© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|828 |
| Gene name | |
| Location | Contig_118:42354..43309 |
| Strand | - |
| Gene length (bp) | 955 |
| Transcript length (bp) | 879 |
| Coding sequence length (bp) | 879 |
| Protein length (aa) | 293 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00722 | Glyco_hydro_16 | Glycosyl hydrolases family 16 | 1.9E-10 | 59 | 195 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P23904|GUB_PAEMA | Beta-glucanase OS=Paenibacillus macerans PE=1 SV=2 | 24 | 194 | 1.0E-08 |
| sp|Q53317|XYND_RUMFL | Xylanase/beta-glucanase OS=Ruminococcus flavefaciens GN=xynD PE=3 SV=2 | 69 | 193 | 7.0E-07 |
| sp|P37073|GUB_BREBE | Beta-glucanase OS=Brevibacillus brevis GN=bglBB PE=1 SV=1 | 6 | 193 | 3.0E-06 |
| sp|P27051|GUB_BACLI | Beta-glucanase OS=Bacillus licheniformis GN=bg1 PE=1 SV=1 | 70 | 217 | 4.0E-06 |
| sp|P04957|GUB_BACSU | Beta-glucanase OS=Bacillus subtilis (strain 168) GN=bglS PE=1 SV=2 | 70 | 194 | 6.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005975 | carbohydrate metabolic process | Yes |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | Yes |
| GO:0003824 | catalytic activity | No |
| GO:0044238 | primary metabolic process | No |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds | No |
| GO:0003674 | molecular_function | No |
| GO:0016787 | hydrolase activity | No |
| GO:0008152 | metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0071704 | organic substance metabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 54 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|828 MKEVGDDERWVRQEFDVSAAAGRGKYGKAFRADKVQIGGSGLELGVGSQLVQGEAVPVAEVDSARADVHWGSYRA GIKLTAVPGTCSAFFWYFNDTQEIDMEFLSHEYEARLGQWPVNLVVQSRKSQEAGYDARKTGLFRRVMLGFDPTA GFHEYRFDYLADRVVFYADGNKLADMAGGDLPSSPGHLVLQHWSNGNPLWSGGPPREEALMTVSYVKAYFNSTAS RPGRPGCVSDAVCRVEGVTAANASTGGAFLTDDGRRGGSRSGQQDSGAARQDVALVLLLALALMLLL* |
| Coding | >OphauB2|828 ATGAAGGAGGTTGGAGACGACGAGAGATGGGTGCGGCAAGAGTTTGACGTGTCGGCAGCAGCAGGACGAGGCAAG TATGGCAAGGCGTTTAGGGCAGACAAGGTGCAGATTGGGGGCTCGGGGCTGGAGCTGGGCGTGGGCAGCCAGCTG GTGCAAGGCGAGGCGGTGCCAGTGGCCGAAGTGGACTCTGCGCGGGCCGACGTGCACTGGGGCTCGTACCGGGCG GGCATCAAGTTGACGGCGGTGCCTGGGACATGCAGCGCCTTTTTCTGGTACTTCAACGACACGCAGGAAATCGAC ATGGAGTTTCTGTCGCACGAGTATGAGGCGCGTCTGGGCCAGTGGCCCGTCAACCTGGTGGTGCAGAGCCGCAAG TCGCAAGAGGCGGGCTACGATGCTCGCAAGACGGGCCTCTTTCGGCGCGTCATGCTGGGCTTCGACCCGACGGCT