© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|7949 |
| Gene name | |
| Location | Contig_91:10909..12356 |
| Strand | - |
| Gene length (bp) | 1447 |
| Transcript length (bp) | 1362 |
| Coding sequence length (bp) | 1362 |
| Protein length (aa) | 454 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF16491 | Peptidase_M48_N | CAAX prenyl protease N-terminal, five membrane helices | 7.7E-63 | 41 | 222 |
| PF01435 | Peptidase_M48 | Peptidase family M48 | 4.0E-48 | 225 | 429 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P47154|STE24_YEAST | CAAX prenyl protease 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=STE24 PE=1 SV=1 | 8 | 430 | 1.0E-123 |
| sp|Q10071|STE24_SCHPO | Probable CAAX prenyl protease 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC3H1.05 PE=3 SV=1 | 2 | 430 | 1.0E-114 |
| sp|Q8RX88|FACE1_ARATH | CAAX prenyl protease 1 homolog OS=Arabidopsis thaliana GN=FACE1 PE=1 SV=1 | 18 | 433 | 1.0E-113 |
| sp|Q6EPN8|FACE1_ORYSJ | CAAX prenyl protease 1 homolog OS=Oryza sativa subsp. japonica GN=FACE1 PE=2 SV=1 | 18 | 441 | 4.0E-108 |
| sp|Q80W54|FACE1_MOUSE | CAAX prenyl protease 1 homolog OS=Mus musculus GN=Zmpste24 PE=1 SV=2 | 17 | 434 | 2.0E-102 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P47154|STE24_YEAST | CAAX prenyl protease 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=STE24 PE=1 SV=1 | 8 | 430 | 1.0E-123 |
| sp|Q10071|STE24_SCHPO | Probable CAAX prenyl protease 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC3H1.05 PE=3 SV=1 | 2 | 430 | 1.0E-114 |
| sp|Q8RX88|FACE1_ARATH | CAAX prenyl protease 1 homolog OS=Arabidopsis thaliana GN=FACE1 PE=1 SV=1 | 18 | 433 | 1.0E-113 |
| sp|Q6EPN8|FACE1_ORYSJ | CAAX prenyl protease 1 homolog OS=Oryza sativa subsp. japonica GN=FACE1 PE=2 SV=1 | 18 | 441 | 4.0E-108 |
| sp|Q80W54|FACE1_MOUSE | CAAX prenyl protease 1 homolog OS=Mus musculus GN=Zmpste24 PE=1 SV=2 | 17 | 434 | 2.0E-102 |
| sp|O75844|FACE1_HUMAN | CAAX prenyl protease 1 homolog OS=Homo sapiens GN=ZMPSTE24 PE=1 SV=2 | 18 | 428 | 4.0E-99 |
| sp|Q54FH7|FACE1_DICDI | CAAX prenyl protease 1 homolog OS=Dictyostelium discoideum GN=zmpste24 PE=3 SV=1 | 27 | 431 | 2.0E-88 |
| sp|Q9XVE5|FACE1_CAEEL | CAAX prenyl protease 1 homolog OS=Caenorhabditis elegans GN=fce-1 PE=1 SV=1 | 21 | 428 | 7.0E-68 |
