Protein ID | OphauB2|8109 |
Gene name | |
Location | Contig_97:67937..70578 |
Strand | - |
Gene length (bp) | 2641 |
Transcript length (bp) | 2565 |
Coding sequence length (bp) | 2565 |
Protein length (aa) | 855 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q9JM99|PRG4_MOUSE | Proteoglycan 4 OS=Mus musculus GN=Prg4 PE=1 SV=2 | 332 | 452 | 2.0E-13 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 21 | 0.995229 |
Gene cluster ID | Type of secondary metabolism gene |
---|---|
Cluster 38 | (None) |
Orthofinder run ID | 4 |
Orthogroup | 2728 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >OphauB2|8109 MVTVNRFVTAAVLACAWGAAGKESEKPVKGLGLDNGSNGVASSVHGLVQAANPAFQVNDGSYLTRRQSDDDDPFG ESSEDEESDDDPFATGNEAPRPPSRPNPVAEAPKEDKPKEEERPKGQSAFFPSTGNSQPTTPEEEDKPKEEEKPK GQSAFFPATGNSQPATPEDEEKPKEEEKPEEESAFTSIGNSQSATPEEEKPKEEEKPKEESAFTSIGNSQPVTPK EEKPKEEEKPKEEEKPKEESAFTSVGNSQPATPKEEKPKEEEKPKEEEKPKEESAFTSVGNSQPATPQDEEKPKE EEKPKEESAFTSVGNSQSASSSEPKEEEAPKKEEMPTNSKEEEPTTSKEEEPTTSKEEEKSTTPKEEEKSTTPKE EEEPATSKEEEPTTSKEEEESTTPKEEEEPATSKEEEPTTSKEEEESTTPKEEEEPATSEEEEPTTPKEEEPTTS KEEEKPATSSKPAELPKPVTLSKSIRVLEPTSKSSQSAQPAATSSLGKTSQAAAATSSVKSIPTSSFKTLAATAD DKVGENGAKTTPASSNDMATVVVDSVMSKVTGCPASTSCAGDVYTTKTVPVYTVICPQDMLDVFIKPTAAPDASG SDKPNASSPDASSPQPAAVPGTAGKDVSQINISATVIIIYTVTSCPQANGQCALGSTMTKEVPVNYRPAEKKDLT ITLEYSEGCVNISDVAKIESSSGNNTVSSNEPGPDNVNQPRPAGQTTPAGGEGLDNGSGAPSGPQGDATADNDEP CPTCTGSGNTSSDNVSQGDATINKPCPTCTGTGNTGSDNASQGDANPNTQPHDSPKTPTGPKSSDTESQGDASIP ASPAVKTSGTGRSGTLKCMRARAVSNAGA* |
Coding | >OphauB2|8109 ATGGTTACCGTCAATCGCTTCGTCACCGCAGCTGTCCTGGCCTGTGCCTGGGGCGCTGCTGGAAAGGAATCCGAA AAGCCAGTAAAAGGCCTAGGCCTCGACAATGGCAGCAATGGTGTCGCCAGCTCCGTCCACGGGCTTGTTCAGGCC GCCAACCCTGCGTTTCAAGTCAACGACGGCAGCTATCTCACCCGCCGACAGTCTGACGACGACGACCCGTTTGGA GAGTCTTCTGAAGACGAAGAGTCTGATGATGACCCGTTTGCAACGGGGAATGAAGCCCCGCGGCCTCCCTCGAGG CCTAACCCAGTGGCAGAGGCCCCCAAGGAAGACAAGCCTAAGGAGGAAGAAAGGCCCAAGGGACAGTCTGCCTTT