© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|8146 |
| Gene name | |
| Location | Contig_99:3985..5062 |
| Strand | - |
| Gene length (bp) | 1077 |
| Transcript length (bp) | 954 |
| Coding sequence length (bp) | 954 |
| Protein length (aa) | 318 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF04116 | FA_hydroxylase | Fatty acid hydroxylase | 7.0E-24 | 161 | 301 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q8J207|ERG3_LEPMC | Delta(7)-sterol 5(6)-desaturase OS=Leptosphaeria maculans GN=ERG3 PE=3 SV=1 | 61 | 306 | 8.0E-55 |
| sp|Q7SBB6|ERG3_NEUCR | Probable Delta(7)-sterol 5(6)-desaturase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=NCU06207 PE=3 SV=1 | 62 | 306 | 5.0E-49 |
| sp|Q754B9|ERG3_ASHGO | Delta(7)-sterol 5(6)-desaturase OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=ERG3 PE=3 SV=2 | 64 | 306 | 1.0E-45 |
| sp|O75845|SC5D_HUMAN | Lathosterol oxidase OS=Homo sapiens GN=SC5D PE=1 SV=2 | 61 | 308 | 8.0E-45 |
| sp|O88822|SC5D_MOUSE | Lathosterol oxidase OS=Mus musculus GN=Sc5d PE=2 SV=2 | 61 | 308 | 8.0E-44 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q8J207|ERG3_LEPMC | Delta(7)-sterol 5(6)-desaturase OS=Leptosphaeria maculans GN=ERG3 PE=3 SV=1 | 61 | 306 | 8.0E-55 |
| sp|Q7SBB6|ERG3_NEUCR | Probable Delta(7)-sterol 5(6)-desaturase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=NCU06207 PE=3 SV=1 | 62 | 306 | 5.0E-49 |
| sp|Q754B9|ERG3_ASHGO | Delta(7)-sterol 5(6)-desaturase OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=ERG3 PE=3 SV=2 | 64 | 306 | 1.0E-45 |
| sp|O75845|SC5D_HUMAN | Lathosterol oxidase OS=Homo sapiens GN=SC5D PE=1 SV=2 | 61 | 308 | 8.0E-45 |
| sp|O88822|SC5D_MOUSE | Lathosterol oxidase OS=Mus musculus GN=Sc5d PE=2 SV=2 | 61 | 308 | 8.0E-44 |
| sp|Q9EQS5|SC5D_RAT | Lathosterol oxidase OS=Rattus norvegicus GN=Sc5d PE=1 SV=1 | 61 | 308 | 7.0E-43 |
| sp|O94457|ERG31_SCHPO | Delta(7)-sterol 5(6)-desaturase erg31 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=erg31 PE=3 SV=1 | 63 | 317 | 6.0E-42 |
| sp|Q8NJ57|ERG3_CANDC | Delta(7)-sterol 5(6)-desaturase OS=Candida dubliniensis (strain CD36 / ATCC MYA-646 / CBS 7987 / NCPF 3949 / NRRL Y-17841) GN=ERG3 PE=3 SV=1 | 58 | 306 | 3.0E-38 |
| sp|O13666|ERG32_SCHPO | Delta(7)-sterol 5(6)-desaturase erg32 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=erg32 PE=3 SV=1 | 1 | 317 | 8.0E-38 |
| sp|O93875|ERG3_CANAX | Delta(7)-sterol 5(6)-desaturase OS=Candida albicans GN=ERG3 PE=3 SV=1 | 58 | 306 | 3.0E-37 |
| sp|P32353|ERG3_YEAST | Delta(7)-sterol 5(6)-desaturase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ERG3 PE=1 SV=1 | 1 | 317 | 4.0E-36 |
