Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauB2\|7905
Gene name
Location	Contig_9:263084..264100
Strand	+
Gene length (bp)	1016
Transcript length (bp)	930
Coding sequence length (bp)	930
Protein length (aa)	310

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF02330	MAM33	Mitochondrial glycoprotein	7.9E-69	72	307

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|O94675\|MAM33_SCHPO	Mitochondrial acidic protein mam33 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC776.07 PE=3 SV=1	101	307	8.0E-22
sp\|P40513\|MAM33_YEAST	Mitochondrial acidic protein MAM33 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MAM33 PE=1 SV=1	2	307	6.0E-20
sp\|Q8W487\|YB95_ARATH	Uncharacterized protein At2g39795, mitochondrial OS=Arabidopsis thaliana GN=At2g39795 PE=2 SV=1	19	308	4.0E-09

GO

GO Term	Description	Terminal node
GO:0005759	mitochondrial matrix	Yes
GO:0110165	cellular anatomical entity	No
GO:0031974	membrane-enclosed lumen	No
GO:0070013	intracellular organelle lumen	No
GO:0005575	cellular_component	No
GO:0043233	organelle lumen	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 17	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauB2\|7905 MLALRALVRSTPRALARTSAPSLRQSLARPSALSTALLAMRNASRPGHAAFSTTVFRAASSGETDEDLSSKLDSE IQIEEELKNSEQQPASVKDFLENSPFELVDKPGQETVKLIRKFGDEEITVSFSIADVSDYESMSDDHALADEDLG EGGMQDANRQDHVPAAGGPRSAPAQEQMDEDEDENMDEEPSPTPINLTIVVEKPGKTTGALTIDAMAADGNVSVE NVFFYEDAKVARIDTPESAQKRARSYPGPPFGSLDEDLQVLVERYLEERGINQAMSIFVTDFVDVKEQKEYMRWL SNVKKFIDA*
Coding	>OphauB2\|7905 ATGCTCGCCCTCCGAGCTCTTGTGCGCTCGACTCCGCGGGCTCTTGCTCGCACGAGTGCACCATCTCTCCGCCAG TCACTTGCACGTCCCAGCGCACTTAGCACAGCTCTGTTGGCCATGAGGAATGCCTCAAGGCCCGGCCATGCTGCC TTTTCAACAACAGTTTTTAGGGCAGCATCAAGTGGTGAAACTGATGAGGACCTCTCGTCCAAGCTTGACAGCGAG ATTCAGATTGAGGAGGAGCTCAAGAACAGCGAGCAGCAGCCGGCTAGCGTCAAGGACTTTTTGGAGAATTCTCCC TTTGAGCTAGTTGACAAGCCTGGGCAAGAGACTGTCAAGCTGATTCGCAAATTTGGCGATGAAGAAATCACCGTC AGCTTCTCCATTGCAGATGTTTCTGATTACGAGTCCATGTCCGATGATCATGCCCTCGCTGATGAGGATCTCGGT GAAGGCGGCATGCAAGACGCCAACCGCCAAGATCACGTCCCCGCTGCAGGTGGACCCCGCTCTGCTCCCGCCCAG GAGCAGATGGATGAGGATGAGGATGAGAACATGGACGAGGAACCTTCTCCAACGCCCATCAATCTGACCATTGTG GTCGAGAAGCCCGGTAAGACTACTGGTGCCCTCACCATCGATGCCATGGCAGCGGACGGCAATGTCTCGGTAGAA AACGTCTTTTTCTACGAAGACGCCAAGGTCGCAAGGATCGATACCCCAGAGTCGGCTCAAAAGCGTGCCCGCTCT TACCCTGGCCCGCCCTTTGGCAGTCTTGATGAGGACCTTCAAGTTCTCGTCGAGCGTTACCTTGAGGAGCGCGGC ATCAACCAGGCCATGTCCATCTTTGTCACCGATTTCGTCGACGTCAAGGAACAGAAAGAGTACATGCGCTGGCTC AGCAATGTCAAGAAGTTTATTGACGCTTAA