TTCCCTTCGACGGGAAATTCACAGCCCACGACTCCCGAGGAGGAAGACAAGCCTAAGGAGGAAGAAAAGCCCAAG GGACAGTCTGCCTTTTTCCCTGCGACGGGAAATTCGCAGCCCGCCACTCCCGAGGATGAAGAAAAGCCTAAAGAG GAAGAAAAGCCCGAGGAAGAGTCCGCCTTTACTTCGATAGGAAACTCCCAGTCCGCGACTCCTGAGGAAGAAAAG CCCAAGGAGGAAGAAAAGCCTAAGGAAGAGTCTGCCTTTACTTCGATAGGAAACTCCCAGCCCGTGACTCCTAAG GAAGAAAAGCCTAAAGAGGAAGAAAAGCCCAAGGAGGAAGAAAAGCCCAAGGAAGAGTCTGCCTTTACTTCGGTA GGAAACTCCCAGCCCGCGACTCCTAAGGAAGAAAAGCCTAAAGAGGAAGAAAAGCCCAAGGAGGAAGAAAAGCCT AAGGAAGAGTCTGCCTTTACTTCGGTAGGAAACTCCCAGCCCGCGACTCCTCAGGATGAAGAGAAGCCCAAGGAG GAAGAAAAGCCCAAGGAAGAGTCTGCCTTTACTTCGGTAGGAAACTCCCAGTCCGCTAGCTCCTCGGAGCCTAAG GAAGAAGAAGCTCCCAAGAAAGAGGAGATGCCTACGAATTCTAAGGAGGAAGAGCCTACGACTTCTAAGGAGGAA GAGCCTACGACTTCCAAGGAAGAGGAGAAGTCTACGACTCCCAAGGAAGAGGAGAAGTCTACGACTCCCAAGGAA GAGGAGGAGCCTGCGACTTCTAAGGAGGAAGAGCCTACGACTTCCAAGGAAGAGGAGGAGTCTACGACTCCCAAG GAAGAAGAGGAGCCTGCGACTTCTAAGGAGGAAGAGCCTACGACTTCCAAGGAAGAGGAGGAGTCTACGACTCCC AAGGAAGAGGAGGAGCCTGCCACTTCTGAGGAGGAAGAGCCTACGACTCCTAAGGAGGAAGAGCCTACGACTTCC AAGGAAGAGGAGAAGCCTGCCACTTCCTCCAAGCCGGCCGAGCTTCCCAAGCCCGTCACGCTGTCAAAGTCAATC AGGGTTTTGGAGCCCACCTCCAAGTCCAGCCAGTCTGCCCAGCCAGCCGCCACCTCTAGCCTCGGCAAGACGTCC CAGGCAGCAGCAGCCACAAGCTCCGTCAAGAGCATCCCCACCAGCAGCTTCAAGACGCTCGCTGCTACTGCGGAT GACAAGGTTGGCGAGAATGGCGCAAAAACCACGCCCGCCTCTTCCAACGACATGGCGACTGTTGTGGTTGACAGC GTAATGAGCAAAGTGACTGGCTGCCCTGCCTCGACGAGCTGCGCCGGCGACGTCTACACCACCAAGACTGTTCCA GTATACACTGTTATTTGCCCACAAGACATGCTGGATGTCTTTATCAAGCCCACGGCCGCCCCCGACGCAAGTGGC AGTGACAAGCCCAACGCTTCTTCTCCCGACGCTTCTTCCCCTCAGCCTGCCGCCGTCCCTGGCACCGCTGGCAAG GACGTGTCGCAGATTAACATTAGCGCCACTGTCATCATTATTTACACCGTCACGAGCTGCCCCCAGGCCAACGGA CAGTGCGCACTTGGTAGCACCATGACCAAGGAGGTGCCTGTAAACTACCGCCCTGCCGAGAAGAAGGATCTTACA ATCACGCTCGAGTATAGCGAGGGCTGCGTCAATATTTCCGACGTGGCCAAGATTGAGTCGTCGTCTGGCAACAAC ACGGTTTCCAGCAACGAGCCCGGACCTGACAATGTCAACCAGCCTCGTCCTGCTGGCCAAACGACTCCTGCGGGT GGCGAGGGTTTGGATAACGGCTCTGGTGCCCCCTCTGGACCCCAGGGAGATGCTACCGCTGACAATGATGAGCCT