© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|8027 |
| Gene name | |
| Location | Contig_94:52701..54553 |
| Strand | + |
| Gene length (bp) | 1852 |
| Transcript length (bp) | 1212 |
| Coding sequence length (bp) | 1212 |
| Protein length (aa) | 404 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00106 | adh_short | short chain dehydrogenase | 2.3E-18 | 76 | 230 |
| PF13561 | adh_short_C2 | Enoyl-(Acyl carrier protein) reductase | 1.2E-13 | 106 | 230 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9P324|YI78_SCHPO | Uncharacterized oxidoreductase C977.08/C1348.09 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC977.08 PE=3 SV=1 | 107 | 230 | 1.0E-13 |
| sp|Q9NYR8|RDH8_HUMAN | Retinol dehydrogenase 8 OS=Homo sapiens GN=RDH8 PE=1 SV=1 | 122 | 242 | 2.0E-13 |
| sp|Q9N126|RDH8_BOVIN | Retinol dehydrogenase 8 OS=Bos taurus GN=RDH8 PE=1 SV=1 | 122 | 242 | 3.0E-13 |
| sp|P37959|YUSZ_BACSU | Uncharacterized oxidoreductase YusZ OS=Bacillus subtilis (strain 168) GN=yusZ PE=3 SV=2 | 72 | 230 | 8.0E-12 |
| sp|Q7Q732|DHRS7_ANOGA | Dehydrogenase/reductase SDR family protein 7-like OS=Anopheles gambiae GN=AGAP005532 PE=3 SV=3 | 107 | 230 | 2.0E-11 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9P324|YI78_SCHPO | Uncharacterized oxidoreductase C977.08/C1348.09 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC977.08 PE=3 SV=1 | 107 | 230 | 1.0E-13 |
| sp|Q9NYR8|RDH8_HUMAN | Retinol dehydrogenase 8 OS=Homo sapiens GN=RDH8 PE=1 SV=1 | 122 | 242 | 2.0E-13 |
| sp|Q9N126|RDH8_BOVIN | Retinol dehydrogenase 8 OS=Bos taurus GN=RDH8 PE=1 SV=1 | 122 | 242 | 3.0E-13 |
| sp|P37959|YUSZ_BACSU | Uncharacterized oxidoreductase YusZ OS=Bacillus subtilis (strain 168) GN=yusZ PE=3 SV=2 | 72 | 230 | 8.0E-12 |
| sp|Q7Q732|DHRS7_ANOGA | Dehydrogenase/reductase SDR family protein 7-like OS=Anopheles gambiae GN=AGAP005532 PE=3 SV=3 | 107 | 230 | 2.0E-11 |
| sp|P14061|DHB1_HUMAN | Estradiol 17-beta-dehydrogenase 1 OS=Homo sapiens GN=HSD17B1 PE=1 SV=3 | 101 | 246 | 3.0E-11 |
| sp|Q1WNP0|DHB1_PANTR | Estradiol 17-beta-dehydrogenase 1 OS=Pan troglodytes GN=HSD17B1 PE=3 SV=3 | 101 | 246 | 4.0E-11 |
| sp|Q99J47|DRS7B_MOUSE | Dehydrogenase/reductase SDR family member 7B OS=Mus musculus GN=Dhrs7b PE=1 SV=1 | 112 | 231 | 5.0E-11 |
| sp|Q9ZKW1|VDLC_HELPJ | Probable short-chain type dehydrogenase/reductase VdlC OS=Helicobacter pylori (strain J99 / ATCC 700824) GN=vdlC PE=3 SV=1 | 125 | 230 | 1.0E-10 |
| sp|O05730|VDLC_HELPY | Probable short-chain type dehydrogenase/reductase VdlC OS=Helicobacter pylori (strain ATCC 700392 / 26695) GN=vdlC PE=3 SV=2 | 125 | 230 | 1.0E-10 |
