© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|7869 |
| Gene name | |
| Location | Contig_9:167967..168813 |
| Strand | - |
| Gene length (bp) | 846 |
| Transcript length (bp) | 846 |
| Coding sequence length (bp) | 846 |
| Protein length (aa) | 282 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01375 | Enterotoxin_a | Heat-labile enterotoxin alpha chain | 8.9E-21 | 41 | 230 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P43528|E2BA_ECOLX | Heat-labile enterotoxin IIB, A chain OS=Escherichia coli PE=1 SV=2 | 35 | 236 | 1.0E-12 |
| sp|P01555|CHTA_VIBCH | Cholera enterotoxin subunit A OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=ctxA PE=1 SV=1 | 41 | 231 | 2.0E-11 |
| sp|P13810|E2AA_ECOLX | Heat-labile enterotoxin IIA, A chain OS=Escherichia coli PE=3 SV=1 | 42 | 231 | 8.0E-11 |
| sp|P06717|ELAP_ECOLX | Heat-labile enterotoxin A chain OS=Escherichia coli GN=eltA PE=1 SV=1 | 41 | 231 | 7.0E-10 |
| sp|P43530|ELAH_ECOH1 | Heat-labile enterotoxin A chain OS=Escherichia coli O78:H11 (strain H10407 / ETEC) GN=eltA PE=3 SV=1 | 41 | 231 | 8.0E-10 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P43528|E2BA_ECOLX | Heat-labile enterotoxin IIB, A chain OS=Escherichia coli PE=1 SV=2 | 35 | 236 | 1.0E-12 |
| sp|P01555|CHTA_VIBCH | Cholera enterotoxin subunit A OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=ctxA PE=1 SV=1 | 41 | 231 | 2.0E-11 |
| sp|P13810|E2AA_ECOLX | Heat-labile enterotoxin IIA, A chain OS=Escherichia coli PE=3 SV=1 | 42 | 231 | 8.0E-11 |
| sp|P06717|ELAP_ECOLX | Heat-labile enterotoxin A chain OS=Escherichia coli GN=eltA PE=1 SV=1 | 41 | 231 | 7.0E-10 |
| sp|P43530|ELAH_ECOH1 | Heat-labile enterotoxin A chain OS=Escherichia coli O78:H11 (strain H10407 / ETEC) GN=eltA PE=3 SV=1 | 41 | 231 | 8.0E-10 |
| sp|A2PU44|CHELT_VIBCL | NAD(+)--arginine ADP-ribosyltransferase Chelt OS=Vibrio cholerae GN=A51_B1772 PE=1 SV=1 | 35 | 165 | 3.0E-08 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0090729 | toxin activity | Yes |
| GO:0005615 | extracellular space | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0003674 | molecular_function | No |
| GO:0005575 | cellular_component | No |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 18 | 0.999766 |
| Orthofinder run ID | 4 |
| Orthogroup | 18 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|7869 MKAPLAILLWLFSSVVLAAPQASSSPNEVRKQWRITLPFWVFRGEWRSPTTLKAQGGFIPYSISPPTEKGYGLLN HQQNKVLDAQGHKDTVYVSTSALFDAAAKFACTMSNGGYLLGGRNRFVYLIHASPNMISMTESLLQFDDFPGEEE FTAMGGILWEQVYGWVRLPDTYRAIDPEKTRHGHSSFYDMVRGHFSFNPDYNSNKFKDQPASGGQFRLAGVPKSE WPWSHYQQKSMRDAALDFMDQVGWVVDWQGDFPLIAPRPGVTSSENADDPSTWLDK* |
