Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|792
Gene name
LocationContig_117:24824..25824
Strand-
Gene length (bp)1000
Transcript length (bp)903
Coding sequence length (bp)903
Protein length (aa) 301

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03798 TRAM_LAG1_CLN8 TLC domain 4.3E-40 33 269

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P78970|LAG1_SCHPO Sphingosine N-acyltransferase lag1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=lag1 PE=1 SV=2 1 292 3.0E-44
sp|P38703|LAG1_YEAST Sphingosine N-acyltransferase LAG1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=LAG1 PE=1 SV=1 1 300 1.0E-28
sp|A6ZSP9|LAG1_YEAS7 Sphingosine N-acyltransferase LAG1 OS=Saccharomyces cerevisiae (strain YJM789) GN=LAG1 PE=3 SV=1 1 300 2.0E-28
sp|P28496|LAC1_YEAST Sphingosine N-acyltransferase LAC1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=LAC1 PE=1 SV=2 1 192 2.0E-23
sp|A6ZZV7|LAC1_YEAS7 Sphingosine N-acyltransferase LAC1 OS=Saccharomyces cerevisiae (strain YJM789) GN=LAC1 PE=3 SV=1 1 192 2.0E-23
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Swissprot ID Swissprot Description Start End E-value
sp|P78970|LAG1_SCHPO Sphingosine N-acyltransferase lag1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=lag1 PE=1 SV=2 1 292 3.0E-44
sp|P38703|LAG1_YEAST Sphingosine N-acyltransferase LAG1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=LAG1 PE=1 SV=1 1 300 1.0E-28
sp|A6ZSP9|LAG1_YEAS7 Sphingosine N-acyltransferase LAG1 OS=Saccharomyces cerevisiae (strain YJM789) GN=LAG1 PE=3 SV=1 1 300 2.0E-28
sp|P28496|LAC1_YEAST Sphingosine N-acyltransferase LAC1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=LAC1 PE=1 SV=2 1 192 2.0E-23
sp|A6ZZV7|LAC1_YEAS7 Sphingosine N-acyltransferase LAC1 OS=Saccharomyces cerevisiae (strain YJM789) GN=LAC1 PE=3 SV=1 1 192 2.0E-23
sp|O59735|LAC1_SCHPO Sphingosine N-acyltransferase lac1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=lac1 PE=1 SV=2 19 278 6.0E-22
sp|G5ED45|HYL1_CAEEL Ceramide synthase hyl-1 OS=Caenorhabditis elegans GN=hyl-1 PE=1 SV=1 24 300 8.0E-21
sp|Q9D6J1|CERS4_MOUSE Ceramide synthase 4 OS=Mus musculus GN=Cers4 PE=1 SV=1 21 297 2.0E-19
sp|Q7Z139|HYL2_CAEEL Ceramide synthase hyl-2 OS=Caenorhabditis elegans GN=hyl-2 PE=1 SV=1 18 216 1.0E-18
sp|Q5E9R6|CERS4_BOVIN Ceramide synthase 4 OS=Bos taurus GN=CERS4 PE=2 SV=1 21 300 3.0E-18
sp|Q96G23|CERS2_HUMAN Ceramide synthase 2 OS=Homo sapiens GN=CERS2 PE=1 SV=1 21 286 2.0E-17
sp|Q3ZBF8|CERS2_BOVIN Ceramide synthase 2 OS=Bos taurus GN=CERS2 PE=2 SV=1 21 286 5.0E-17
sp|Q84QC0|ASCL3_ORYSJ ASC1-like protein 3 OS=Oryza sativa subsp. japonica GN=Os03g0264000 PE=2 SV=1 1 292 7.0E-17