| sp|P51656|DHB1_MOUSE | Estradiol 17-beta-dehydrogenase 1 OS=Mus musculus GN=Hsd17b1 PE=2 SV=1 | 113 | 245 | 2.0E-10 |
| sp|Q937L4|CPNA_COMTE | Cyclopentanol dehydrogenase OS=Comamonas testosteroni GN=cpnA PE=3 SV=1 | 122 | 246 | 2.0E-10 |
| sp|Q8GAV9|CPNA_COMS9 | Cyclopentanol dehydrogenase OS=Comamonas sp. (strain NCIMB 9872) GN=cpnA PE=1 SV=1 | 122 | 246 | 2.0E-10 |
| sp|Q5R6U1|DRS7B_PONAB | Dehydrogenase/reductase SDR family member 7B OS=Pongo abelii GN=DHRS7B PE=2 SV=2 | 112 | 231 | 4.0E-10 |
| sp|P51657|DHB1_RAT | Estradiol 17-beta-dehydrogenase 1 OS=Rattus norvegicus GN=Hsd17b1 PE=1 SV=1 | 113 | 229 | 8.0E-10 |
| sp|Q6IAN0|DRS7B_HUMAN | Dehydrogenase/reductase SDR family member 7B OS=Homo sapiens GN=DHRS7B PE=1 SV=2 | 112 | 231 | 8.0E-10 |
| sp|A9UM79|DRS7C_XENTR | Dehydrogenase/reductase SDR family member 7C OS=Xenopus tropicalis GN=dhrs7c PE=2 SV=1 | 121 | 230 | 1.0E-09 |
| sp|Q5RJY4|DRS7B_RAT | Dehydrogenase/reductase SDR family member 7B OS=Rattus norvegicus GN=Dhrs7b PE=1 SV=1 | 113 | 230 | 2.0E-09 |
| sp|Q0IH28|DRS7B_XENLA | Dehydrogenase/reductase SDR family member 7B OS=Xenopus laevis GN=dhrs7b PE=2 SV=1 | 113 | 230 | 2.0E-09 |
| sp|O74628|YQ53_SCHPO | Uncharacterized oxidoreductase C162.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC162.03 PE=3 SV=1 | 107 | 252 | 4.0E-09 |
| sp|Q0VFE7|DRS7B_XENTR | Dehydrogenase/reductase SDR family member 7B OS=Xenopus tropicalis GN=dhrs7b PE=2 SV=1 | 109 | 230 | 4.0E-09 |
| sp|Q06136|KDSR_HUMAN | 3-ketodihydrosphingosine reductase OS=Homo sapiens GN=KDSR PE=1 SV=1 | 114 | 230 | 7.0E-09 |
| sp|Q3T0R4|DRS7B_BOVIN | Dehydrogenase/reductase SDR family member 7B OS=Bos taurus GN=DHRS7B PE=2 SV=1 | 113 | 231 | 1.0E-08 |
| sp|Q56840|HCDR_XANP2 | 2-(R)-hydroxypropyl-CoM dehydrogenase OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=xecD PE=1 SV=3 | 33 | 231 | 1.0E-08 |
| sp|A6NNS2|DRS7C_HUMAN | Dehydrogenase/reductase SDR family member 7C OS=Homo sapiens GN=DHRS7C PE=2 SV=3 | 109 | 230 | 3.0E-08 |
| sp|A8E5C5|DS7CA_DANRE | Dehydrogenase/reductase SDR family member 7C-A OS=Danio rerio GN=dhrs7ca PE=2 SV=1 | 107 | 228 | 4.0E-08 |
| sp|Q6GV12|KDSR_MOUSE | 3-ketodihydrosphingosine reductase OS=Mus musculus GN=Kdsr PE=1 SV=1 | 114 | 230 | 4.0E-08 |
| sp|Q1RMJ5|DRS7C_BOVIN | Dehydrogenase/reductase SDR family member 7C OS=Bos taurus GN=DHRS7C PE=2 SV=2 | 109 | 230 | 4.0E-08 |
| sp|Q566S6|DRS7B_DANRE | Dehydrogenase/reductase SDR family member 7B OS=Danio rerio GN=dhrs7b PE=2 SV=1 | 110 | 239 | 1.0E-07 |