| Coding | >OphauB2|7869 ATGAAAGCTCCCCTTGCTATTCTTCTCTGGCTCTTCAGCTCTGTGGTGTTGGCAGCACCCCAAGCATCATCGTCA CCGAACGAAGTACGTAAGCAATGGCGGATAACGCTGCCTTTTTGGGTCTTTCGAGGCGAGTGGAGATCACCAACA ACGCTGAAAGCTCAAGGGGGATTTATACCATACTCTATCAGTCCTCCGACAGAAAAGGGTTATGGGCTGCTCAAC CATCAACAGAATAAGGTGCTAGATGCTCAAGGCCACAAGGACACCGTTTACGTATCTACTAGCGCCTTGTTTGAC GCAGCAGCAAAATTTGCATGTACTATGAGCAACGGTGGCTATCTGCTTGGAGGCAGAAACCGTTTTGTTTACCTG ATTCATGCGTCACCAAACATGATTTCCATGACCGAGTCGCTGCTGCAGTTTGACGATTTCCCAGGAGAAGAAGAG TTTACGGCCATGGGCGGCATTTTGTGGGAGCAGGTCTATGGCTGGGTTCGATTGCCAGATACCTACAGGGCAATA GACCCGGAGAAAACACGCCATGGACACTCGAGTTTCTATGACATGGTGCGTGGGCACTTTTCATTCAATCCAGAT TACAACAGCAACAAGTTCAAGGATCAGCCGGCTAGCGGCGGCCAATTCCGCCTAGCGGGCGTGCCAAAATCAGAA TGGCCGTGGAGTCATTACCAACAGAAATCTATGCGAGACGCTGCCTTGGATTTTATGGACCAAGTAGGCTGGGTT GTGGACTGGCAGGGAGATTTCCCCTTGATCGCCCCTAGGCCAGGAGTGACGAGCAGCGAAAACGCCGACGACCCA TCGACTTGGCTCGACAAGTAA |
| Transcript | >OphauB2|7869 ATGAAAGCTCCCCTTGCTATTCTTCTCTGGCTCTTCAGCTCTGTGGTGTTGGCAGCACCCCAAGCATCATCGTCA CCGAACGAAGTACGTAAGCAATGGCGGATAACGCTGCCTTTTTGGGTCTTTCGAGGCGAGTGGAGATCACCAACA ACGCTGAAAGCTCAAGGGGGATTTATACCATACTCTATCAGTCCTCCGACAGAAAAGGGTTATGGGCTGCTCAAC CATCAACAGAATAAGGTGCTAGATGCTCAAGGCCACAAGGACACCGTTTACGTATCTACTAGCGCCTTGTTTGAC GCAGCAGCAAAATTTGCATGTACTATGAGCAACGGTGGCTATCTGCTTGGAGGCAGAAACCGTTTTGTTTACCTG ATTCATGCGTCACCAAACATGATTTCCATGACCGAGTCGCTGCTGCAGTTTGACGATTTCCCAGGAGAAGAAGAG TTTACGGCCATGGGCGGCATTTTGTGGGAGCAGGTCTATGGCTGGGTTCGATTGCCAGATACCTACAGGGCAATA GACCCGGAGAAAACACGCCATGGACACTCGAGTTTCTATGACATGGTGCGTGGGCACTTTTCATTCAATCCAGAT TACAACAGCAACAAGTTCAAGGATCAGCCGGCTAGCGGCGGCCAATTCCGCCTAGCGGGCGTGCCAAAATCAGAA TGGCCGTGGAGTCATTACCAACAGAAATCTATGCGAGACGCTGCCTTGGATTTTATGGACCAAGTAGGCTGGGTT GTGGACTGGCAGGGAGATTTCCCCTTGATCGCCCCTAGGCCAGGAGTGACGAGCAGCGAAAACGCCGACGACCCA TCGACTTGGCTCGACAAGTAA |
| Gene | >OphauB2|7869 ATGAAAGCTCCCCTTGCTATTCTTCTCTGGCTCTTCAGCTCTGTGGTGTTGGCAGCACCCCAAGCATCATCGTCA CCGAACGAAGTACGTAAGCAATGGCGGATAACGCTGCCTTTTTGGGTCTTTCGAGGCGAGTGGAGATCACCAACA ACGCTGAAAGCTCAAGGGGGATTTATACCATACTCTATCAGTCCTCCGACAGAAAAGGGTTATGGGCTGCTCAAC CATCAACAGAATAAGGTGCTAGATGCTCAAGGCCACAAGGACACCGTTTACGTATCTACTAGCGCCTTGTTTGAC GCAGCAGCAAAATTTGCATGTACTATGAGCAACGGTGGCTATCTGCTTGGAGGCAGAAACCGTTTTGTTTACCTG ATTCATGCGTCACCAAACATGATTTCCATGACCGAGTCGCTGCTGCAGTTTGACGATTTCCCAGGAGAAGAAGAG TTTACGGCCATGGGCGGCATTTTGTGGGAGCAGGTCTATGGCTGGGTTCGATTGCCAGATACCTACAGGGCAATA GACCCGGAGAAAACACGCCATGGACACTCGAGTTTCTATGACATGGTGCGTGGGCACTTTTCATTCAATCCAGAT TACAACAGCAACAAGTTCAAGGATCAGCCGGCTAGCGGCGGCCAATTCCGCCTAGCGGGCGTGCCAAAATCAGAA TGGCCGTGGAGTCATTACCAACAGAAATCTATGCGAGACGCTGCCTTGGATTTTATGGACCAAGTAGGCTGGGTT GTGGACTGGCAGGGAGATTTCCCCTTGATCGCCCCTAGGCCAGGAGTGACGAGCAGCGAAAACGCCGACGACCCA TCGACTTGGCTCGACAAGTAA |