sp|Q6EUN0|ASCL1_ORYSJ ASC1-like protein 1 OS=Oryza sativa subsp. japonica GN=Os02g0581300 PE=2 SV=1 29 294 1.0E-16
sp|Q8N5B7|CERS5_HUMAN Ceramide synthase 5 OS=Homo sapiens GN=CERS5 PE=2 SV=1 27 181 3.0E-16
sp|Q9LJK3|LAG12_ARATH LAG1 longevity assurance homolog 2 OS=Arabidopsis thaliana GN=LAG2 PE=1 SV=1 75 292 4.0E-16
sp|Q924Z4|CERS2_MOUSE Ceramide synthase 2 OS=Mus musculus GN=Cers2 PE=1 SV=1 21 286 9.0E-16
sp|Q6YWS8|ASCL2_ORYSJ ASC1-like protein 2 OS=Oryza sativa subsp. japonica GN=Os02g0728300 PE=3 SV=2 2 285 2.0E-15
sp|Q9LDF2|LAG11_ARATH LAG1 longevity assurance homolog 1 OS=Arabidopsis thaliana GN=LAG1 PE=2 SV=1 2 294 1.0E-14
sp|Q8C172|CERS6_MOUSE Ceramide synthase 6 OS=Mus musculus GN=Cers6 PE=1 SV=1 21 181 1.0E-14
sp|Q6NQI8|LAG13_ARATH LAG1 longevity assurance homolog 3 OS=Arabidopsis thaliana GN=At1g13580 PE=2 SV=2 2 294 2.0E-14
sp|Q9M6A3|ASC1_SOLLC Protein ASC1 OS=Solanum lycopersicum GN=Asc-1 PE=2 SV=2 13 294 2.0E-14
sp|Q6ZMG9|CERS6_HUMAN Ceramide synthase 6 OS=Homo sapiens GN=CERS6 PE=1 SV=1 21 181 2.0E-14
sp|Q9D6K9|CERS5_MOUSE Ceramide synthase 5 OS=Mus musculus GN=Cers5 PE=1 SV=1 27 284 1.0E-13
sp|Q9HA82|CERS4_HUMAN Ceramide synthase 4 OS=Homo sapiens GN=CERS4 PE=1 SV=2 21 300 9.0E-13
sp|Q8W4Y5|ASCL_SOLLC ASC1-like protein OS=Solanum lycopersicum PE=2 SV=1 2 294 2.0E-12
sp|Q1A3B0|CERS3_MOUSE Ceramide synthase 3 OS=Mus musculus GN=Cers3 PE=1 SV=1 19 287 3.0E-10
sp|P27545|CERS1_MOUSE Ceramide synthase 1 OS=Mus musculus GN=Cers1 PE=1 SV=1 5 163 5.0E-10
sp|P27544|CERS1_HUMAN Ceramide synthase 1 OS=Homo sapiens GN=CERS1 PE=1 SV=1 5 163 1.0E-08
sp|Q8IU89|CERS3_HUMAN Ceramide synthase 3 OS=Homo sapiens GN=CERS3 PE=1 SV=2 22 285 5.0E-06
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GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0031224 intrinsic component of membrane No
GO:0110165 cellular anatomical entity No
GO:0005575 cellular_component No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 13 0.5

Transmembrane Domains

Domain # Start End Length
1 39 61 22
2 120 142 22
3 163 185 22
4 245 267 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|792
MVFIVGFRSAATQYAYEPLARRLGIVKAKDVPRFTEQAWLMTYSCTSLPIGLVDIPYIYLTSSYAFSMPHLWMDW
PWRGLDGLTKRYMLAQLAFWLAQILVMHIEERRKDYPQMLAHHVITIALVGGAYVYHLYPVGNLILVLMDISDFF
LPLAKCLRYSGKRALCDVVFCFFLVSWILTRHVMFLRVCWSLWADPPRVMRGQCFRGGIDSGLQGPFEAPRDGSW
GYMLEPFFNARGTICFSPEIQGVFLAGLLGLQVLIVMWLVMILRIAKRVIAGSMAEDLRSDDGSGDEGQGEAEVE
*
Coding >OphauB2|792
ATGGTATTCATCGTGGGGTTCCGGTCAGCAGCGACTCAATATGCCTATGAGCCTCTGGCTCGACGGTTGGGAATC
GTCAAGGCCAAGGACGTGCCTCGTTTTACCGAGCAAGCTTGGTTGATGACGTACAGCTGCACCTCGTTGCCAATA
GGATTGGTAGATATCCCCTACATCTACTTGACCTCGTCCTACGCATTTAGTATGCCTCACTTGTGGATGGATTGG
CCCTGGCGCGGACTCGATGGACTCACCAAGAGATACATGCTGGCGCAGCTTGCCTTTTGGTTGGCGCAGATTTTG
