© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|7983 |
| Gene name | |
| Location | Contig_92:50977..52827 |
| Strand | + |
| Gene length (bp) | 1850 |
| Transcript length (bp) | 1788 |
| Coding sequence length (bp) | 1788 |
| Protein length (aa) | 596 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07662 | Nucleos_tra2_C | Na+ dependent nucleoside transporter C-terminus | 1.8E-69 | 366 | 578 |
| PF01773 | Nucleos_tra2_N | Na+ dependent nucleoside transporter N-terminus | 3.5E-22 | 181 | 251 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9UA35|S28A3_EPTST | Solute carrier family 28 member 3 OS=Eptatretus stoutii GN=SLC28A3 PE=2 SV=1 | 8 | 585 | 5.0E-83 |
| sp|Q9ERH8|S28A3_MOUSE | Solute carrier family 28 member 3 OS=Mus musculus GN=Slc28a3 PE=2 SV=1 | 178 | 583 | 9.0E-76 |
| sp|Q8VIH3|S28A3_RAT | Solute carrier family 28 member 3 OS=Rattus norvegicus GN=Slc28a3 PE=2 SV=1 | 175 | 586 | 1.0E-75 |
| sp|Q62773|S28A2_RAT | Sodium/nucleoside cotransporter 2 OS=Rattus norvegicus GN=Slc28a2 PE=1 SV=1 | 173 | 580 | 2.0E-75 |
| sp|Q9HAS3|S28A3_HUMAN | Solute carrier family 28 member 3 OS=Homo sapiens GN=SLC28A3 PE=1 SV=1 | 2 | 583 | 2.0E-74 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9UA35|S28A3_EPTST | Solute carrier family 28 member 3 OS=Eptatretus stoutii GN=SLC28A3 PE=2 SV=1 | 8 | 585 | 5.0E-83 |
| sp|Q9ERH8|S28A3_MOUSE | Solute carrier family 28 member 3 OS=Mus musculus GN=Slc28a3 PE=2 SV=1 | 178 | 583 | 9.0E-76 |
| sp|Q8VIH3|S28A3_RAT | Solute carrier family 28 member 3 OS=Rattus norvegicus GN=Slc28a3 PE=2 SV=1 | 175 | 586 | 1.0E-75 |
| sp|Q62773|S28A2_RAT | Sodium/nucleoside cotransporter 2 OS=Rattus norvegicus GN=Slc28a2 PE=1 SV=1 | 173 | 580 | 2.0E-75 |
| sp|Q9HAS3|S28A3_HUMAN | Solute carrier family 28 member 3 OS=Homo sapiens GN=SLC28A3 PE=1 SV=1 | 2 | 583 | 2.0E-74 |
| sp|Q62674|S28A1_RAT | Sodium/nucleoside cotransporter 1 OS=Rattus norvegicus GN=Slc28a1 PE=1 SV=1 | 173 | 580 | 8.0E-74 |
| sp|O62667|S28A1_PIG | Sodium/nucleoside cotransporter 1 OS=Sus scrofa GN=SLC28A1 PE=2 SV=1 | 173 | 580 | 1.0E-73 |
