Protein ID | OphauB2|907 |
Gene name | |
Location | Contig_12:167159..168219 |
Strand | + |
Gene length (bp) | 1060 |
Transcript length (bp) | 933 |
Coding sequence length (bp) | 933 |
Protein length (aa) | 311 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF06966 | DUF1295 | Protein of unknown function (DUF1295) | 9.7E-33 | 79 | 237 |
PF06966 | DUF1295 | Protein of unknown function (DUF1295) | 1.2E-05 | 259 | 302 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 30 | 0.856625 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 15 | 37 | 22 |
2 | 44 | 66 | 22 |
3 | 88 | 110 | 22 |
4 | 130 | 152 | 22 |
5 | 162 | 184 | 22 |
Orthofinder run ID | 4 |
Orthogroup | 6457 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >OphauB2|907 MLDLLRLTSFRSPLLRTLVPSVAAAFALQACVAVPSVAAQSERFYDVSGSATVLAVGALSLYLPALRARAAGEPV QLAFWHMWRWWSLRQVLVTGLAAVWTLRLGSYLFARILAHGHDSRFDSLRSRPPAFFAAFMAQAAWVSAMLAPVI ALNAVPPSVAPALLVSDVLGLALWAAGFGLEVAADAQKSKWAQAKRRKEHDQDFLSSGLFAWCRFPNYLGEITLW SGIATIAAGALAQRPVQRALGFPSGPRGILATTALSFFSPVFSAYLITQVSGVPLTEQIYDERYGHRKDYKQWRH NTPRLLPKIF* |
Coding | >OphauB2|907 ATGCTTGACCTCTTGCGCCTAACCAGCTTCCGCTCCCCGCTGCTGCGCACACTGGTGCCCTCTGTGGCCGCAGCT TTTGCACTGCAAGCCTGCGTGGCGGTGCCCTCAGTGGCGGCGCAGTCGGAGCGCTTCTACGATGTATCGGGCTCG GCAACGGTGCTGGCAGTCGGGGCGCTGAGCCTATATCTTCCAGCGCTGCGGGCGCGCGCGGCCGGCGAGCCGGTG CAGCTGGCTTTCTGGCACATGTGGCGGTGGTGGAGCTTGAGACAGGTGCTTGTGACGGGCCTGGCGGCTGTGTGG ACCTTGCGCCTTGGCTCATATCTCTTTGCCCGCATCCTCGCCCACGGCCACGACTCGCGCTTCGACTCGCTGCGC TCTCGCCCGCCCGCCTTTTTCGCCGCCTTTATGGCCCAAGCCGCCTGGGTCTCGGCCATGCTGGCGCCCGTCATT GCCCTCAACGCCGTGCCGCCCAGCGTCGCCCCCGCCCTCCTCGTGTCAGACGTGCTTGGCCTGGCCCTCTGGGCA GCTGGCTTTGGGCTTGAAGTTGCTGCCGATGCGCAAAAGAGCAAATGGGCCCAGGCAAAGAGGCGCAAGGAGCAT GACCAAGACTTTTTGTCGAGCGGCTTGTTTGCTTGGTGTCGCTTCCCAAACTACCTGGGCGAAATCACCCTTTGG TCCGGTATTGCCACCATTGCCGCCGGCGCCCTCGCCCAGCGCCCTGTCCAGCGCGCCCTTGGCTTCCCCAGCGGC CCACGCGGCATTCTAGCCACTACGGCTCTCTCCTTTTTCAGCCCAGTCTTTTCCGCCTACCTCATTACTCAAGTC TCTGGAGTCCCGCTAACTGAGCAGATATATGATGAGCGCTACGGTCATCGCAAGGACTATAAGCAATGGCGACAT AATACGCCTCGGCTATTGCCCAAGATTTTCTGA |