| sp|P54554|YQJQ_BACSU | Uncharacterized oxidoreductase YqjQ OS=Bacillus subtilis (strain 168) GN=yqjQ PE=3 SV=1 | 60 | 230 | 1.0E-07 |
| sp|Q8CHS7|DRS7C_MOUSE | Dehydrogenase/reductase SDR family member 7C OS=Mus musculus GN=Dhrs7c PE=1 SV=3 | 109 | 230 | 1.0E-07 |
| sp|Q2KIJ5|KDSR_BOVIN | 3-ketodihydrosphingosine reductase OS=Bos taurus GN=KDSR PE=2 SV=1 | 114 | 230 | 2.0E-07 |
| sp|P28845|DHI1_HUMAN | Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Homo sapiens GN=HSD11B1 PE=1 SV=3 | 114 | 227 | 4.0E-07 |
| sp|P0AFP4|YBBO_ECOLI | Uncharacterized oxidoreductase YbbO OS=Escherichia coli (strain K12) GN=ybbO PE=3 SV=1 | 132 | 231 | 4.0E-07 |
| sp|P0AFP5|YBBO_ECOL6 | Uncharacterized oxidoreductase YbbO OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=ybbO PE=3 SV=1 | 132 | 231 | 4.0E-07 |
| sp|Q9Y140|DHRS7_DROME | Dehydrogenase/reductase SDR family protein 7-like OS=Drosophila melanogaster GN=CG7601 PE=2 SV=1 | 114 | 230 | 5.0E-07 |
| sp|Q49WS9|Y1627_STAS1 | Uncharacterized oxidoreductase SSP1627 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP1627 PE=3 SV=1 | 110 | 257 | 7.0E-07 |
| sp|Q556J2|KDSR_DICDI | 3-ketodihydrosphingosine reductase OS=Dictyostelium discoideum GN=ksrA-1 PE=3 SV=1 | 122 | 230 | 1.0E-06 |
| sp|Q7M3I4|DHI1_RABIT | Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Oryctolagus cuniculus GN=HSD11B1 PE=1 SV=2 | 73 | 227 | 1.0E-06 |
| sp|Q5BL28|DS7CB_DANRE | Dehydrogenase/reductase SDR family member 7C-B OS=Danio rerio GN=dhrs7cb PE=2 SV=1 | 107 | 229 | 1.0E-06 |
| sp|Q9MA93|GRDH2_ARATH | Glucose and ribitol dehydrogenase homolog 2 OS=Arabidopsis thaliana GN=At3g05260 PE=2 SV=1 | 105 | 230 | 2.0E-06 |
| sp|Q29608|DHI1_SAISC | Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Saimiri sciureus GN=HSD11B1 PE=2 SV=3 | 114 | 227 | 2.0E-06 |
| sp|Q8T197|DHRS7_DICDI | Dehydrogenase/reductase SDR family protein 7-like OS=Dictyostelium discoideum GN=DDB_G0274201 PE=3 SV=1 | 107 | 230 | 2.0E-06 |
| sp|P9WGP9|SADH_MYCTU | Putative oxidoreductase SadH OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=sadH PE=2 SV=1 | 128 | 230 | 2.0E-06 |
| sp|P9WGP8|SADH_MYCTO | Putative oxidoreductase SadH OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=sadH PE=3 SV=1 | 128 | 230 | 2.0E-06 |
| sp|Q9BTZ2|DHRS4_HUMAN | Dehydrogenase/reductase SDR family member 4 OS=Homo sapiens GN=DHRS4 PE=1 SV=3 | 114 | 243 | 5.0E-06 |
| sp|Q8WNV7|DHRS4_PIG | Dehydrogenase/reductase SDR family member 4 OS=Sus scrofa GN=DHRS4 PE=1 SV=2 | 36 | 230 | 5.0E-06 |