| sp|O43868|S28A2_HUMAN | Sodium/nucleoside cotransporter 2 OS=Homo sapiens GN=SLC28A2 PE=2 SV=2 | 173 | 580 | 1.0E-73 |
| sp|O88627|S28A2_MOUSE | Sodium/nucleoside cotransporter 2 OS=Mus musculus GN=Slc28a2 PE=1 SV=2 | 173 | 580 | 2.0E-73 |
| sp|Q9MZT2|S28A1_RABIT | Sodium/nucleoside cotransporter 1 OS=Oryctolagus cuniculus GN=SLC28A1 PE=2 SV=1 | 173 | 580 | 1.0E-72 |
| sp|O00337|S28A1_HUMAN | Sodium/nucleoside cotransporter 1 OS=Homo sapiens GN=SLC28A1 PE=1 SV=2 | 152 | 580 | 5.0E-71 |
| sp|O32115|YUTK_BACSU | Uncharacterized transporter YutK OS=Bacillus subtilis (strain 168) GN=yutK PE=3 SV=1 | 180 | 581 | 2.0E-69 |
| sp|P44742|Y519_HAEIN | Uncharacterized transporter HI_0519 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_0519 PE=3 SV=1 | 179 | 581 | 2.0E-64 |
| sp|O25792|NUPC_HELPY | Nucleoside permease NupC OS=Helicobacter pylori (strain ATCC 700392 / 26695) GN=nupC PE=3 SV=1 | 179 | 581 | 9.0E-52 |
| sp|P33021|NUPX_ECOLI | Putative nucleoside permease NupX OS=Escherichia coli (strain K12) GN=nupX PE=1 SV=1 | 179 | 581 | 3.0E-47 |
| sp|P33024|PSUT_ECOLI | Putative pseudouridine transporter OS=Escherichia coli (strain K12) GN=psuT PE=1 SV=1 | 179 | 581 | 4.0E-42 |
| sp|P0AFF2|NUPC_ECOLI | Nucleoside permease NupC OS=Escherichia coli (strain K12) GN=nupC PE=1 SV=1 | 192 | 581 | 3.0E-28 |
| sp|P0AFF3|NUPC_ECOL6 | Nucleoside permease NupC OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=nupC PE=3 SV=1 | 192 | 581 | 3.0E-28 |
| sp|P42312|NUPG_BACSU | Purine nucleoside transport protein NupG OS=Bacillus subtilis (strain 168) GN=nupG PE=1 SV=2 | 178 | 581 | 7.0E-26 |
| sp|P39141|NUPC_BACSU | Nucleoside permease NupC OS=Bacillus subtilis (strain 168) GN=nupC PE=2 SV=4 | 191 | 580 | 2.0E-24 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 42 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 71 | 88 | 17 |
| 2 | 98 | 115 | 17 |
| 3 | 147 | 164 | 17 |
| 4 | 174 | 193 | 19 |
| 5 | 200 | 222 | 22 |
| 6 | 260 | 282 | 22 |
| 7 | 295 | 317 | 22 |
| 8 | 337 | 359 | 22 |
| 9 | 428 | 450 | 22 |
| 10 | 460 | 479 | 19 |
| 11 | 522 | 544 | 22 |