| sp|P40769|YHFN_BACSU | Uncharacterized metalloprotease YhfN OS=Bacillus subtilis (strain 168) GN=yhfN PE=3 SV=2 | 185 | 442 | 8.0E-19 |
| sp|B3QED3|HTPX_RHOPT | Protease HtpX homolog OS=Rhodopseudomonas palustris (strain TIE-1) GN=htpX PE=3 SV=1 | 235 | 451 | 1.0E-09 |
| sp|Q3SW84|HTPX_NITWN | Protease HtpX homolog OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=htpX PE=3 SV=1 | 235 | 428 | 2.0E-09 |
| sp|B0VDQ0|HTPX_ACIBY | Protease HtpX OS=Acinetobacter baumannii (strain AYE) GN=htpX PE=3 SV=1 | 235 | 428 | 5.0E-08 |
| sp|A3M830|HTPX_ACIBT | Protease HtpX OS=Acinetobacter baumannii (strain ATCC 17978 / CIP 53.77 / LMG 1025 / NCDC KC755 / 5377) GN=htpX PE=3 SV=2 | 235 | 428 | 5.0E-08 |
| sp|B0VT08|HTPX_ACIBS | Protease HtpX OS=Acinetobacter baumannii (strain SDF) GN=htpX PE=3 SV=1 | 235 | 428 | 5.0E-08 |
| sp|B2HXB0|HTPX_ACIBC | Protease HtpX OS=Acinetobacter baumannii (strain ACICU) GN=htpX PE=3 SV=1 | 235 | 428 | 5.0E-08 |
| sp|B7I612|HTPX_ACIB5 | Protease HtpX OS=Acinetobacter baumannii (strain AB0057) GN=htpX PE=3 SV=1 | 235 | 428 | 5.0E-08 |
| sp|B7GY42|HTPX_ACIB3 | Protease HtpX OS=Acinetobacter baumannii (strain AB307-0294) GN=htpX PE=3 SV=1 | 235 | 428 | 5.0E-08 |
| sp|Q6F8Q1|HTPX_ACIAD | Protease HtpX OS=Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1) GN=htpX PE=3 SV=1 | 235 | 428 | 1.0E-07 |
| sp|Q5ZZ31|HTPX_LEGPH | Protease HtpX OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=htpX PE=3 SV=1 | 235 | 401 | 9.0E-07 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0006508 | proteolysis | Yes |
| GO:0004222 | metalloendopeptidase activity | Yes |
| GO:0008233 | peptidase activity | No |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0004175 | endopeptidase activity | No |
| GO:0140096 | catalytic activity, acting on a protein | No |
| GO:0019538 | protein metabolic process | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0008152 | metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0016787 | hydrolase activity | No |
| GO:0008237 | metallopeptidase activity | No |
| GO:0003674 | molecular_function | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0003824 | catalytic activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 107 | 129 | 22 |
| 2 | 160 | 182 | 22 |
| 3 | 194 | 216 | 22 |