GTGATGCACATTGAAGAACGCCGTAAAGACTATCCGCAGATGCTGGCGCACCACGTTATCACGATTGCCCTCGTT
GGCGGTGCCTATGTCTATCACCTTTATCCGGTGGGAAATTTGATTCTAGTCCTCATGGACATATCCGATTTCTTT
TTGCCATTGGCCAAATGTCTGCGTTATTCGGGCAAGCGAGCTCTCTGCGATGTCGTCTTCTGCTTCTTTCTGGTA
TCTTGGATCCTTACACGGCACGTCATGTTCCTCCGTGTGTGCTGGAGCCTTTGGGCCGATCCGCCACGCGTCATG
CGCGGCCAGTGCTTCCGAGGTGGCATCGATAGCGGGCTCCAAGGGCCCTTTGAAGCGCCACGTGATGGCAGCTGG
GGCTATATGTTGGAGCCATTTTTCAATGCTCGAGGAACCATCTGTTTCAGCCCGGAGATTCAGGGGGTTTTTTTG
GCTGGTTTGTTGGGGCTGCAGGTGCTGATAGTCATGTGGCTCGTCATGATACTACGCATCGCCAAGCGTGTCATT
GCCGGTAGCATGGCTGAGGACTTGCGCAGCGATGACGGAAGCGGGGACGAGGGTCAAGGTGAAGCCGAGGTGGAG
TGA
Transcript >OphauB2|792
ATGGTATTCATCGTGGGGTTCCGGTCAGCAGCGACTCAATATGCCTATGAGCCTCTGGCTCGACGGTTGGGAATC
GTCAAGGCCAAGGACGTGCCTCGTTTTACCGAGCAAGCTTGGTTGATGACGTACAGCTGCACCTCGTTGCCAATA
GGATTGGTAGATATCCCCTACATCTACTTGACCTCGTCCTACGCATTTAGTATGCCTCACTTGTGGATGGATTGG
CCCTGGCGCGGACTCGATGGACTCACCAAGAGATACATGCTGGCGCAGCTTGCCTTTTGGTTGGCGCAGATTTTG
GTGATGCACATTGAAGAACGCCGTAAAGACTATCCGCAGATGCTGGCGCACCACGTTATCACGATTGCCCTCGTT
GGCGGTGCCTATGTCTATCACCTTTATCCGGTGGGAAATTTGATTCTAGTCCTCATGGACATATCCGATTTCTTT
TTGCCATTGGCCAAATGTCTGCGTTATTCGGGCAAGCGAGCTCTCTGCGATGTCGTCTTCTGCTTCTTTCTGGTA
TCTTGGATCCTTACACGGCACGTCATGTTCCTCCGTGTGTGCTGGAGCCTTTGGGCCGATCCGCCACGCGTCATG
CGCGGCCAGTGCTTCCGAGGTGGCATCGATAGCGGGCTCCAAGGGCCCTTTGAAGCGCCACGTGATGGCAGCTGG
GGCTATATGTTGGAGCCATTTTTCAATGCTCGAGGAACCATCTGTTTCAGCCCGGAGATTCAGGGGGTTTTTTTG
GCTGGTTTGTTGGGGCTGCAGGTGCTGATAGTCATGTGGCTCGTCATGATACTACGCATCGCCAAGCGTGTCATT
GCCGGTAGCATGGCTGAGGACTTGCGCAGCGATGACGGAAGCGGGGACGAGGGTCAAGGTGAAGCCGAGGTGGAG
TGA
Gene >OphauB2|792
ATGGTATTCATCGTGGGGTTCCGGTCAGCAGCGACTCAATATGCCTATGAGCCTCTGGCTCGACGGTTGGGAATC
GTCAAGGCCAAGGACGTGCCTCGTTTTACCGAGCAAGCTTGGTTGATGACGTACAGCTGCACCTCGTTGCCAATA
GGATTGGTAGATATCCCCGTAGCCTCACGGCGCTGGACTTGTCTCTGGGCTAATGGATATTTCAGTACATCTACT
TGACCTCGTCCTACGCATTTAGTATGCCTCACTTGTGGATGGATTGGCCCTGGCGCGGACTCGATGGACTCACCA
AGAGATACATGCTGGCGCAGCTTGCCTTTTGGTTGGCGCAGATTTTGGTGATGCACATTGAAGAACGCCGTAAAG
ACTATCCGCAGATGCTGGCGCACCACGTTATCACGATTGCCCTCGTTGGCGGTGCCTATGTCTATCACCTTTATC
CGGTGGGAAATTTGATTCTAGTCCTCATGGACATATCCGATTTCTTTTTGCCAGTAAGTGTCAATGTCGCCGTTT
GCAGGAAATGGGGGCTGACTCGGCAAAGTTGGCCAAATGTCTGCGTTATTCGGGCAAGCGAGCTCTCTGCGATGT
CGTCTTCTGCTTCTTTCTGGTATCTTGGATCCTTACACGGCACGTCATGTTCCTCCGTGTGTGCTGGAGCCTTTG
GGCCGATCCGCCACGCGTCATGCGCGGCCAGTGCTTCCGAGGTGGCATCGATAGCGGGCTCCAAGGGCCCTTTGA
AGCGCCACGTGATGGCAGCTGGGGCTATATGTTGGAGCCATTTTTCAATGCTCGAGGAACCATCTGTTTCAGCCC
GGAGATTCAGGGGGTTTTTTTGGCTGGTTTGTTGGGGCTGCAGGTGCTGATAGTCATGTGGCTCGTCATGATACT
ACGCATCGCCAAGCGTGTCATTGCCGGTAGCATGGCTGAGGACTTGCGCAGCGATGACGGAAGCGGGGACGAGGG
TCAAGGTGAAGCCGAGGTGGAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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