Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|8110
Gene name
LocationContig_97:72066..73338
Strand+
Gene length (bp)1272
Transcript length (bp)1272
Coding sequence length (bp)1272
Protein length (aa) 424

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF14388 DUF4419 Domain of unknown function (DUF4419) 9.7E-91 89 389

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q5UQ60|YL662_MIMIV Uncharacterized protein L662 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L662 PE=4 SV=1 58 319 4.0E-17

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|8110
MRSSIVLALTGLLSLAAAKPQFLWLNKKLDYIPLDTTRAVQSGDELFRKSCPEEISPRLRVTPRLLNSSYDSIHT
QAFDRKQIYASSSSFVRGVIEAWSQHQHLSLRPDEVWFEILAQLNFYMTKNAETVRNLFVDHEGKEEIKVYYQPD
VTSDSLVQSFARNLKDRVKTDWLAEWVKPGFSTSSPEDDLTANIYMMGLMQTFFDFSGASLCGLPSIKLKGERQD
WVNLLGKLEHLREFGSEPTEYARVLQPILEGFVRTWDEPKSAATTEFWSNIVLGTQTAICGGTTRVNGWITGFYF
WKPKGDLFVTPEQRERLPGGSRLGNVKYVAVKIDQLPISYAKVPVKLENYPGLPGQQTAYLLAGNIGVFRTVNRA
QTAVSAEPMSGWYMYGPVDPKESLKTNPGNMDELTHIEVQFGKCAARY*
Coding >OphauB2|8110
ATGCGCAGTTCCATTGTCCTTGCCCTTACAGGGCTGCTCTCTCTCGCCGCAGCAAAGCCCCAGTTTCTGTGGCTC
AACAAGAAGCTCGACTACATCCCTCTTGACACGACGCGTGCCGTGCAATCGGGCGACGAGCTCTTCCGCAAGAGC
TGTCCCGAAGAAATCTCCCCCCGGCTTCGCGTTACCCCCCGCCTGCTCAACTCGTCCTACGATAGTATCCACACA
CAAGCCTTTGACAGGAAACAAATCTATGCCTCGTCGTCGAGCTTTGTGCGTGGCGTCATTGAGGCGTGGAGCCAG
CACCAGCATCTCTCTCTGCGTCCCGACGAGGTGTGGTTCGAGATTCTCGCCCAGCTAAACTTTTACATGACCAAG
AATGCCGAAACGGTCCGCAACCTCTTTGTCGACCACGAGGGCAAGGAAGAAATCAAGGTTTACTACCAGCCAGAT
GTTACCTCGGATTCCCTTGTACAAAGCTTTGCTAGAAACCTCAAGGACCGGGTTAAGACGGACTGGCTAGCCGAA
TGGGTCAAGCCTGGCTTCAGCACCAGCTCTCCTGAAGATGACCTCACTGCAAACATTTACATGATGGGCCTGATG
CAAACCTTTTTCGATTTCTCGGGCGCAAGTCTCTGCGGTCTCCCGTCCATCAAGCTTAAGGGAGAGAGGCAGGAC
TGGGTCAACCTGCTTGGCAAACTGGAGCATCTCAGGGAGTTTGGCAGCGAGCCGACAGAGTATGCCCGCGTGCTA
CAGCCCATCCTCGAAGGTTTTGTTCGCACCTGGGACGAGCCCAAATCTGCAGCCACGACGGAGTTTTGGTCCAAC
ATTGTCCTTGGCACGCAAACCGCAATTTGCGGCGGCACGACACGTGTCAATGGCTGGATTACCGGCTTCTACTTT
TGGAAACCCAAGGGCGACCTTTTCGTAACGCCCGAGCAGCGTGAGAGGCTTCCTGGAGGCTCCCGGCTCGGCAAT
GTCAAGTATGTTGCTGTCAAAATTGATCAGCTGCCCATCAGCTACGCCAAGGTGCCTGTCAAGCTGGAAAACTAC
CCCGGCTTGCCAGGCCAGCAAACTGCCTACTTGTTGGCGGGCAACATTGGCGTCTTCCGCACCGTTAACCGGGCG
CAAACCGCCGTGAGTGCTGAGCCCATGAGCGGGTGGTACATGTATGGCCCGGTGGATCCCAAGGAGAGCTTGAAG
ACCAATCCAGGCAACATGGATGAACTTACCCATATCGAGGTGCAGTTTGGAAAGTGCGCGGCGCGGTACTGA
Transcript >OphauB2|8110
ATGCGCAGTTCCATTGTCCTTGCCCTTACAGGGCTGCTCTCTCTCGCCGCAGCAAAGCCCCAGTTTCTGTGGCTC
AACAAGAAGCTCGACTACATCCCTCTTGACACGACGCGTGCCGTGCAATCGGGCGACGAGCTCTTCCGCAAGAGC