| 12 | 559 | 581 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|7983 MAGNDGAPEAAAAPLQHQDDEGAPKDQGSSKSPPDYDAEKTEAGVVRTEQGSTETTSRYARLGPIYRHRRSLMHL FLFLFFTGWWIASLVLHRRDKNWIVPLLLWLAISLRLFFWHVSSRYLSNAIRWLWRHSALVIYHAVPARLRTLAG AGLAVSAILVGSFVSPESADNTRANRAVSLFGMAFIIFAFYLTSAARRHINWRTVIVGMLAQYIIGLFVLRTKVG YDIFRFIADRAGDLLGFARDGVAFLTTPEVSQLPWFFFGVIPSIIFFISLVQVLFHIGFLQWFIRKFAHFVFWAL GVSGAEAVVAAATPFIGQGESAMLVRPFVPHMTKAEIHQILTCGFATISGSVLVGYIGLGLNPEALVSSCIMSIP ASLAISKLRYPETEETLTAGRVVLPQDAEQDAENALHAFSNGAWFGIRVGATIIASLLCVLGAVGLINGLLTWWG RYININNPQLTLQTILSYILYPVAFLLGVPRNGDLLKVAKLIAEKVVTNEYKAFSMLAHDPEYANLSARSQLIAT YALCGFGNIGSLGVQIGILTQLAPSRGGDVSRLALSALISGVMSTLTSATVAGLVVTTQLSRFVATGQAS* |
| Coding | >OphauB2|7983 ATGGCTGGTAATGACGGCGCCCCAGAAGCAGCAGCAGCACCGTTGCAACACCAAGACGACGAGGGCGCGCCCAAG GACCAGGGCTCAAGCAAAAGCCCGCCCGACTACGATGCTGAAAAAACAGAGGCTGGCGTGGTGCGCACCGAGCAG GGCTCGACCGAGACAACATCGCGATATGCCCGTCTCGGTCCCATCTATCGCCACCGGCGCTCCCTGATGCACCTC TTCCTCTTCCTCTTCTTCACTGGCTGGTGGATCGCGTCGCTGGTGCTGCACCGGCGCGACAAGAACTGGATCGTT CCCCTGCTGCTATGGCTGGCCATTTCGCTGCGGCTCTTCTTTTGGCATGTGTCGAGCCGCTACCTGTCCAACGCC ATACGCTGGCTGTGGCGCCACTCGGCCCTCGTCATCTACCATGCCGTGCCAGCCCGGTTGCGCACGCTGGCCGGC GCAGGCTTGGCCGTATCTGCCATCCTCGTCGGCTCCTTTGTGTCGCCCGAGAGCGCCGACAACACGCGCGCCAAC CGCGCCGTCAGCCTCTTTGGCATGGCCTTCATCATCTTTGCCTTTTACCTGACGAGCGCCGCCCGCCGCCACATC AACTGGCGCACCGTCATTGTCGGCATGCTGGCCCAGTACATCATTGGCCTCTTTGTCCTGCGCACAAAGGTGGGC TACGACATTTTCCGCTTCATTGCCGACCGCGCTGGCGATTTGCTGGGCTTTGCCCGCGACGGCGTCGCCTTTCTC ACCACCCCCGAGGTGTCCCAGCTGCCCTGGTTCTTCTTTGGCGTCATTCCCTCCATCATCTTCTTCATCTCCCTC GTCCAAGTCCTCTTCCACATTGGATTCCTCCAGTGGTTCATCCGCAAGTTTGCCCACTTTGTCTTTTGGGCTCTG GGCGTCTCGGGTGCCGAGGCCGTTGTCGCTGCCGCTACGCCCTTTATCGGCCAGGGCGAGTCGGCCATGCTGGTC CGCCCCTTTGTCCCTCACATGACCAAGGCCGAGATCCATCAGATCCTGACATGTGGCTTTGCCACCATTTCCGGC TCCGTTCTTGTCGGCTACATTGGTCTTGGGCTCAACCCCGAGGCCCTCGTCTCGTCGTGCATCATGTCCATTCCT GCCTCGCTCGCCATTTCCAAGCTACGCTACCCCGAGACGGAGGAGACGCTGACTGCTGGCCGTGTGGTGCTCCCC CAAGATGCCGAGCAGGATGCCGAGAATGCCCTCCACGCCTTTTCCAATGGTGCCTGGTTCGGCATCCGAGTCGGC GCCACCATTATTGCCTCGCTGCTCTGCGTCCTTGGCGCTGTCGGTCTCATCAATGGTCTGCTCACTTGGTGGGGG