| sp|Q5RCF8|DHRS4_PONAB | Dehydrogenase/reductase SDR family member 4 OS=Pongo abelii GN=DHRS4 PE=2 SV=3 | 114 | 243 | 5.0E-06 |
| Gene cluster ID | Type of secondary metabolism gene |
|---|---|
| Cluster 37 | Decorating |
| Orthofinder run ID | 4 |
| Orthogroup | 1942 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|8027 MSAGTAVSPSTATHPSTRQSLPPLVFPTHNSPRTWLLTAALSPLAVRLIRRLLSHGDYVVACLPPHEIEHDERSA EFRELIAECKSSRKDREGWKDRIRGIRCDGRMSSCGAAVAEAVQLFGAIDILLCCRSEAVVGTVEELSTTPVTQN LVREQFEAIFFTQVNFIKAALPVLRSQHTGHIIILTSIGGHIGTPGMSMYTAATWALEGFCDSLAYEVAPFNIKL TIVQPNKEIQSLTNRLIFAPQIPTYADIFNNAPSIRDMLINVLNTDSNTAVPQFPLPDPDATPSTPESTSLEPEK GYGEIFSRYPKLPPGAADKLVNETVHALTAIGGHENPPSRHIVGTEGAIAVKEKLKTVTEEMEDFVDASLAVDIS DSALREEARSSRKGDTTSPAAGISSGLG* |
| Coding | >OphauB2|8027 ATGAGTGCAGGCACGGCAGTTTCGCCTTCCACGGCGACGCACCCGTCGACACGGCAGTCGTTGCCGCCTCTGGTA TTCCCGACGCACAATTCGCCTCGAACATGGCTCCTCACGGCCGCCCTCTCGCCGCTGGCAGTGCGCCTCATTCGC CGTCTGCTATCGCATGGAGACTACGTCGTCGCCTGCTTGCCACCACACGAGATTGAGCACGACGAGCGCAGTGCC GAGTTTCGCGAGCTGATTGCCGAATGCAAGAGCTCGCGCAAGGATCGCGAGGGCTGGAAGGACCGTATCCGCGGC ATTCGCTGCGATGGCCGCATGAGCTCATGCGGCGCCGCCGTGGCCGAGGCTGTCCAGCTCTTTGGAGCCATTGAC ATTTTGCTGTGCTGCAGATCAGAAGCCGTGGTGGGGACCGTCGAGGAGCTCTCGACTACTCCTGTGACACAGAAC CTAGTACGCGAGCAGTTCGAGGCCATCTTCTTTACCCAAGTCAACTTCATCAAGGCCGCGCTTCCCGTTCTTCGC TCCCAGCACACGGGCCACATCATCATCCTCACCAGCATCGGCGGCCACATCGGCACCCCCGGCATGTCCATGTAC ACGGCTGCCACGTGGGCTCTCGAGGGCTTTTGCGACTCTCTGGCTTACGAAGTTGCTCCCTTCAACATCAAACTC ACCATTGTCCAGCCCAATAAAGAAATACAGTCCCTCACCAACCGCCTCATCTTTGCGCCCCAGATACCCACCTAT GCCGACATCTTTAATAACGCGCCCAGCATTCGTGATATGCTCATAAACGTCTTGAACACGGATTCTAACACGGCT GTACCTCAATTTCCTCTTCCTGACCCCGACGCCACGCCATCGACCCCTGAAAGCACCTCGCTCGAGCCTGAAAAG GGCTACGGCGAGATCTTTTCCCGCTACCCGAAGCTTCCCCCAGGAGCGGCCGATAAACTGGTAAATGAGACGGTT CACGCGCTCACGGCAATTGGTGGACACGAGAATCCTCCCTCGCGGCACATTGTCGGAACCGAAGGCGCCATTGCC GTCAAGGAAAAGCTCAAGACGGTCACTGAAGAGATGGAGGATTTTGTTGATGCCAGCTTGGCAGTCGACATCTCT GACAGCGCGCTTAGAGAAGAGGCGAGGAGTAGCAGAAAAGGAGACACCACGTCTCCAGCAGCTGGGATTTCGTCG GGTCTTGGGTAG |
| Transcript | >OphauB2|8027 ATGAGTGCAGGCACGGCAGTTTCGCCTTCCACGGCGACGCACCCGTCGACACGGCAGTCGTTGCCGCCTCTGGTA TTCCCGACGCACAATTCGCCTCGAACATGGCTCCTCACGGCCGCCCTCTCGCCGCTGGCAGTGCGCCTCATTCGC CGTCTGCTATCGCATGGAGACTACGTCGTCGCCTGCTTGCCACCACACGAGATTGAGCACGACGAGCGCAGTGCC GAGTTTCGCGAGCTGATTGCCGAATGCAAGAGCTCGCGCAAGGATCGCGAGGGCTGGAAGGACCGTATCCGCGGC ATTCGCTGCGATGGCCGCATGAGCTCATGCGGCGCCGCCGTGGCCGAGGCTGTCCAGCTCTTTGGAGCCATTGAC ATTTTGCTGTGCTGCAGATCAGAAGCCGTGGTGGGGACCGTCGAGGAGCTCTCGACTACTCCTGTGACACAGAAC CTAGTACGCGAGCAGTTCGAGGCCATCTTCTTTACCCAAGTCAACTTCATCAAGGCCGCGCTTCCCGTTCTTCGC TCCCAGCACACGGGCCACATCATCATCCTCACCAGCATCGGCGGCCACATCGGCACCCCCGGCATGTCCATGTAC