| sp|P50860|ERG3_CANGA | Delta(7)-sterol 5(6)-desaturase OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=ERG3 PE=3 SV=1 | 1 | 317 | 1.0E-34 |
| sp|Q39208|SC5D1_ARATH | Delta(7)-sterol-C5(6)-desaturase 1 OS=Arabidopsis thaliana GN=STE1 PE=1 SV=2 | 75 | 305 | 9.0E-10 |
| sp|Q9ZT29|SC5D_TOBAC | Delta(7)-sterol-C5(6)-desaturase OS=Nicotiana tabacum PE=2 SV=1 | 141 | 305 | 2.0E-07 |
| sp|Q9M883|SC5D2_ARATH | Putative Delta(7)-sterol-C5(6)-desaturase 2 OS=Arabidopsis thaliana GN=HDF7 PE=3 SV=1 | 75 | 317 | 3.0E-07 |
| sp|Q5ZLL6|MSMO1_CHICK | Methylsterol monooxygenase 1 OS=Gallus gallus GN=MSMO1 PE=2 SV=1 | 153 | 317 | 3.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016491 | oxidoreductase activity | Yes |
| GO:0008610 | lipid biosynthetic process | Yes |
| GO:0005506 | iron ion binding | Yes |
| GO:0008150 | biological_process | No |
| GO:0043169 | cation binding | No |
| GO:0046914 | transition metal ion binding | No |
| GO:0043167 | ion binding | No |
| GO:1901576 | organic substance biosynthetic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0003824 | catalytic activity | No |
| GO:0005488 | binding | No |
| GO:0008152 | metabolic process | No |
| GO:0003674 | molecular_function | No |
| GO:0006629 | lipid metabolic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0009058 | biosynthetic process | No |
| GO:0046872 | metal ion binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 64 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 72 | 94 | 22 |
| 2 | 120 | 142 | 22 |
| 3 | 152 | 174 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|8146 MEVVLDYVDAAVLDVVYESARQRIQLNFCPLLHDKAPSLESVGALRKLAANLCHLATDTDSWARHSMLRQSISIF LLTWLLPTFFYFFFGTICYYQNFDPSLKNHPKFQPCQVRREMVDSLLALFWGSVLTVPVLLAQIHGFSKIYQFGS ASWWYEVAQFPFFVLFSDTCMYWLHRIFHAPALFKLLHSKHHQYVIPTPFSAYAFDPLEAWIMSLPLYAFGFIWP MSDFAQLAVFCGTNVWTFLLRTTPHALYPLLAIPTCQMLMTLLADDNRDQFHTVHHKNINVNFGQYLPLWDRLGG TYRDPEIFLKPSLRSKR* |
| Coding | >OphauB2|8146 ATGGAGGTCGTCCTCGACTACGTGGATGCGGCCGTCTTGGATGTCGTCTACGAATCGGCTCGTCAGCGCATACAG CTCAACTTTTGTCCGCTTCTTCATGACAAGGCCCCGTCCTTGGAGTCTGTCGGGGCGCTTCGCAAACTAGCAGCC AATCTTTGCCATCTTGCCACAGACACGGACAGCTGGGCAAGGCATAGTATGCTGCGTCAGAGCATCAGCATCTTC CTCCTCACGTGGCTACTCCCTACTTTTTTTTACTTCTTCTTTGGCACCATCTGCTACTATCAAAACTTTGATCCA TCGTTAAAGAACCATCCCAAATTCCAGCCATGTCAGGTCCGCCGCGAGATGGTGGACTCACTGCTTGCCCTCTTT TGGGGCAGCGTCCTGACCGTCCCTGTCTTGTTGGCCCAGATCCACGGCTTTTCAAAAATATACCAGTTTGGTTCC GCAAGCTGGTGGTATGAGGTGGCGCAGTTTCCATTCTTCGTGCTCTTTAGTGATACCTGCATGTATTGGCTGCAT