| 4 | 304 | 326 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|7949 MMDFLQRLASLLDRPLFPWKKLILGFSIGQYVLESLLTLRQYRVLQRTKPPAVLAQEISTETFDKSQAYGRAKAR FEIVSGLWSQLQNIYFVQADVLPRMWAWTGALAAHWGFGGEVGHSIVFVLGFVVLQQVLGLPTRIYGTFVLEERF GFNKQTPKLFVTDIIKTNVLTAVFVPPVLAAVIKIIRLTGNQFVFYLWVFAAGLQVFLTTAYPIFIQPLFNKLSP LEQGPLKTRVEQLASRFKFPLHELFVIDGSKRSAHSNAYFYGLPWKKHIVLYDTLLDKMDTDEIMAVLAHELGHW KLGHTTFLFGITQAHLLYIFSLFSLFMNNNSLYSAFGFHNQHPIIIGFILFSDALSPMDTVIKLLLNILSRRYEF QADTFAKELGYRAQLASSLIKLHAQNLSTMDADWVYATYHYSHPHLSERLKALDWKPKDAASEKSTDGVVKASGR DEL* |
| Coding | >OphauB2|7949 ATGATGGATTTTCTTCAACGCCTAGCGAGCCTCCTCGACCGCCCCCTCTTCCCGTGGAAGAAGCTCATTCTCGGC TTCTCTATTGGCCAATATGTTCTCGAATCGCTCCTCACCCTGCGCCAGTACCGCGTGCTGCAGCGCACCAAGCCG CCCGCCGTGCTGGCGCAAGAAATCTCGACTGAAACATTTGACAAGTCGCAAGCCTATGGCCGCGCCAAGGCTCGC TTTGAGATTGTGAGCGGGCTGTGGTCGCAGCTGCAAAACATTTACTTTGTGCAGGCGGATGTGCTGCCGCGCATG TGGGCGTGGACGGGCGCGTTGGCGGCGCACTGGGGCTTTGGCGGCGAAGTCGGGCATTCCATTGTCTTTGTTTTG GGATTTGTCGTCTTGCAGCAGGTGCTGGGCCTGCCGACGCGCATCTATGGCACCTTTGTGCTTGAGGAGCGCTTT GGATTCAATAAGCAGACGCCCAAGCTGTTTGTCACGGACATTATCAAGACAAATGTCTTGACGGCCGTCTTTGTG CCGCCAGTCTTGGCCGCCGTCATCAAGATTATTCGTCTGACGGGCAACCAGTTTGTCTTTTACCTCTGGGTCTTT GCCGCCGGCCTGCAAGTCTTTCTCACAACGGCCTATCCCATTTTTATCCAGCCTCTTTTCAACAAGCTCTCGCCG CTTGAGCAAGGCCCGCTAAAGACGCGAGTCGAGCAACTGGCCTCGCGCTTCAAGTTTCCCCTGCACGAGCTCTTT GTCATTGACGGCAGCAAGCGCAGCGCCCACTCAAACGCCTACTTTTACGGCTTGCCGTGGAAGAAGCACATTGTC TTGTACGACACGCTTCTTGATAAAATGGACACGGACGAAATCATGGCTGTGCTTGCCCACGAGCTCGGCCACTGG AAACTCGGCCACACCACGTTCCTCTTTGGCATCACCCAGGCCCACCTCCTCTACATTTTTAGCCTCTTTTCTCTC TTCATGAACAACAACTCGCTCTACTCCGCCTTTGGCTTCCACAACCAACACCCCATCATTATTGGCTTCATCCTC TTTTCCGACGCCCTCTCCCCCATGGACACCGTCATCAAGCTGCTCCTAAACATCTTGTCGCGCCGCTACGAATTC CAAGCCGACACGTTTGCAAAGGAGCTTGGCTACCGCGCCCAGCTTGCCTCGTCCCTCATCAAGCTGCACGCCCAG AACCTGAGCACCATGGACGCAGACTGGGTCTATGCCACTTATCACTACTCCCACCCCCATCTCTCGGAACGTCTC AAGGCGCTCGATTGGAAGCCAAAGGACGCGGCAAGTGAAAAGTCGACCGATGGAGTCGTCAAGGCCAGTGGCAGG GACGAGTTATAG |
| Transcript | >OphauB2|7949 ATGATGGATTTTCTTCAACGCCTAGCGAGCCTCCTCGACCGCCCCCTCTTCCCGTGGAAGAAGCTCATTCTCGGC TTCTCTATTGGCCAATATGTTCTCGAATCGCTCCTCACCCTGCGCCAGTACCGCGTGCTGCAGCGCACCAAGCCG CCCGCCGTGCTGGCGCAAGAAATCTCGACTGAAACATTTGACAAGTCGCAAGCCTATGGCCGCGCCAAGGCTCGC TTTGAGATTGTGAGCGGGCTGTGGTCGCAGCTGCAAAACATTTACTTTGTGCAGGCGGATGTGCTGCCGCGCATG TGGGCGTGGACGGGCGCGTTGGCGGCGCACTGGGGCTTTGGCGGCGAAGTCGGGCATTCCATTGTCTTTGTTTTG GGATTTGTCGTCTTGCAGCAGGTGCTGGGCCTGCCGACGCGCATCTATGGCACCTTTGTGCTTGAGGAGCGCTTT GGATTCAATAAGCAGACGCCCAAGCTGTTTGTCACGGACATTATCAAGACAAATGTCTTGACGGCCGTCTTTGTG