPVFLRCVIWAMARLVPHTSPQRLALAYLLDHPRRCYTL
LFPSGTTWALFAIIGALNVIDTVLIVVLDLHNAEVAHLKLVNRFVSAFFQAVASRHAGTTPYNLDKVSPAVQFSL
LVMMYISIYPVAMSIRTSSTYEQGSVGVWACQEAYDEQTASTYLVQHIQQQLGFDLWYIFLGIFLLAVTEGPSVA
DLNDSVKLTIRRLWLRVNPSFQHMKIFPIFFEVVSAYANVGISLGHPSVNSALSTKFSVAGKLVVCAMMIRGRHR
GMPHGLDRAIMLPDEHLVLESRRES*
Coding >OphauB2|967
ATGCCGCGGCTAACGAGTCGCGAGAGAGACGAAATCGGCGGCGTCGAGTACCAGGCGCTCAAGCTGCTCCTCAAA
GTCATTACCGCCTACTTTTTCGGCATGCAGCTCCTTGGCGCACTCGGCCTGCTCGTCTGGATACATTTAGCCAAT
GCAAAGTATACAATACTCTTGGACTCTGTTCACCAAGACAAGACCTGGTGGGCCTTTTACACGTCGCAGTCTCTC
ATGGACAATCTCGGCTTCACCCTCACGCCCGACAACATGGTTCCCTTTTGCGATACCATTTGGCCGCTTCTGCTC
CTTAGCTTCGTCGCCTTGGCGGGCGAGACGCTCTACCCCGTCTTTTTGCGCTGCGTCATCTGGGCCATGGCGAGG
CTTGTGCCGCACACGTCGCCGCAGCGCCTGGCTCTGGCCTATCTTCTTGACCATCCGCGCCGGTGCTATACTCTC
CTCTTCCCCAGCGGCACCACCTGGGCCCTCTTTGCCATTATTGGCGCGCTCAACGTGATTGACACGGTGCTGATT
GTCGTGCTCGACTTGCACAATGCCGAGGTTGCCCACCTGAAGCTGGTGAATCGCTTCGTGTCTGCCTTTTTTCAG
GCAGTGGCGTCGCGGCATGCTGGCACCACGCCGTATAATTTGGATAAAGTGAGTCCGGCGGTGCAGTTTAGTCTG
CTCGTCATGATGTATATTTCTATATACCCCGTCGCCATGAGTATCCGCACGTCGAGCACTTACGAGCAGGGCTCC
GTCGGCGTCTGGGCTTGTCAAGAGGCGTATGACGAGCAGACAGCATCGACTTATCTCGTGCAGCATATCCAGCAG
CAGCTCGGCTTCGATTTGTGGTACATCTTTCTCGGCATATTCCTCCTTGCCGTGACAGAGGGTCCCAGCGTGGCA
GACTTGAATGATTCGGTAAAACTCACTATTCGTAGACTCTGGCTTCGTGTTAACCCCAGCTTCCAGCACATGAAA
ATCTTTCCCATCTTTTTCGAAGTAGTTTCTGCATACGCCAACGTAGGCATCAGTCTAGGCCACCCAAGCGTCAAC
TCGGCGCTGAGTACAAAGTTTTCCGTGGCGGGTAAACTCGTAGTCTGTGCCATGATGATTCGCGGCCGTCATCGT
GGCATGCCGCATGGCCTTGACCGTGCCATCATGTTGCCTGACGAGCATCTTGTTCTCGAGTCTCGGCGTGAATCC
TAG
Transcript >OphauB2|967
ATGCCGCGGCTAACGAGTCGCGAGAGAGACGAAATCGGCGGCGTCGAGTACCAGGCGCTCAAGCTGCTCCTCAAA
GTCATTACCGCCTACTTTTTCGGCATGCAGCTCCTTGGCGCACTCGGCCTGCTCGTCTGGATACATTTAGCCAAT
GCAAAGTATACAATACTCTTGGACTCTGTTCACCAAGACAAGACCTGGTGGGCCTTTTACACGTCGCAGTCTCTC
ATGGACAATCTCGGCTTCACCCTCACGCCCGACAACATGGTTCCCTTTTGCGATACCATTTGGCCGCTTCTGCTC
CTTAGCTTCGTCGCCTTGGCGGGCGAGACGCTCTACCCCGTCTTTTTGCGCTGCGTCATCTGGGCCATGGCGAGG
CTTGTGCCGCACACGTCGCCGCAGCGCCTGGCTCTGGCCTATCTTCTTGACCATCCGCGCCGGTGCTATACTCTC
CTCTTCCCCAGCGGCACCACCTGGGCCCTCTTTGCCATTATTGGCGCGCTCAACGTGATTGACACGGTGCTGATT
GTCGTGCTCGACTTGCACAATGCCGAGGTTGCCCACCTGAAGCTGGTGAATCGCTTCGTGTCTGCCTTTTTTCAG