CGCATCTTCCACGCTCCTGCTTTATTCAAGTTGCTGCATAGCAAACATCACCAATATGTCATTCCCACTCCTTTC TCGGCCTATGCATTTGACCCGTTGGAAGCCTGGATTATGAGTCTGCCGCTTTACGCCTTTGGCTTCATTTGGCCC ATGTCGGACTTCGCGCAGTTGGCCGTTTTCTGCGGTACCAATGTGTGGACCTTCTTACTGCGTACGACACCACAT GCCCTTTATCCGCTGCTGGCGATTCCAACATGCCAAATGCTCATGACGTTGCTTGCAGACGATAATCGAGATCAG TTTCATACGGTACACCATAAGAACATCAACGTCAATTTCGGGCAGTATCTCCCTCTCTGGGACCGTCTGGGTGGA ACCTATCGGGATCCCGAGATATTCTTGAAGCCAAGTTTACGGTCCAAAAGATAG |
| Transcript | >OphauB2|8146 ATGGAGGTCGTCCTCGACTACGTGGATGCGGCCGTCTTGGATGTCGTCTACGAATCGGCTCGTCAGCGCATACAG CTCAACTTTTGTCCGCTTCTTCATGACAAGGCCCCGTCCTTGGAGTCTGTCGGGGCGCTTCGCAAACTAGCAGCC AATCTTTGCCATCTTGCCACAGACACGGACAGCTGGGCAAGGCATAGTATGCTGCGTCAGAGCATCAGCATCTTC CTCCTCACGTGGCTACTCCCTACTTTTTTTTACTTCTTCTTTGGCACCATCTGCTACTATCAAAACTTTGATCCA TCGTTAAAGAACCATCCCAAATTCCAGCCATGTCAGGTCCGCCGCGAGATGGTGGACTCACTGCTTGCCCTCTTT TGGGGCAGCGTCCTGACCGTCCCTGTCTTGTTGGCCCAGATCCACGGCTTTTCAAAAATATACCAGTTTGGTTCC GCAAGCTGGTGGTATGAGGTGGCGCAGTTTCCATTCTTCGTGCTCTTTAGTGATACCTGCATGTATTGGCTGCAT CGCATCTTCCACGCTCCTGCTTTATTCAAGTTGCTGCATAGCAAACATCACCAATATGTCATTCCCACTCCTTTC TCGGCCTATGCATTTGACCCGTTGGAAGCCTGGATTATGAGTCTGCCGCTTTACGCCTTTGGCTTCATTTGGCCC ATGTCGGACTTCGCGCAGTTGGCCGTTTTCTGCGGTACCAATGTGTGGACCTTCTTACTGCGTACGACACCACAT GCCCTTTATCCGCTGCTGGCGATTCCAACATGCCAAATGCTCATGACGTTGCTTGCAGACGATAATCGAGATCAG TTTCATACGGTACACCATAAGAACATCAACGTCAATTTCGGGCAGTATCTCCCTCTCTGGGACCGTCTGGGTGGA ACCTATCGGGATCCCGAGATATTCTTGAAGCCAAGTTTACGGTCCAAAAGATAG |
| Gene | >OphauB2|8146 ATGGAGGTCGTCCTCGACTACGTGGATGCGGCCGTCTTGGATGTCGTCTACGAATCGGCTCGTCAGCGCATACAG CTCAACTTTTGTCCGCTTCTTCATGACAAGGCCCCGTCCTTGGAGTCTGTCGGGGCGCTTCGCAAACTAGCAGCC AATCTTTGCCATCTTGCCACAGACACGGACAGCTGGGCAAGGCATAGTATGCTGCGTCAGAGCATCAGCATCTTC CTCCTCACGTGGTTTGTCCTCCTAGCTGGTGCGGGCTCTCCTTTTCTTCTTCTTCCCTTTTAACCCAGACCATTC AGGCTACTCCCTACTTTTTTTTACTTCTTCTTTGGCACCATCTGCTACTATCAAAACTTTGATCCATCGTTAAAG AACCATCCCAAATTCCAGCCATGTCAGGTCCGCCGCGAGATGGTGGACTCACTGCTTGCCCTCTTTTGGGGCAGC GTCCTGACCGTCCCTGTCTTGTTGGCCCAGATCCACGGCTTTTCAAAAATATACCAGTTTGGTTCCGCAAGCTGG TGGTATGAGGTGGCGCAGTTTCCATTCTTCGTGCTCTTTAGTGATACCTGCATGTATTGGCTGCATCGCATCTTC CACGCTCCTGCTTTATTCAAGTTGCTGCATAGCAAACATCACCAGTAAGACAGGGCTACCCTTGGCTTCGACTTC TCACCAAGTGACAATACCAAATCTAGATATGTCATTCCCACTCCTTTCTCGGCCTATGCATTTGACCCGTTGGAA GCCTGGATTATGAGTCTGCCGCTTTACGCCTTTGGCTTCATTTGGCCCATGTCGGACTTCGCGCAGTTGGCCGTT TTCTGCGGTACCAATGTGTGGACCTTCTTACTGCGTACGACACCACATGCCCTTTATCCGCTGCTGGCGATTCCA ACATGCCAAATGCTCATGACGTTGCTTGCAGACGATAATCGAGATCAGTTTCATACGGTACACCATAAGAACATC AACGTCAATTTCGGGCAGTATCTCCCTCTCTGGGACCGTCTGGGTGGAACCTATCGGGATCCCGAGATATTCTTG AAGCCAAGTTTACGGTCCAAAAGATAG |