Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|93
Gene name
LocationContig_1:232534..233580
Strand+
Gene length (bp)1046
Transcript length (bp)975
Coding sequence length (bp)975
Protein length (aa) 325

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10406 TAF8_C Transcription factor TFIID complex subunit 8 C-term 4.1E-18 187 235
PF07524 Bromo_TP Bromodomain associated 1.0E-12 60 132

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|O94706|TAF8_SCHPO Transcription initiation factor TFIID subunit 8 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=taf8 PE=3 SV=1 66 242 6.0E-11
sp|Q7ZYA2|TAF8_XENLA Transcription initiation factor TFIID subunit 8 OS=Xenopus laevis GN=taf8 PE=2 SV=1 63 255 3.0E-09
sp|Q28J24|TAF8_XENTR Transcription initiation factor TFIID subunit 8 OS=Xenopus tropicalis GN=taf8 PE=2 SV=1 63 255 4.0E-09
sp|Q03750|TAF8_YEAST Transcription initiation factor TFIID subunit 8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TAF8 PE=1 SV=1 30 238 4.0E-09
sp|Q6P0T2|TAF8_DANRE Transcription initiation factor TFIID subunit 8 OS=Danio rerio GN=taf8 PE=1 SV=1 37 254 2.0E-08
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[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|O94706|TAF8_SCHPO Transcription initiation factor TFIID subunit 8 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=taf8 PE=3 SV=1 66 242 6.0E-11
sp|Q7ZYA2|TAF8_XENLA Transcription initiation factor TFIID subunit 8 OS=Xenopus laevis GN=taf8 PE=2 SV=1 63 255 3.0E-09
sp|Q28J24|TAF8_XENTR Transcription initiation factor TFIID subunit 8 OS=Xenopus tropicalis GN=taf8 PE=2 SV=1 63 255 4.0E-09
sp|Q03750|TAF8_YEAST Transcription initiation factor TFIID subunit 8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TAF8 PE=1 SV=1 30 238 4.0E-09
sp|Q6P0T2|TAF8_DANRE Transcription initiation factor TFIID subunit 8 OS=Danio rerio GN=taf8 PE=1 SV=1 37 254 2.0E-08
sp|Q9EQH4|TAF8_MOUSE Transcription initiation factor TFIID subunit 8 OS=Mus musculus GN=Taf8 PE=2 SV=1 59 254 6.0E-08
sp|A7MAZ4|TAF8_BOVIN Transcription initiation factor TFIID subunit 8 OS=Bos taurus GN=TAF8 PE=2 SV=1 59 254 7.0E-08
sp|Q7Z7C8|TAF8_HUMAN Transcription initiation factor TFIID subunit 8 OS=Homo sapiens GN=TAF8 PE=1 SV=1 59 254 7.0E-08
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GO

(None)

SignalP

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SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Bromodomain transcription factor