GGCTTCCACGAGTACCGCTTCGACTACCTGGCGGACCGCGTCGTCTTCTACGCCGACGGCAACAAGCTGGCCGAC ATGGCGGGCGGCGACTTGCCCTCGAGCCCGGGGCATTTGGTGCTGCAGCATTGGAGCAATGGAAACCCGCTGTGG TCGGGCGGGCCGCCACGCGAGGAGGCCCTCATGACTGTCAGCTACGTCAAGGCCTACTTCAACTCGACTGCCAGC AGACCTGGCCGCCCGGGGTGCGTGTCCGATGCTGTGTGTAGAGTCGAGGGCGTGACGGCGGCCAATGCCAGCACT GGCGGAGCCTTTTTGACAGATGATGGCAGACGGGGAGGGTCACGCAGCGGCCAACAAGACAGTGGCGCTGCCAGG CAAGACGTGGCCCTGGTGCTGCTCTTGGCCTTGGCCTTGATGCTCTTGCTCTAG |
| Transcript | >OphauB2|828 ATGAAGGAGGTTGGAGACGACGAGAGATGGGTGCGGCAAGAGTTTGACGTGTCGGCAGCAGCAGGACGAGGCAAG TATGGCAAGGCGTTTAGGGCAGACAAGGTGCAGATTGGGGGCTCGGGGCTGGAGCTGGGCGTGGGCAGCCAGCTG GTGCAAGGCGAGGCGGTGCCAGTGGCCGAAGTGGACTCTGCGCGGGCCGACGTGCACTGGGGCTCGTACCGGGCG GGCATCAAGTTGACGGCGGTGCCTGGGACATGCAGCGCCTTTTTCTGGTACTTCAACGACACGCAGGAAATCGAC ATGGAGTTTCTGTCGCACGAGTATGAGGCGCGTCTGGGCCAGTGGCCCGTCAACCTGGTGGTGCAGAGCCGCAAG TCGCAAGAGGCGGGCTACGATGCTCGCAAGACGGGCCTCTTTCGGCGCGTCATGCTGGGCTTCGACCCGACGGCT GGCTTCCACGAGTACCGCTTCGACTACCTGGCGGACCGCGTCGTCTTCTACGCCGACGGCAACAAGCTGGCCGAC ATGGCGGGCGGCGACTTGCCCTCGAGCCCGGGGCATTTGGTGCTGCAGCATTGGAGCAATGGAAACCCGCTGTGG TCGGGCGGGCCGCCACGCGAGGAGGCCCTCATGACTGTCAGCTACGTCAAGGCCTACTTCAACTCGACTGCCAGC AGACCTGGCCGCCCGGGGTGCGTGTCCGATGCTGTGTGTAGAGTCGAGGGCGTGACGGCGGCCAATGCCAGCACT GGCGGAGCCTTTTTGACAGATGATGGCAGACGGGGAGGGTCACGCAGCGGCCAACAAGACAGTGGCGCTGCCAGG CAAGACGTGGCCCTGGTGCTGCTCTTGGCCTTGGCCTTGATGCTCTTGCTCTAG |
| Gene | >OphauB2|828 ATGAAGGAGGTTGGAGACGACGAGAGATGGGTGCGGCAAGAGTTTGACGTGTCGGCAGCAGCAGGACGAGGCAAG TATGGCAAGGCGTTTAGGGCAGACAAGGTGCAGATTGGGGGCTCGGGGCTGGAGCTGGGCGTGGGCAGCCAGCTG GTGCAAGGCGAGGCGGTGCCAGTGGCCGAAGTGGACTCTGCGCGGGCCGACGTGCACTGGGGCTCGTACCGGGCG GGCATCAAGTTGACGGCGGTGCCTGGGACATGCAGCGCCTTTTTCTGGGTATGTTTTTGCAGAGGCCATTTGGCG GCTAGGATAAGTGGTATGCAGCAAGGGCTGACGCGGGCGGGGGGAGCAGTACTTCAACGACACGCAGGAAATCGA CATGGAGTTTCTGTCGCACGAGTATGAGGCGCGTCTGGGCCAGTGGCCCGTCAACCTGGTGGTGCAGAGCCGCAA GTCGCAAGAGGCGGGCTACGATGCTCGCAAGACGGGCCTCTTTCGGCGCGTCATGCTGGGCTTCGACCCGACGGC TGGCTTCCACGAGTACCGCTTCGACTACCTGGCGGACCGCGTCGTCTTCTACGCCGACGGCAACAAGCTGGCCGA CATGGCGGGCGGCGACTTGCCCTCGAGCCCGGGGCATTTGGTGCTGCAGCATTGGAGCAATGGAAACCCGCTGTG GTCGGGCGGGCCGCCACGCGAGGAGGCCCTCATGACTGTCAGCTACGTCAAGGCCTACTTCAACTCGACTGCCAG CAGACCTGGCCGCCCGGGGTGCGTGTCCGATGCTGTGTGTAGAGTCGAGGGCGTGACGGCGGCCAATGCCAGCAC TGGCGGAGCCTTTTTGACAGATGATGGCAGACGGGGAGGGTCACGCAGCGGCCAACAAGACAGTGGCGCTGCCAG GCAAGACGTGGCCCTGGTGCTGCTCTTGGCCTTGGCCTTGATGCTCTTGCTCTAG |