Protein ID | OphauB2|7867 |
Gene name | |
Location | Contig_9:164385..165051 |
Strand | - |
Gene length (bp) | 666 |
Transcript length (bp) | 666 |
Coding sequence length (bp) | 666 |
Protein length (aa) | 222 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF07947 | YhhN | YhhN family | 2.0E-31 | 35 | 216 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|P64838|Y1436_MYCBO | Uncharacterized membrane protein Mb1436 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=Mb1436 PE=3 SV=2 | 57 | 221 | 6.0E-06 |
sp|P9WG51|Y1401_MYCTU | Uncharacterized membrane protein Rv1401 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv1401 PE=1 SV=2 | 57 | 221 | 6.0E-06 |
sp|P9WG50|Y1401_MYCTO | Uncharacterized membrane protein MT1445 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=MT1445 PE=3 SV=2 | 57 | 221 | 6.0E-06 |
GO Term | Description | Terminal node |
---|---|---|
GO:0016021 | integral component of membrane | Yes |
GO:0031224 | intrinsic component of membrane | No |
GO:0110165 | cellular anatomical entity | No |
GO:0005575 | cellular_component | No |
Domain # | Start | End | Length |
---|---|---|---|
1 | 44 | 66 | 22 |
2 | 81 | 103 | 22 |
3 | 110 | 132 | 22 |
4 | 142 | 161 | 19 |
5 | 166 | 188 | 22 |
6 | 198 | 220 | 22 |
Orthofinder run ID | 4 |
Orthogroup | 4934 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >OphauB2|7867 MTALETALESALVCGSIGAALQYGRQVCAPASRSRMASKTVSTMLLALLAATGGPSWLLTLALGLCAIGDGFLAW PGDACFLCGLGSFLAAHVCYTLLYCRLGHGLGSMLALSRLAAAAFLAALTATAVCVLVPRVDKHMKIPIVLYAAT ILIMALTALTLQNRALVITGSVCLVLSDAVLAADEFLVATDYQYRSRMQIFVWLSYYLGQLLVTSGLTMYR* |
Coding | >OphauB2|7867 ATGACTGCCCTTGAGACTGCCCTTGAATCCGCTCTAGTCTGCGGCTCCATTGGCGCAGCACTGCAGTATGGGAGG CAGGTTTGTGCGCCCGCAAGCAGGTCCCGCATGGCGTCCAAGACTGTCTCAACGATGCTGCTGGCCCTCTTAGCG GCCACAGGCGGGCCGTCGTGGCTGCTTACACTTGCCCTGGGCCTGTGCGCAATTGGCGATGGGTTCCTCGCATGG CCTGGCGACGCATGCTTTTTGTGTGGTCTCGGCAGCTTCCTGGCGGCTCATGTCTGCTACACGTTGCTCTATTGC CGACTCGGTCACGGCCTCGGCTCAATGCTGGCCTTGTCGAGACTTGCCGCCGCTGCATTCCTCGCCGCACTGACG GCCACGGCTGTTTGCGTCTTGGTGCCACGCGTCGACAAGCACATGAAGATACCTATTGTCTTGTACGCCGCTACT ATCCTGATAATGGCTCTGACGGCCCTCACTCTGCAAAACCGCGCACTCGTCATCACTGGAAGCGTGTGCCTGGTC TTGTCAGACGCAGTGTTGGCAGCCGACGAGTTTCTGGTTGCCACTGATTACCAATATCGATCAAGGATGCAGATT TTTGTCTGGCTGTCATACTACCTGGGACAGCTCCTGGTTACCTCTGGGCTTACTATGTACCGATAG |
Transcript | >OphauB2|7867 ATGACTGCCCTTGAGACTGCCCTTGAATCCGCTCTAGTCTGCGGCTCCATTGGCGCAGCACTGCAGTATGGGAGG CAGGTTTGTGCGCCCGCAAGCAGGTCCCGCATGGCGTCCAAGACTGTCTCAACGATGCTGCTGGCCCTCTTAGCG GCCACAGGCGGGCCGTCGTGGCTGCTTACACTTGCCCTGGGCCTGTGCGCAATTGGCGATGGGTTCCTCGCATGG CCTGGCGACGCATGCTTTTTGTGTGGTCTCGGCAGCTTCCTGGCGGCTCATGTCTGCTACACGTTGCTCTATTGC CGACTCGGTCACGGCCTCGGCTCAATGCTGGCCTTGTCGAGACTTGCCGCCGCTGCATTCCTCGCCGCACTGACG GCCACGGCTGTTTGCGTCTTGGTGCCACGCGTCGACAAGCACATGAAGATACCTATTGTCTTGTACGCCGCTACT ATCCTGATAATGGCTCTGACGGCCCTCACTCTGCAAAACCGCGCACTCGTCATCACTGGAAGCGTGTGCCTGGTC TTGTCAGACGCAGTGTTGGCAGCCGACGAGTTTCTGGTTGCCACTGATTACCAATATCGATCAAGGATGCAGATT TTTGTCTGGCTGTCATACTACCTGGGACAGCTCCTGGTTACCTCTGGGCTTACTATGTACCGATAG |
Gene | >OphauB2|7867 ATGACTGCCCTTGAGACTGCCCTTGAATCCGCTCTAGTCTGCGGCTCCATTGGCGCAGCACTGCAGTATGGGAGG CAGGTTTGTGCGCCCGCAAGCAGGTCCCGCATGGCGTCCAAGACTGTCTCAACGATGCTGCTGGCCCTCTTAGCG GCCACAGGCGGGCCGTCGTGGCTGCTTACACTTGCCCTGGGCCTGTGCGCAATTGGCGATGGGTTCCTCGCATGG CCTGGCGACGCATGCTTTTTGTGTGGTCTCGGCAGCTTCCTGGCGGCTCATGTCTGCTACACGTTGCTCTATTGC CGACTCGGTCACGGCCTCGGCTCAATGCTGGCCTTGTCGAGACTTGCCGCCGCTGCATTCCTCGCCGCACTGACG GCCACGGCTGTTTGCGTCTTGGTGCCACGCGTCGACAAGCACATGAAGATACCTATTGTCTTGTACGCCGCTACT ATCCTGATAATGGCTCTGACGGCCCTCACTCTGCAAAACCGCGCACTCGTCATCACTGGAAGCGTGTGCCTGGTC TTGTCAGACGCAGTGTTGGCAGCCGACGAGTTTCTGGTTGCCACTGATTACCAATATCGATCAAGGATGCAGATT TTTGTCTGGCTGTCATACTACCTGGGACAGCTCCTGGTTACCTCTGGGCTTACTATGTACCGATAG |