TGCCCTACCTGCACTGGCTCTGGCAACACGAGCTCGGACAATGTATCCCAAGGAGACGCCACCATCAATAAGCCT TGCCCTACTTGCACTGGCACTGGCAACACGGGCTCAGACAATGCATCTCAAGGAGACGCCAACCCCAACACCCAG CCCCATGATAGCCCCAAGACTCCCACGGGTCCCAAGAGCTCAGACACTGAATCCCAGGGCGACGCGTCCATTCCT GCTTCCCCCGCCGTCAAGACGTCTGGAACTGGCCGCTCGGGCACTCTCAAGTGCATGCGCGCCAGGGCGGTTTCC AATGCTGGCGCTTAA |
Transcript | >OphauB2|8109 ATGGTTACCGTCAATCGCTTCGTCACCGCAGCTGTCCTGGCCTGTGCCTGGGGCGCTGCTGGAAAGGAATCCGAA AAGCCAGTAAAAGGCCTAGGCCTCGACAATGGCAGCAATGGTGTCGCCAGCTCCGTCCACGGGCTTGTTCAGGCC GCCAACCCTGCGTTTCAAGTCAACGACGGCAGCTATCTCACCCGCCGACAGTCTGACGACGACGACCCGTTTGGA GAGTCTTCTGAAGACGAAGAGTCTGATGATGACCCGTTTGCAACGGGGAATGAAGCCCCGCGGCCTCCCTCGAGG CCTAACCCAGTGGCAGAGGCCCCCAAGGAAGACAAGCCTAAGGAGGAAGAAAGGCCCAAGGGACAGTCTGCCTTT TTCCCTTCGACGGGAAATTCACAGCCCACGACTCCCGAGGAGGAAGACAAGCCTAAGGAGGAAGAAAAGCCCAAG GGACAGTCTGCCTTTTTCCCTGCGACGGGAAATTCGCAGCCCGCCACTCCCGAGGATGAAGAAAAGCCTAAAGAG GAAGAAAAGCCCGAGGAAGAGTCCGCCTTTACTTCGATAGGAAACTCCCAGTCCGCGACTCCTGAGGAAGAAAAG CCCAAGGAGGAAGAAAAGCCTAAGGAAGAGTCTGCCTTTACTTCGATAGGAAACTCCCAGCCCGTGACTCCTAAG GAAGAAAAGCCTAAAGAGGAAGAAAAGCCCAAGGAGGAAGAAAAGCCCAAGGAAGAGTCTGCCTTTACTTCGGTA GGAAACTCCCAGCCCGCGACTCCTAAGGAAGAAAAGCCTAAAGAGGAAGAAAAGCCCAAGGAGGAAGAAAAGCCT AAGGAAGAGTCTGCCTTTACTTCGGTAGGAAACTCCCAGCCCGCGACTCCTCAGGATGAAGAGAAGCCCAAGGAG GAAGAAAAGCCCAAGGAAGAGTCTGCCTTTACTTCGGTAGGAAACTCCCAGTCCGCTAGCTCCTCGGAGCCTAAG GAAGAAGAAGCTCCCAAGAAAGAGGAGATGCCTACGAATTCTAAGGAGGAAGAGCCTACGACTTCTAAGGAGGAA GAGCCTACGACTTCCAAGGAAGAGGAGAAGTCTACGACTCCCAAGGAAGAGGAGAAGTCTACGACTCCCAAGGAA GAGGAGGAGCCTGCGACTTCTAAGGAGGAAGAGCCTACGACTTCCAAGGAAGAGGAGGAGTCTACGACTCCCAAG GAAGAAGAGGAGCCTGCGACTTCTAAGGAGGAAGAGCCTACGACTTCCAAGGAAGAGGAGGAGTCTACGACTCCC AAGGAAGAGGAGGAGCCTGCCACTTCTGAGGAGGAAGAGCCTACGACTCCTAAGGAGGAAGAGCCTACGACTTCC AAGGAAGAGGAGAAGCCTGCCACTTCCTCCAAGCCGGCCGAGCTTCCCAAGCCCGTCACGCTGTCAAAGTCAATC AGGGTTTTGGAGCCCACCTCCAAGTCCAGCCAGTCTGCCCAGCCAGCCGCCACCTCTAGCCTCGGCAAGACGTCC