Transcript | >OphauB2|907 ATGCTTGACCTCTTGCGCCTAACCAGCTTCCGCTCCCCGCTGCTGCGCACACTGGTGCCCTCTGTGGCCGCAGCT TTTGCACTGCAAGCCTGCGTGGCGGTGCCCTCAGTGGCGGCGCAGTCGGAGCGCTTCTACGATGTATCGGGCTCG GCAACGGTGCTGGCAGTCGGGGCGCTGAGCCTATATCTTCCAGCGCTGCGGGCGCGCGCGGCCGGCGAGCCGGTG CAGCTGGCTTTCTGGCACATGTGGCGGTGGTGGAGCTTGAGACAGGTGCTTGTGACGGGCCTGGCGGCTGTGTGG ACCTTGCGCCTTGGCTCATATCTCTTTGCCCGCATCCTCGCCCACGGCCACGACTCGCGCTTCGACTCGCTGCGC TCTCGCCCGCCCGCCTTTTTCGCCGCCTTTATGGCCCAAGCCGCCTGGGTCTCGGCCATGCTGGCGCCCGTCATT GCCCTCAACGCCGTGCCGCCCAGCGTCGCCCCCGCCCTCCTCGTGTCAGACGTGCTTGGCCTGGCCCTCTGGGCA GCTGGCTTTGGGCTTGAAGTTGCTGCCGATGCGCAAAAGAGCAAATGGGCCCAGGCAAAGAGGCGCAAGGAGCAT GACCAAGACTTTTTGTCGAGCGGCTTGTTTGCTTGGTGTCGCTTCCCAAACTACCTGGGCGAAATCACCCTTTGG TCCGGTATTGCCACCATTGCCGCCGGCGCCCTCGCCCAGCGCCCTGTCCAGCGCGCCCTTGGCTTCCCCAGCGGC CCACGCGGCATTCTAGCCACTACGGCTCTCTCCTTTTTCAGCCCAGTCTTTTCCGCCTACCTCATTACTCAAGTC TCTGGAGTCCCGCTAACTGAGCAGATATATGATGAGCGCTACGGTCATCGCAAGGACTATAAGCAATGGCGACAT AATACGCCTCGGCTATTGCCCAAGATTTTCTGA |
Gene | >OphauB2|907 ATGCTTGACCTCTTGCGCCTAACCAGCTTCCGCTCCCCGCTGCTGCGCACACTGGTGCCCTCTGTGGCCGCAGCT TTTGCACTGCAAGCCTGCGTGGCGGTGCCCTCAGTGGCGGCGCAGTCGGAGCGCTTCTACGATGTATCGGGCTCG GCAACGGTGCTGGCAGTCGGGGCGCTGAGCCTATATCTTCCAGCGCTGCGGGCGCGCGCGGCCGGCGAGCCGGTG CAGCTGGCTTTCTGGCACATGTGGCGGTGGTGGAGCTTGAGACAGGTGCTTGTGACGGGCCTGGCGGCTGTGTGG ACCTTGCGCCGTAAGTCGTCTGCATTGTGCCTCTTGGCCCATCAAACACACCCGTCTTGACCTTGGCCAGTTGGC TCATATCTCTTTGCCCGCATCCTCGCCCACGGCCACGACTCGCGCTTCGACTCGCTGCGCTCTCGCCCGCCCGCC TTTTTCGCCGCCTTTATGGCCCAAGCCGCCTGGGTCTCGGCCATGCTGGCGCCCGTCATTGCCCTCAACGCCGTG CCGCCCAGCGTCGCCCCCGCCCTCCTCGTGTCAGACGTGCTTGGCCTGGCCCTCTGGGCAGCTGGCTTTGGGCTT GAAGTTGCTGCCGATGCGCAAAAGAGCAAATGGGCCCAGGCAAAGAGGCGCAAGGAGCATGACCAAGACTTTTTG TCGAGCGGCTTGTTTGCTTGGTGGTGCGTCTGCTTCTCTTCCTTAGTCTTGGCCTGGCCATTTCTCTGCCATTGG CTGACTTGGACCCAGTCGCTTCCCAAACTACCTGGGCGAAATCACCCTTTGGTCCGGTATTGCCACCATTGCCGC CGGCGCCCTCGCCCAGCGCCCTGTCCAGCGCGCCCTTGGCTTCCCCAGCGGCCCACGCGGCATTCTAGCCACTAC GGCTCTCTCCTTTTTCAGCCCAGTCTTTTCCGCCTACCTCATTACTCAAGTCTCTGGAGTCCCGCTAACTGAGCA GATATATGATGAGCGCTACGGTCATCGCAAGGACTATAAGCAATGGCGACATAATACGCCTCGGCTATTGCCCAA GATTTTCTGA |