GCAGTGGCGTCGCGGCATGCTGGCACCACGCCGTATAATTTGGATAAAGTGAGTCCGGCGGTGCAGTTTAGTCTG
CTCGTCATGATGTATATTTCTATATACCCCGTCGCCATGAGTATCCGCACGTCGAGCACTTACGAGCAGGGCTCC
GTCGGCGTCTGGGCTTGTCAAGAGGCGTATGACGAGCAGACAGCATCGACTTATCTCGTGCAGCATATCCAGCAG
CAGCTCGGCTTCGATTTGTGGTACATCTTTCTCGGCATATTCCTCCTTGCCGTGACAGAGGGTCCCAGCGTGGCA
GACTTGAATGATTCGGTAAAACTCACTATTCGTAGACTCTGGCTTCGTGTTAACCCCAGCTTCCAGCACATGAAA
ATCTTTCCCATCTTTTTCGAAGTAGTTTCTGCATACGCCAACGTAGGCATCAGTCTAGGCCACCCAAGCGTCAAC
TCGGCGCTGAGTACAAAGTTTTCCGTGGCGGGTAAACTCGTAGTCTGTGCCATGATGATTCGCGGCCGTCATCGT
GGCATGCCGCATGGCCTTGACCGTGCCATCATGTTGCCTGACGAGCATCTTGTTCTCGAGTCTCGGCGTGAATCC
TAG
Gene >OphauB2|967
ATGCCGCGGCTAACGAGTCGCGAGAGAGACGAAATCGGCGGCGTCGAGTACCAGGCGCTCAAGCTGCTCCTCAAA
GTCATTACCGGTCCGTCTTTGCTGGCACGCGGGATACCTAGCCCCCCAGACGTCTGTGAAGCTGACGAGGCGCGC
AAACAGCCTACTTTTTCGGCATGCAGCTCCTTGGCGCACTCGGCCTGCTCGTCTGGATACATTTAGCCAATGCAA
AGTATACAATACTCTTGGACTCTGTTCACCAAGACAAGACCTGGTGGTGAGTCCCCCCTTTTTTTTTCTTCTTTT
CCTTCCTCACCGTCTTGGACACGCATCGTTCAAACCTCGTCGTTCAAGGGCCTTTTACACGTCGCAGTCTCTCAT
GGACAATCTCGGCTTCACCCTCACGCCCGACAACATGGTTCCCTTTTGCGATACCATTTGGCCGCTTCTGCTCCT
TAGCTTCGTCGCCTTGGCGGGCGAGACGCTCTACCCCGTCTTTTTGCGCTGCGTCATCTGGGCCATGGCGAGGCT
TGTGCCGCACACGTCGCCGCAGCGCCTGGCTCTGGCCTATCTTCTTGACCATCCGCGCCGGTGCTATACTCTCCT
CTTCCCCAGCGGCACCACCTGGGCCCTCTTTGCCATTATTGGCGCGCTCAACGTGATTGACACGGTGCTGATTGT
CGTGCTCGACTTGCACAATGCCGAGGTTGCCCACCTGAAGCTGGTGAATCGCTTCGTGTCTGCCTTTTTTCAGGC
AGTGGCGTCGCGGCATGCTGGCACCACGCCGTATAATTTGGATAAAGTGAGTCCGGCGGTGCAGTTTAGTCTGCT
CGTCATGATGTATATTTCTATATACCCCGTCGCCATGAGTATCCGCACGTCGAGCACTTACGAGCAGGGCTCCGT
CGGCGTCTGGGCTTGTCAAGAGGCGTATGACGAGCAGACAGCATCGACTTATCTCGTGCAGCATATCCAGCAGCA
GCTCGGCTTCGATTTGTGGTACATCTTTCTCGGCATATTCCTCCTTGCCGTGACAGAGGGTCCCAGCGTGGCAGA
CTTGAATGATTCGGTAAAACTCACTATTCGTAGACTCTGGCTTCGTGTTAACCCCAGCTTCCAGCACATGAAAAT
CTTTCCCATCTTTTTCGAAGTAGTTTCTGCATAGTGAGTCTTGGGCATGAACTTTTTTTTGTTTTACTTCTCACC
CGTCTTGCATACCTTGGGCTGATTCTTTTTTTTTTTTTTGCTCTTCATACAGCGCCAACGTAGGCATCAGTCTAG
GCCACCCAAGCGTCAACTCGGCGCTGAGTACAAAGTTTTCCGTGGCGGGTAAACTCGTAGTCTGTGCCATGATGA
TTCGCGGCCGTCATCGTGGCATGCCGCATGGCCTTGACCGTGCCATCATGTTGCCTGACGAGCATCTTGTTCTCG
AGTCTCGGCGTGAATCCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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