CAGGCAGCAGCAGCCACAAGCTCCGTCAAGAGCATCCCCACCAGCAGCTTCAAGACGCTCGCTGCTACTGCGGAT GACAAGGTTGGCGAGAATGGCGCAAAAACCACGCCCGCCTCTTCCAACGACATGGCGACTGTTGTGGTTGACAGC GTAATGAGCAAAGTGACTGGCTGCCCTGCCTCGACGAGCTGCGCCGGCGACGTCTACACCACCAAGACTGTTCCA GTATACACTGTTATTTGCCCACAAGACATGCTGGATGTCTTTATCAAGCCCACGGCCGCCCCCGACGCAAGTGGC AGTGACAAGCCCAACGCTTCTTCTCCCGACGCTTCTTCCCCTCAGCCTGCCGCCGTCCCTGGCACCGCTGGCAAG GACGTGTCGCAGATTAACATTAGCGCCACTGTCATCATTATTTACACCGTCACGAGCTGCCCCCAGGCCAACGGA CAGTGCGCACTTGGTAGCACCATGACCAAGGAGGTGCCTGTAAACTACCGCCCTGCCGAGAAGAAGGATCTTACA ATCACGCTCGAGTATAGCGAGGGCTGCGTCAATATTTCCGACGTGGCCAAGATTGAGTCGTCGTCTGGCAACAAC ACGGTTTCCAGCAACGAGCCCGGACCTGACAATGTCAACCAGCCTCGTCCTGCTGGCCAAACGACTCCTGCGGGT GGCGAGGGTTTGGATAACGGCTCTGGTGCCCCCTCTGGACCCCAGGGAGATGCTACCGCTGACAATGATGAGCCT TGCCCTACCTGCACTGGCTCTGGCAACACGAGCTCGGACAATGTATCCCAAGGAGACGCCACCATCAATAAGCCT TGCCCTACTTGCACTGGCACTGGCAACACGGGCTCAGACAATGCATCTCAAGGAGACGCCAACCCCAACACCCAG CCCCATGATAGCCCCAAGACTCCCACGGGTCCCAAGAGCTCAGACACTGAATCCCAGGGCGACGCGTCCATTCCT GCTTCCCCCGCCGTCAAGACGTCTGGAACTGGCCGCTCGGGCACTCTCAAGTGCATGCGCGCCAGGGCGGTTTCC AATGCTGGCGCTTAA |
Gene | >OphauB2|8109 ATGGTTACCGTCAATCGCTTCGTCACCGCAGCTGTCCTGGCCTGTGCCTGGGGCGCTGCTGGAAAGGAATCCGAA AAGCCAGTAAAAGGCCTAGGCCTCGACAATGCAAGTCTTGCCCCCTTCATTGCTATACAAGTAAAAACAAAATAA AAAAAGAAGGACTAACACAGCCATGGTGTAGGGCAGCAATGGTGTCGCCAGCTCCGTCCACGGGCTTGTTCAGGC CGCCAACCCTGCGTTTCAAGTCAACGACGGCAGCTATCTCACCCGCCGACAGTCTGACGACGACGACCCGTTTGG AGAGTCTTCTGAAGACGAAGAGTCTGATGATGACCCGTTTGCAACGGGGAATGAAGCCCCGCGGCCTCCCTCGAG GCCTAACCCAGTGGCAGAGGCCCCCAAGGAAGACAAGCCTAAGGAGGAAGAAAGGCCCAAGGGACAGTCTGCCTT TTTCCCTTCGACGGGAAATTCACAGCCCACGACTCCCGAGGAGGAAGACAAGCCTAAGGAGGAAGAAAAGCCCAA GGGACAGTCTGCCTTTTTCCCTGCGACGGGAAATTCGCAGCCCGCCACTCCCGAGGATGAAGAAAAGCCTAAAGA GGAAGAAAAGCCCGAGGAAGAGTCCGCCTTTACTTCGATAGGAAACTCCCAGTCCGCGACTCCTGAGGAAGAAAA GCCCAAGGAGGAAGAAAAGCCTAAGGAAGAGTCTGCCTTTACTTCGATAGGAAACTCCCAGCCCGTGACTCCTAA