Transcript	>OphauB2\|7905 ATGCTCGCCCTCCGAGCTCTTGTGCGCTCGACTCCGCGGGCTCTTGCTCGCACGAGTGCACCATCTCTCCGCCAG TCACTTGCACGTCCCAGCGCACTTAGCACAGCTCTGTTGGCCATGAGGAATGCCTCAAGGCCCGGCCATGCTGCC TTTTCAACAACAGTTTTTAGGGCAGCATCAAGTGGTGAAACTGATGAGGACCTCTCGTCCAAGCTTGACAGCGAG ATTCAGATTGAGGAGGAGCTCAAGAACAGCGAGCAGCAGCCGGCTAGCGTCAAGGACTTTTTGGAGAATTCTCCC TTTGAGCTAGTTGACAAGCCTGGGCAAGAGACTGTCAAGCTGATTCGCAAATTTGGCGATGAAGAAATCACCGTC AGCTTCTCCATTGCAGATGTTTCTGATTACGAGTCCATGTCCGATGATCATGCCCTCGCTGATGAGGATCTCGGT GAAGGCGGCATGCAAGACGCCAACCGCCAAGATCACGTCCCCGCTGCAGGTGGACCCCGCTCTGCTCCCGCCCAG GAGCAGATGGATGAGGATGAGGATGAGAACATGGACGAGGAACCTTCTCCAACGCCCATCAATCTGACCATTGTG GTCGAGAAGCCCGGTAAGACTACTGGTGCCCTCACCATCGATGCCATGGCAGCGGACGGCAATGTCTCGGTAGAA AACGTCTTTTTCTACGAAGACGCCAAGGTCGCAAGGATCGATACCCCAGAGTCGGCTCAAAAGCGTGCCCGCTCT TACCCTGGCCCGCCCTTTGGCAGTCTTGATGAGGACCTTCAAGTTCTCGTCGAGCGTTACCTTGAGGAGCGCGGC ATCAACCAGGCCATGTCCATCTTTGTCACCGATTTCGTCGACGTCAAGGAACAGAAAGAGTACATGCGCTGGCTC AGCAATGTCAAGAAGTTTATTGACGCTTAA
Gene	>OphauB2\|7905 ATGCTCGCCCTCCGAGCTCTTGTGCGCTCGACTCCGCGGGCTCTTGCTCGCACGAGTGCACCATCTCTCCGCCAG TCACTTGCACGTCCCAGCGCACTTAGCACAGCTCTGTTGGCCATGAGGAATGCCTCAAGGCCCGGCCATGCTGCC TTTTCAACAACAGTTTTTAGGGCAGCATCAAGTGGTGAAACTGATGAGGACCTCTCGTCCAAGCTTGACAGCGAG ATTCAGATTGAGGAGGAGCTCAAGAACAGCGAGCAGCAGCCGGCTAGCGTCAAGGACTTTTTGGAGAATTCTCCC TTTGAGCTAGTTGACAAGCCTGGGCAAGAGACTGTCAAGCTGATTCGCAAATTTGGCGATGAAGAGTACGTCTTT TTTTCCCCTTTATTCTTGTTGCAAAGAGAAACAAGTCACATGTGGGTATTTGAAAACTAACCCAGTATTCGTCCA GAATCACCGTCAGCTTCTCCATTGCAGATGTTTCTGATTACGAGTCCATGTCCGATGATCATGCCCTCGCTGATG AGGATCTCGGTGAAGGCGGCATGCAAGACGCCAACCGCCAAGATCACGTCCCCGCTGCAGGTGGACCCCGCTCTG CTCCCGCCCAGGAGCAGATGGATGAGGATGAGGATGAGAACATGGACGAGGAACCTTCTCCAACGCCCATCAATC TGACCATTGTGGTCGAGAAGCCCGGTAAGACTACTGGTGCCCTCACCATCGATGCCATGGCAGCGGACGGCAATG TCTCGGTAGAAAACGTCTTTTTCTACGAAGACGCCAAGGTCGCAAGGATCGATACCCCAGAGTCGGCTCAAAAGC GTGCCCGCTCTTACCCTGGCCCGCCCTTTGGCAGTCTTGATGAGGACCTTCAAGTTCTCGTCGAGCGTTACCTTG AGGAGCGCGGCATCAACCAGGCCATGTCCATCTTTGTCACCGATTTCGTCGACGTCAAGGAACAGAAAGAGTACA TGCGCTGGCTCAGCAATGTCAAGAAGTTTATTGACGCTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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