CGTTACATCAACATCAATAATCCGCAGTTGACCCTGCAGACAATCTTGTCATACATTCTGTATCCCGTGGCCTTT TTGCTTGGCGTCCCGCGAAACGGCGACTTGCTCAAGGTGGCCAAGCTGATTGCTGAAAAGGTTGTAACGAACGAG TACAAGGCCTTTTCCATGCTGGCCCATGACCCTGAATATGCCAACCTCTCGGCACGCTCTCAGCTCATTGCCACA TATGCTCTCTGTGGCTTTGGTAACATTGGCTCCCTGGGTGTACAAATCGGCATTCTCACACAGCTGGCGCCCTCG CGAGGCGGAGATGTGTCACGTCTTGCCCTGTCGGCTCTGATTTCTGGCGTCATGTCGACGCTGACGTCGGCCACG GTTGCCGGCCTCGTTGTCACCACCCAACTGTCACGCTTTGTCGCCACCGGACAAGCTTCATAG |
| Transcript | >OphauB2|7983 ATGGCTGGTAATGACGGCGCCCCAGAAGCAGCAGCAGCACCGTTGCAACACCAAGACGACGAGGGCGCGCCCAAG GACCAGGGCTCAAGCAAAAGCCCGCCCGACTACGATGCTGAAAAAACAGAGGCTGGCGTGGTGCGCACCGAGCAG GGCTCGACCGAGACAACATCGCGATATGCCCGTCTCGGTCCCATCTATCGCCACCGGCGCTCCCTGATGCACCTC TTCCTCTTCCTCTTCTTCACTGGCTGGTGGATCGCGTCGCTGGTGCTGCACCGGCGCGACAAGAACTGGATCGTT CCCCTGCTGCTATGGCTGGCCATTTCGCTGCGGCTCTTCTTTTGGCATGTGTCGAGCCGCTACCTGTCCAACGCC ATACGCTGGCTGTGGCGCCACTCGGCCCTCGTCATCTACCATGCCGTGCCAGCCCGGTTGCGCACGCTGGCCGGC GCAGGCTTGGCCGTATCTGCCATCCTCGTCGGCTCCTTTGTGTCGCCCGAGAGCGCCGACAACACGCGCGCCAAC CGCGCCGTCAGCCTCTTTGGCATGGCCTTCATCATCTTTGCCTTTTACCTGACGAGCGCCGCCCGCCGCCACATC AACTGGCGCACCGTCATTGTCGGCATGCTGGCCCAGTACATCATTGGCCTCTTTGTCCTGCGCACAAAGGTGGGC TACGACATTTTCCGCTTCATTGCCGACCGCGCTGGCGATTTGCTGGGCTTTGCCCGCGACGGCGTCGCCTTTCTC ACCACCCCCGAGGTGTCCCAGCTGCCCTGGTTCTTCTTTGGCGTCATTCCCTCCATCATCTTCTTCATCTCCCTC GTCCAAGTCCTCTTCCACATTGGATTCCTCCAGTGGTTCATCCGCAAGTTTGCCCACTTTGTCTTTTGGGCTCTG GGCGTCTCGGGTGCCGAGGCCGTTGTCGCTGCCGCTACGCCCTTTATCGGCCAGGGCGAGTCGGCCATGCTGGTC CGCCCCTTTGTCCCTCACATGACCAAGGCCGAGATCCATCAGATCCTGACATGTGGCTTTGCCACCATTTCCGGC TCCGTTCTTGTCGGCTACATTGGTCTTGGGCTCAACCCCGAGGCCCTCGTCTCGTCGTGCATCATGTCCATTCCT GCCTCGCTCGCCATTTCCAAGCTACGCTACCCCGAGACGGAGGAGACGCTGACTGCTGGCCGTGTGGTGCTCCCC CAAGATGCCGAGCAGGATGCCGAGAATGCCCTCCACGCCTTTTCCAATGGTGCCTGGTTCGGCATCCGAGTCGGC GCCACCATTATTGCCTCGCTGCTCTGCGTCCTTGGCGCTGTCGGTCTCATCAATGGTCTGCTCACTTGGTGGGGG CGTTACATCAACATCAATAATCCGCAGTTGACCCTGCAGACAATCTTGTCATACATTCTGTATCCCGTGGCCTTT TTGCTTGGCGTCCCGCGAAACGGCGACTTGCTCAAGGTGGCCAAGCTGATTGCTGAAAAGGTTGTAACGAACGAG TACAAGGCCTTTTCCATGCTGGCCCATGACCCTGAATATGCCAACCTCTCGGCACGCTCTCAGCTCATTGCCACA TATGCTCTCTGTGGCTTTGGTAACATTGGCTCCCTGGGTGTACAAATCGGCATTCTCACACAGCTGGCGCCCTCG CGAGGCGGAGATGTGTCACGTCTTGCCCTGTCGGCTCTGATTTCTGGCGTCATGTCGACGCTGACGTCGGCCACG GTTGCCGGCCTCGTTGTCACCACCCAACTGTCACGCTTTGTCGCCACCGGACAAGCTTCATAG |