CCGCCAGTCTTGGCCGCCGTCATCAAGATTATTCGTCTGACGGGCAACCAGTTTGTCTTTTACCTCTGGGTCTTT GCCGCCGGCCTGCAAGTCTTTCTCACAACGGCCTATCCCATTTTTATCCAGCCTCTTTTCAACAAGCTCTCGCCG CTTGAGCAAGGCCCGCTAAAGACGCGAGTCGAGCAACTGGCCTCGCGCTTCAAGTTTCCCCTGCACGAGCTCTTT GTCATTGACGGCAGCAAGCGCAGCGCCCACTCAAACGCCTACTTTTACGGCTTGCCGTGGAAGAAGCACATTGTC TTGTACGACACGCTTCTTGATAAAATGGACACGGACGAAATCATGGCTGTGCTTGCCCACGAGCTCGGCCACTGG AAACTCGGCCACACCACGTTCCTCTTTGGCATCACCCAGGCCCACCTCCTCTACATTTTTAGCCTCTTTTCTCTC TTCATGAACAACAACTCGCTCTACTCCGCCTTTGGCTTCCACAACCAACACCCCATCATTATTGGCTTCATCCTC TTTTCCGACGCCCTCTCCCCCATGGACACCGTCATCAAGCTGCTCCTAAACATCTTGTCGCGCCGCTACGAATTC CAAGCCGACACGTTTGCAAAGGAGCTTGGCTACCGCGCCCAGCTTGCCTCGTCCCTCATCAAGCTGCACGCCCAG AACCTGAGCACCATGGACGCAGACTGGGTCTATGCCACTTATCACTACTCCCACCCCCATCTCTCGGAACGTCTC AAGGCGCTCGATTGGAAGCCAAAGGACGCGGCAAGTGAAAAGTCGACCGATGGAGTCGTCAAGGCCAGTGGCAGG GACGAGTTATAG |
| Gene | >OphauB2|7949 ATGATGGATTTTCTTCAAGTATGCATCTCCCCAATGCCTCTGCCCGCCATGCACCGCACGTAAAAGCCGACACTA ACCCGTTCTCTTCTCTCTCCGTCCCCAGCGCCTAGCGAGCCTCCTCGACCGCCCCCTCTTCCCGTGGAAGAAGCT CATTCTCGGCTTCTCTATTGGCCAATATGTTCTCGAATCGCTCCTCACCCTGCGCCAGTACCGCGTGCTGCAGCG CACCAAGCCGCCCGCCGTGCTGGCGCAAGAAATCTCGACTGAAACATTTGACAAGTCGCAAGCCTATGGCCGCGC CAAGGCTCGCTTTGAGATTGTGAGCGGGCTGTGGTCGCAGCTGCAAAACATTTACTTTGTGCAGGCGGATGTGCT GCCGCGCATGTGGGCGTGGACGGGCGCGTTGGCGGCGCACTGGGGCTTTGGCGGCGAAGTCGGGCATTCCATTGT CTTTGTTTTGGGATTTGTCGTCTTGCAGCAGGTGCTGGGCCTGCCGACGCGCATCTATGGCACCTTTGTGCTTGA GGAGCGCTTTGGATTCAATAAGCAGACGCCCAAGCTGTTTGTCACGGACATTATCAAGACAAATGTCTTGACGGC CGTCTTTGTGCCGCCAGTCTTGGCCGCCGTCATCAAGATTATTCGTCTGACGGGCAACCAGTTTGTCTTTTACCT CTGGGTCTTTGCCGCCGGCCTGCAAGTCTTTCTCACAACGGCCTATCCCATTTTTATCCAGCCTCTTTTCAACAA GCTCTCGCCGCTTGAGCAAGGCCCGCTAAAGACGCGAGTCGAGCAACTGGCCTCGCGCTTCAAGTTTCCCCTGCA CGAGCTCTTTGTCATTGACGGCAGCAAGCGCAGCGCCCACTCAAACGCCTACTTTTACGGCTTGCCGTGGAAGAA GCACATTGTCTTGTACGACACGCTTCTTGATAAAATGGACACGGACGAAATCATGGCTGTGCTTGCCCACGAGCT CGGCCACTGGAAACTCGGCCACACCACGTTCCTCTTTGGCATCACCCAGGCCCACCTCCTCTACATTTTTAGCCT CTTTTCTCTCTTCATGAACAACAACTCGCTCTACTCCGCCTTTGGCTTCCACAACCAACACCCCATCATTATTGG CTTCATCCTCTTTTCCGACGCCCTCTCCCCCATGGACACCGTCATCAAGCTGCTCCTAAACATCTTGTCGCGCCG CTACGAATTCCAAGCCGACACGTTTGCAAAGGAGCTTGGCTACCGCGCCCAGCTTGCCTCGTCCCTCATCAAGCT GCACGCCCAGAACCTGAGCACCATGGACGCAGACTGGGTCTATGCCACTTATCACTACTCCCACCCCCATCTCTC GGAACGTCTCAAGGCGCTCGATTGGAAGCCAAAGGACGCGGCAAGTGAAAAGTCGACCGATGGAGTCGTCAAGGC CAGTGGCAGGGACGAGTTATAG |