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|93
MSTKRSISSHDSARASEAKRPRLEMPSRQVSLRSLPGAVDASSRLADAETEAQKHLKPHHIARCNLQRSLALALK
HVGFDTATPLAMDSFTNMVEEYMQHMVQELKAFSLTARREHPTPVDFGLTLNYFNLSTWTLRPHLKNPIPRSQLA
PRYVEIPLPDKAQEATAVLPLLTPHLSGKAEKEAQAYIPSFLPDFPSRHTYRFTPAENTSARDSKKVREEAARTA
QHGEDALRGLVRASKVRKRKEVKSLVERDSQGRERFRLWESCMRRFTSDCGDRGESSDRAAKHVEITEQSMIVNA
QATFSRKEVPRQNKRTVTGLSTGS*
Coding >OphauB2|93
ATGTCTACCAAGCGAAGCATATCCTCCCATGACTCGGCCCGCGCATCAGAGGCTAAGCGACCCCGATTGGAGATG
CCTTCAAGACAAGTCTCTTTACGCTCTCTACCTGGCGCTGTCGACGCCTCCTCGCGATTGGCCGATGCTGAAACG
GAAGCACAAAAACACCTAAAACCCCATCATATTGCTCGATGCAACCTTCAGCGGTCCTTGGCCTTGGCTCTCAAA
CACGTTGGCTTCGACACAGCAACCCCTCTGGCCATGGACAGCTTTACCAACATGGTTGAAGAATATATGCAACAC
ATGGTGCAAGAGCTCAAGGCCTTTTCTCTGACTGCCCGTCGCGAACATCCCACGCCTGTCGATTTTGGCCTCACC
CTCAACTATTTCAACCTGTCGACATGGACCCTACGCCCCCATCTCAAAAACCCAATACCTCGGAGCCAGCTAGCC
CCGCGCTACGTTGAAATCCCGCTCCCTGACAAAGCTCAAGAGGCCACGGCCGTGCTACCACTCCTGACACCACAT
CTCAGCGGCAAAGCAGAAAAGGAGGCTCAAGCATACATTCCCAGCTTTCTCCCCGACTTTCCCAGCCGCCACACC
TACCGCTTCACCCCCGCAGAAAACACGAGCGCCCGAGATTCGAAAAAAGTTCGCGAAGAGGCGGCTCGCACCGCA
CAGCATGGCGAAGATGCTCTGCGGGGCCTGGTACGTGCCTCCAAGGTTCGCAAGCGCAAGGAAGTCAAGTCGCTT
GTCGAGCGAGACTCGCAAGGTCGGGAGCGTTTCCGTCTATGGGAGTCTTGCATGCGTCGGTTTACTAGCGATTGT
GGAGACCGAGGTGAATCTAGCGACAGAGCCGCCAAGCACGTTGAGATTACCGAGCAAAGCATGATTGTCAATGCC
CAGGCCACGTTTTCGCGCAAAGAGGTACCACGCCAGAACAAGAGGACTGTGACGGGTTTGTCTACTGGGTCCTAG
Transcript >OphauB2|93
ATGTCTACCAAGCGAAGCATATCCTCCCATGACTCGGCCCGCGCATCAGAGGCTAAGCGACCCCGATTGGAGATG
CCTTCAAGACAAGTCTCTTTACGCTCTCTACCTGGCGCTGTCGACGCCTCCTCGCGATTGGCCGATGCTGAAACG
GAAGCACAAAAACACCTAAAACCCCATCATATTGCTCGATGCAACCTTCAGCGGTCCTTGGCCTTGGCTCTCAAA
CACGTTGGCTTCGACACAGCAACCCCTCTGGCCATGGACAGCTTTACCAACATGGTTGAAGAATATATGCAACAC
ATGGTGCAAGAGCTCAAGGCCTTTTCTCTGACTGCCCGTCGCGAACATCCCACGCCTGTCGATTTTGGCCTCACC
CTCAACTATTTCAACCTGTCGACATGGACCCTACGCCCCCATCTCAAAAACCCAATACCTCGGAGCCAGCTAGCC
CCGCGCTACGTTGAAATCCCGCTCCCTGACAAAGCTCAAGAGGCCACGGCCGTGCTACCACTCCTGACACCACAT
CTCAGCGGCAAAGCAGAAAAGGAGGCTCAAGCATACATTCCCAGCTTTCTCCCCGACTTTCCCAGCCGCCACACC
TACCGCTTCACCCCCGCAGAAAACACGAGCGCCCGAGATTCGAAAAAAGTTCGCGAAGAGGCGGCTCGCACCGCA
CAGCATGGCGAAGATGCTCTGCGGGGCCTGGTACGTGCCTCCAAGGTTCGCAAGCGCAAGGAAGTCAAGTCGCTT
GTCGAGCGAGACTCGCAAGGTCGGGAGCGTTTCCGTCTATGGGAGTCTTGCATGCGTCGGTTTACTAGCGATTGT
GGAGACCGAGGTGAATCTAGCGACAGAGCCGCCAAGCACGTTGAGATTACCGAGCAAAGCATGATTGTCAATGCC
CAGGCCACGTTTTCGCGCAAAGAGGTACCACGCCAGAACAAGAGGACTGTGACGGGTTTGTCTACTGGGTCCTAG
Gene >OphauB2|93
ATGTCTACCAAGCGAAGCATATCCTCCCATGACTCGGCCCGCGCATCAGAGGCTAAGCGACCCCGATTGGAGATG
CCTTCAAGACAAGTCTCTTTACGCTCTCTACCTGGCGCTGTCGACGCCTCCTCGCGATTGGCCGATGCTGAAACG
GAAGCACAAAAACACCTAAAACCCCATCATATTGCTCGATGCAACCTTCAGCGGTCCTTGGCCTTGGCTCTCAAA
CACGTTGGCTTCGACACAGCAACCCCTCTGGCCATGGACAGCTTTACCAACATGGTTGAAGAATGTAAGCAATAT
CCCCTTGCAGCTACAGCGATAATGACGATGCGGAAATGCCGATTGACACTGGTGCGCCAGATATGCAACACATGG
TGCAAGAGCTCAAGGCCTTTTCTCTGACTGCCCGTCGCGAACATCCCACGCCTGTCGATTTTGGCCTCACCCTCA
ACTATTTCAACCTGTCGACATGGACCCTACGCCCCCATCTCAAAAACCCAATACCTCGGAGCCAGCTAGCCCCGC
GCTACGTTGAAATCCCGCTCCCTGACAAAGCTCAAGAGGCCACGGCCGTGCTACCACTCCTGACACCACATCTCA
GCGGCAAAGCAGAAAAGGAGGCTCAAGCATACATTCCCAGCTTTCTCCCCGACTTTCCCAGCCGCCACACCTACC
GCTTCACCCCCGCAGAAAACACGAGCGCCCGAGATTCGAAAAAAGTTCGCGAAGAGGCGGCTCGCACCGCACAGC
ATGGCGAAGATGCTCTGCGGGGCCTGGTACGTGCCTCCAAGGTTCGCAAGCGCAAGGAAGTCAAGTCGCTTGTCG
AGCGAGACTCGCAAGGTCGGGAGCGTTTCCGTCTATGGGAGTCTTGCATGCGTCGGTTTACTAGCGATTGTGGAG
ACCGAGGTGAATCTAGCGACAGAGCCGCCAAGCACGTTGAGATTACCGAGCAAAGCATGATTGTCAATGCCCAGG
CCACGTTTTCGCGCAAAGAGGTACCACGCCAGAACAAGAGGACTGTGACGGGTTTGTCTACTGGGTCCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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