| Gene | >OphauB2|7983 ATGGCTGGTAATGACGGCGCCCCAGAAGCAGCAGCAGCACCGTTGCAACACCAAGACGACGAGGGCGCGCCCAAG GACCAGGGCTCAAGCAAAAGCCCGCCCGACTACGATGCTGAAAAAACAGAGGCTGGCGTGGTGCGCACCGAGCAG GGCTCGACCGAGACAACATCGCGATATGCCCGTCTCGGTCCCATCTATCGCCACCGGCGCTCCCTGATGCACCTC TTCCTCTTCCTCTTCTTCACTGGCTGGTGGATCGCGTCGCTGGTGCTGCACCGGCGCGACAAGAACTGGATCGTT CCCCTGCTGCTATGGCTGGCCATTTCGCTGCGGCTCTTCTTTTGGCATGTGTCGAGCCGCTACCTGTCCAACGCC ATACGCTGGCTGTGGCGCCACTCGGCCCTCGTCATCTACCATGCCGTGCCAGCCCGGTTGCGCACGCTGGCCGGC GCAGGCTTGGCCGTATCTGCCATCCTCGTCGGCTCCTTTGTGTCGCCCGAGAGCGCCGACAACACGCGCGCCAAC CGCGCCGTCAGCCTCTTTGGCATGGCCTTCATCATCTTTGCCTTTTACCTGACGAGCGCCGCCCGCCGCCACATC AACTGGCGCACCGTCATTGTCGGCATGCTGGCCCAGTACATCATTGGCCTCTTTGTCCTGCGCACAAAGGTGGGC TACGACATTTTCCGCTTCATTGCCGACCGCGCTGGCGATTTGCTGGGCTTTGCCCGCGACGGCGTCGCCTTTCTC ACCACCCCCGAGGTGTCCCAGCTGCCCTGGTTCTTCTTTGGCGTCATTCCCTCCATCATCTTCTTCATCTCCCTC GTCCAAGTCCTCTTCCACATTGGATTCCTCCAGTGGTTCATCCGCAAGTTTGCCCACTTTGTCTTTTGGGCTCTG GGCGTCTCGGGTGCCGAGGCCGTTGTCGCTGCCGCTACGCCCTTTATCGGCCAGGGCGAGTCGGCCATGCTGGTC CGCCCCTTTGTCCCTCACATGACCAAGGCCGAGATCCATCAGATCCTGACATGTGGCTTTGCCACCATTTCCGGC TCCGTTCTTGTCGGCTACATTGGTCTTGGGCTCAACCCCGAGGCCCTCGTCTCGTCGTGCATCATGTCCATTCCT GCCTCGCTCGCCATTTCCAAGCTACGCTACCCCGAGACGGAGGAGACGCTGACTGCTGGCCGTGTGGTGCTCCCC CAAGATGCCGAGCAGGATGCCGAGAATGCCCTCCACGCCTTTTCCAATGGTGCCTGGTTCGGCATCCGAGTCGGC GCCACCATTATTGCCTCGCTGCTCTGCGTCCTTGGCGCTGTCGGTCTCATCAATGGTCTGCTCACTTGGTGGGGG CGTTACATCAACATCAATAATCCGCAGTTGACCCTGCAGACAATCTTGTCATACATTCTGTATCCCGTGGCCTTT TTGCTTGGCGTCCCGCGAAACGGCGACTTGCTCAAGGTGGCCAAGCTGATTGCTGAAAAGGTTGTAACGGTAAGT CGCAATATCTGCTCCTAGTCCCTACCTTACCTTATTAACAGTCCATGATCGGTAAGAACGAGTACAAGGCCTTTT CCATGCTGGCCCATGACCCTGAATATGCCAACCTCTCGGCACGCTCTCAGCTCATTGCCACATATGCTCTCTGTG GCTTTGGTAACATTGGCTCCCTGGGTGTACAAATCGGCATTCTCACACAGCTGGCGCCCTCGCGAGGCGGAGATG TGTCACGTCTTGCCCTGTCGGCTCTGATTTCTGGCGTCATGTCGACGCTGACGTCGGCCACGGTTGCCGGCCTCG TTGTCACCACCCAACTGTCACGCTTTGTCGCCACCGGACAAGCTTCATAG |