TGTCCCGAAGAAATCTCCCCCCGGCTTCGCGTTACCCCCCGCCTGCTCAACTCGTCCTACGATAGTATCCACACA
CAAGCCTTTGACAGGAAACAAATCTATGCCTCGTCGTCGAGCTTTGTGCGTGGCGTCATTGAGGCGTGGAGCCAG
CACCAGCATCTCTCTCTGCGTCCCGACGAGGTGTGGTTCGAGATTCTCGCCCAGCTAAACTTTTACATGACCAAG
AATGCCGAAACGGTCCGCAACCTCTTTGTCGACCACGAGGGCAAGGAAGAAATCAAGGTTTACTACCAGCCAGAT
GTTACCTCGGATTCCCTTGTACAAAGCTTTGCTAGAAACCTCAAGGACCGGGTTAAGACGGACTGGCTAGCCGAA
TGGGTCAAGCCTGGCTTCAGCACCAGCTCTCCTGAAGATGACCTCACTGCAAACATTTACATGATGGGCCTGATG
CAAACCTTTTTCGATTTCTCGGGCGCAAGTCTCTGCGGTCTCCCGTCCATCAAGCTTAAGGGAGAGAGGCAGGAC
TGGGTCAACCTGCTTGGCAAACTGGAGCATCTCAGGGAGTTTGGCAGCGAGCCGACAGAGTATGCCCGCGTGCTA
CAGCCCATCCTCGAAGGTTTTGTTCGCACCTGGGACGAGCCCAAATCTGCAGCCACGACGGAGTTTTGGTCCAAC
ATTGTCCTTGGCACGCAAACCGCAATTTGCGGCGGCACGACACGTGTCAATGGCTGGATTACCGGCTTCTACTTT
TGGAAACCCAAGGGCGACCTTTTCGTAACGCCCGAGCAGCGTGAGAGGCTTCCTGGAGGCTCCCGGCTCGGCAAT
GTCAAGTATGTTGCTGTCAAAATTGATCAGCTGCCCATCAGCTACGCCAAGGTGCCTGTCAAGCTGGAAAACTAC
CCCGGCTTGCCAGGCCAGCAAACTGCCTACTTGTTGGCGGGCAACATTGGCGTCTTCCGCACCGTTAACCGGGCG
CAAACCGCCGTGAGTGCTGAGCCCATGAGCGGGTGGTACATGTATGGCCCGGTGGATCCCAAGGAGAGCTTGAAG
ACCAATCCAGGCAACATGGATGAACTTACCCATATCGAGGTGCAGTTTGGAAAGTGCGCGGCGCGGTACTGA
Gene >OphauB2|8110
ATGCGCAGTTCCATTGTCCTTGCCCTTACAGGGCTGCTCTCTCTCGCCGCAGCAAAGCCCCAGTTTCTGTGGCTC
AACAAGAAGCTCGACTACATCCCTCTTGACACGACGCGTGCCGTGCAATCGGGCGACGAGCTCTTCCGCAAGAGC
TGTCCCGAAGAAATCTCCCCCCGGCTTCGCGTTACCCCCCGCCTGCTCAACTCGTCCTACGATAGTATCCACACA
CAAGCCTTTGACAGGAAACAAATCTATGCCTCGTCGTCGAGCTTTGTGCGTGGCGTCATTGAGGCGTGGAGCCAG
CACCAGCATCTCTCTCTGCGTCCCGACGAGGTGTGGTTCGAGATTCTCGCCCAGCTAAACTTTTACATGACCAAG
AATGCCGAAACGGTCCGCAACCTCTTTGTCGACCACGAGGGCAAGGAAGAAATCAAGGTTTACTACCAGCCAGAT
GTTACCTCGGATTCCCTTGTACAAAGCTTTGCTAGAAACCTCAAGGACCGGGTTAAGACGGACTGGCTAGCCGAA
TGGGTCAAGCCTGGCTTCAGCACCAGCTCTCCTGAAGATGACCTCACTGCAAACATTTACATGATGGGCCTGATG
CAAACCTTTTTCGATTTCTCGGGCGCAAGTCTCTGCGGTCTCCCGTCCATCAAGCTTAAGGGAGAGAGGCAGGAC
TGGGTCAACCTGCTTGGCAAACTGGAGCATCTCAGGGAGTTTGGCAGCGAGCCGACAGAGTATGCCCGCGTGCTA
CAGCCCATCCTCGAAGGTTTTGTTCGCACCTGGGACGAGCCCAAATCTGCAGCCACGACGGAGTTTTGGTCCAAC
ATTGTCCTTGGCACGCAAACCGCAATTTGCGGCGGCACGACACGTGTCAATGGCTGGATTACCGGCTTCTACTTT
TGGAAACCCAAGGGCGACCTTTTCGTAACGCCCGAGCAGCGTGAGAGGCTTCCTGGAGGCTCCCGGCTCGGCAAT
GTCAAGTATGTTGCTGTCAAAATTGATCAGCTGCCCATCAGCTACGCCAAGGTGCCTGTCAAGCTGGAAAACTAC
CCCGGCTTGCCAGGCCAGCAAACTGCCTACTTGTTGGCGGGCAACATTGGCGTCTTCCGCACCGTTAACCGGGCG
CAAACCGCCGTGAGTGCTGAGCCCATGAGCGGGTGGTACATGTATGGCCCGGTGGATCCCAAGGAGAGCTTGAAG
ACCAATCCAGGCAACATGGATGAACTTACCCATATCGAGGTGCAGTTTGGAAAGTGCGCGGCGCGGTACTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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