GGAAGAAAAGCCTAAAGAGGAAGAAAAGCCCAAGGAGGAAGAAAAGCCCAAGGAAGAGTCTGCCTTTACTTCGGT AGGAAACTCCCAGCCCGCGACTCCTAAGGAAGAAAAGCCTAAAGAGGAAGAAAAGCCCAAGGAGGAAGAAAAGCC TAAGGAAGAGTCTGCCTTTACTTCGGTAGGAAACTCCCAGCCCGCGACTCCTCAGGATGAAGAGAAGCCCAAGGA GGAAGAAAAGCCCAAGGAAGAGTCTGCCTTTACTTCGGTAGGAAACTCCCAGTCCGCTAGCTCCTCGGAGCCTAA GGAAGAAGAAGCTCCCAAGAAAGAGGAGATGCCTACGAATTCTAAGGAGGAAGAGCCTACGACTTCTAAGGAGGA AGAGCCTACGACTTCCAAGGAAGAGGAGAAGTCTACGACTCCCAAGGAAGAGGAGAAGTCTACGACTCCCAAGGA AGAGGAGGAGCCTGCGACTTCTAAGGAGGAAGAGCCTACGACTTCCAAGGAAGAGGAGGAGTCTACGACTCCCAA GGAAGAAGAGGAGCCTGCGACTTCTAAGGAGGAAGAGCCTACGACTTCCAAGGAAGAGGAGGAGTCTACGACTCC CAAGGAAGAGGAGGAGCCTGCCACTTCTGAGGAGGAAGAGCCTACGACTCCTAAGGAGGAAGAGCCTACGACTTC CAAGGAAGAGGAGAAGCCTGCCACTTCCTCCAAGCCGGCCGAGCTTCCCAAGCCCGTCACGCTGTCAAAGTCAAT CAGGGTTTTGGAGCCCACCTCCAAGTCCAGCCAGTCTGCCCAGCCAGCCGCCACCTCTAGCCTCGGCAAGACGTC CCAGGCAGCAGCAGCCACAAGCTCCGTCAAGAGCATCCCCACCAGCAGCTTCAAGACGCTCGCTGCTACTGCGGA TGACAAGGTTGGCGAGAATGGCGCAAAAACCACGCCCGCCTCTTCCAACGACATGGCGACTGTTGTGGTTGACAG CGTAATGAGCAAAGTGACTGGCTGCCCTGCCTCGACGAGCTGCGCCGGCGACGTCTACACCACCAAGACTGTTCC AGTATACACTGTTATTTGCCCACAAGACATGCTGGATGTCTTTATCAAGCCCACGGCCGCCCCCGACGCAAGTGG CAGTGACAAGCCCAACGCTTCTTCTCCCGACGCTTCTTCCCCTCAGCCTGCCGCCGTCCCTGGCACCGCTGGCAA GGACGTGTCGCAGATTAACATTAGCGCCACTGTCATCATTATTTACACCGTCACGAGCTGCCCCCAGGCCAACGG ACAGTGCGCACTTGGTAGCACCATGACCAAGGAGGTGCCTGTAAACTACCGCCCTGCCGAGAAGAAGGATCTTAC AATCACGCTCGAGTATAGCGAGGGCTGCGTCAATATTTCCGACGTGGCCAAGATTGAGTCGTCGTCTGGCAACAA CACGGTTTCCAGCAACGAGCCCGGACCTGACAATGTCAACCAGCCTCGTCCTGCTGGCCAAACGACTCCTGCGGG TGGCGAGGGTTTGGATAACGGCTCTGGTGCCCCCTCTGGACCCCAGGGAGATGCTACCGCTGACAATGATGAGCC TTGCCCTACCTGCACTGGCTCTGGCAACACGAGCTCGGACAATGTATCCCAAGGAGACGCCACCATCAATAAGCC TTGCCCTACTTGCACTGGCACTGGCAACACGGGCTCAGACAATGCATCTCAAGGAGACGCCAACCCCAACACCCA GCCCCATGATAGCCCCAAGACTCCCACGGGTCCCAAGAGCTCAGACACTGAATCCCAGGGCGACGCGTCCATTCC TGCTTCCCCCGCCGTCAAGACGTCTGGAACTGGCCGCTCGGGCACTCTCAAGTGCATGCGCGCCAGGGCGGTTTC CAATGCTGGCGCTTAA |