ACGGCTGCCACGTGGGCTCTCGAGGGCTTTTGCGACTCTCTGGCTTACGAAGTTGCTCCCTTCAACATCAAACTC ACCATTGTCCAGCCCAATAAAGAAATACAGTCCCTCACCAACCGCCTCATCTTTGCGCCCCAGATACCCACCTAT GCCGACATCTTTAATAACGCGCCCAGCATTCGTGATATGCTCATAAACGTCTTGAACACGGATTCTAACACGGCT GTACCTCAATTTCCTCTTCCTGACCCCGACGCCACGCCATCGACCCCTGAAAGCACCTCGCTCGAGCCTGAAAAG GGCTACGGCGAGATCTTTTCCCGCTACCCGAAGCTTCCCCCAGGAGCGGCCGATAAACTGGTAAATGAGACGGTT CACGCGCTCACGGCAATTGGTGGACACGAGAATCCTCCCTCGCGGCACATTGTCGGAACCGAAGGCGCCATTGCC GTCAAGGAAAAGCTCAAGACGGTCACTGAAGAGATGGAGGATTTTGTTGATGCCAGCTTGGCAGTCGACATCTCT GACAGCGCGCTTAGAGAAGAGGCGAGGAGTAGCAGAAAAGGAGACACCACGTCTCCAGCAGCTGGGATTTCGTCG GGTCTTGGGTAG |
| Gene | >OphauB2|8027 ATGAGGTGAGCAGCTCTTGTCATGGACACGCAATAGCGGAAAAAGCGCGAAACGACGTGAATGATGAACAAGACA AGAAACGACAACGCCCCTCGAGCTCTAACAATTGCTACTAATTGCTAATGATTGCTTGCATGCGGCGGCAAGTGC AGGCACGGCAGTTTCGCCTTCCACGGCGACGCACCCGTCGACACGGCAGTCGTTGCCGCCTCTGGTATTCCGTAT GTTTCTCCCATTGCCCTGTTGCGCCTGGCCTGCTGCATTGCCCAAAACACAACCAGTCTTGTCCTGTTTAATGCC TGTTTTTTGTCCTTGATCATGTCGATACGAAATTGGCCTTTTTGGTGTCTACTTCTACTTGGGCAGTAGCTCCAG CGTCATTGGCCAGATCCTAAGGGATTGCTACATGGCGAGAAAAAAAAATGACGACTTGTGTCGCCCCTTTGAAAC CTTGTTTCGCCCGGTCGCTACGCCAACTCTCGGCCGTTCCTCTTTTTGTCAGACCCTCTCTGCATCCGCCTTGCT ACTCTTGCCCTTGCTAGAGATCCGTGGACAGCATGCCTAGGATGGCGATGGGCGCCGATTCATGACCCTCTGCGC CAAACACTAGACGTCGTCATGGCAGATGCTGACAGTGCCTCTCAACCAAATGATAAAGCGACGCACAATTCGCCT CGAACATGGCTCCTCACGGCCGCCCTCTCGCCGCTGGCAGTGCGCCTCATTCGCCGTCTGCTATCGCATGGAGAC TACGTCGTCGCCTGCTTGCCACCACACGAGATTGAGCACGACGAGCGCAGTGCCGAGTTTCGCGAGCTGATTGCC GAATGCAAGAGCTCGCGCAAGGATCGCGAGGGCTGGAAGGACCGTATCCGCGGCATTCGCTGCGATGGCCGCATG AGCTCATGCGGCGCCGCCGTGGCCGAGGCTGTCCAGCTCTTTGGAGCCATTGACATTTTGCTGTGCTGCAGATCA GAAGGTGGGCTTAGACACATGTTGGCGCTCGAGTTGCGCTCCAAGCTGATGGTGAAGCGACACAGCCGTGGTGGG GACCGTCGAGGAGCTCTCGACTACTCCTGTGACACAGAACCTAGTACGCGAGCAGTTCGAGGCCATCTTCTTTAC CCAAGTCAACTTCATCAAGGCCGCGCTTCCCGTTCTTCGCTCCCAGCACACGGGCCACATCATCATCCTCACCAG CATCGGCGGCCACATCGGCACCCCCGGCATGTCCATGTACACGGCTGCCACGTGGGCTCTCGAGGGCTTTTGCGA CTCTCTGGCTTACGAAGTTGCTCCCTTCAACATCAAACTCACCATTGTCCAGCCCAATAAAGAAATACAGTCCCT CACCAACCGCCTCATCTTTGCGCCCCAGATACCCACCTATGCCGACATCTTTAATAACGCGCCCAGCATTCGTGA TATGCTCATAAACGTCTTGAACACGGATTCTAACACGGCTGTACCTCAATTTCCTCTTCCTGACCCCGACGCCAC GCCATCGACCCCTGAAAGCACCTCGCTCGAGCCTGAAAAGGGCTACGGCGAGATCTTTTCCCGCTACCCGAAGCT TCCCCCAGGAGCGGCCGATAAACTGGTAAATGAGACGGTTCACGCGCTCACGGCAATTGGTGGACACGAGAATCC TCCCTCGCGGCACATTGTCGGAACCGAAGGCGCCATTGCCGTCAAGGAAAAGCTCAAGACGGTCACTGAAGAGAT GGAGGATTTTGTTGATGCCAGCTTGGCAGTCGACATCTCTGACAGCGCGCTTAGAGAAGAGGCGAGGAGTAGCAG AAAAGGAGACACCACGTCTCCAGCAGCTGGGATTTCGTCGGGTCTTGGGTAG |