© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|7861 |
| Gene name | |
| Location | Contig_9:150886..152142 |
| Strand | - |
| Gene length (bp) | 1256 |
| Transcript length (bp) | 1131 |
| Coding sequence length (bp) | 1131 |
| Protein length (aa) | 377 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00561 | Abhydrolase_1 | alpha/beta hydrolase fold | 1.6E-13 | 100 | 196 |
| PF12697 | Abhydrolase_6 | Alpha/beta hydrolase family | 6.5E-13 | 84 | 363 |
| PF12146 | Hydrolase_4 | Serine aminopeptidase, S33 | 3.7E-09 | 103 | 340 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|A8IAD8|RUTD_AZOC5 | Putative aminoacrylate hydrolase RutD OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 / NBRC 14845 / NCIMB 13405 / ORS 571) GN=rutD PE=3 SV=1 | 45 | 223 | 4.0E-13 |
| sp|P9WNH1|BPOC_MYCTU | Putative non-heme bromoperoxidase BpoC OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=bpoC PE=1 SV=1 | 52 | 185 | 3.0E-08 |
| sp|P9WNH0|BPOC_MYCTO | Putative non-heme bromoperoxidase BpoC OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=bpoC PE=3 SV=1 | 52 | 185 | 3.0E-08 |
| sp|Q59695|ACOC_PSEPU | Dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system OS=Pseudomonas putida GN=acoC PE=3 SV=1 | 55 | 180 | 1.0E-07 |
| sp|B1ZB18|RUTD_METPB | Putative aminoacrylate hydrolase RutD OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=rutD PE=3 SV=1 | 96 | 223 | 5.0E-07 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|A8IAD8|RUTD_AZOC5 | Putative aminoacrylate hydrolase RutD OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 / NBRC 14845 / NCIMB 13405 / ORS 571) GN=rutD PE=3 SV=1 | 45 | 223 | 4.0E-13 |
| sp|P9WNH1|BPOC_MYCTU | Putative non-heme bromoperoxidase BpoC OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=bpoC PE=1 SV=1 | 52 | 185 | 3.0E-08 |
| sp|P9WNH0|BPOC_MYCTO | Putative non-heme bromoperoxidase BpoC OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=bpoC PE=3 SV=1 | 52 | 185 | 3.0E-08 |
| sp|Q59695|ACOC_PSEPU | Dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system OS=Pseudomonas putida GN=acoC PE=3 SV=1 | 55 | 180 | 1.0E-07 |
| sp|B1ZB18|RUTD_METPB | Putative aminoacrylate hydrolase RutD OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=rutD PE=3 SV=1 | 96 | 223 | 5.0E-07 |
| sp|C5CN82|RUTD_VARPS | Putative aminoacrylate hydrolase RutD OS=Variovorax paradoxus (strain S110) GN=rutD PE=3 SV=1 | 104 | 177 | 4.0E-06 |
| sp|D5VGV3|RUTD_CAUST | Putative aminoacrylate hydrolase RutD OS=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) GN=rutD PE=3 SV=1 | 96 | 182 | 8.0E-06 |
| Orthofinder run ID | 4 |
| Orthogroup | 3036 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|7861 MTDASSSGPSLDQLPTEQQTLAHAAFPGAIWALRPDKKGVTSVAHDRGGPFDIAWEIHGSGPIKLVFIMGFLGLM TTWQRQTCFFGHDQGKARGDEAKARADTYSVLIFDNRGVGSSGRPLMRYSTSEMARDTLELVDAIGWTGPRQLHV IGISLGGMIAQELACVAPQRLASLSLICTSARLPRGPSVLLAFAKRVVFAMLPLPQDEAFRRLAVSVFPMQWLLA PDEDDLPSPASTPGCGPPGSLGPAQGSCAPGAEYGHFDCNFQRFQAQTLTNSRNPAFAPARIMCQGIAAGWHCKT DEQLRAMADAVGRERILVLHGTLDAMIGVEHGRRLIDVLEPADGLIIEGLGHAPIMQRAKWFNQLLEQKFSVCAR L* |
| Coding | >OphauB2|7861 ATGACGGACGCATCCTCGTCAGGGCCGTCGTTGGACCAGCTCCCCACGGAGCAGCAGACGCTTGCACATGCTGCA TTCCCAGGAGCAATATGGGCGCTGCGGCCAGACAAGAAGGGAGTAACAAGCGTCGCCCATGACCGAGGCGGGCCT TTTGACATTGCTTGGGAGATTCACGGCTCGGGGCCAATCAAACTGGTGTTCATCATGGGTTTTCTTGGTCTCATG ACGACATGGCAGCGGCAGACTTGCTTCTTCGGACACGACCAAGGCAAGGCGCGAGGCGACGAGGCCAAAGCGAGA GCAGACACCTACTCTGTCCTCATATTCGACAATCGCGGCGTGGGCAGCAGCGGGCGCCCGCTGATGCGCTACTCG ACGAGCGAAATGGCGCGCGACACTCTGGAGCTGGTGGATGCCATTGGCTGGACAGGCCCTCGTCAGCTGCATGTC ATTGGCATCTCGCTAGGCGGCATGATTGCCCAGGAGCTGGCCTGTGTCGCGCCGCAGCGCCTGGCATCACTGAGC CTCATATGTACTTCGGCACGCTTGCCGCGAGGGCCCTCGGTCCTGCTCGCTTTTGCCAAGCGCGTCGTCTTTGCC ATGCTGCCTCTGCCGCAAGACGAGGCCTTTCGCAGATTAGCAGTATCAGTCTTCCCCATGCAGTGGCTTCTTGCT CCCGACGAGGACGACTTGCCCTCGCCTGCCTCGACGCCCGGCTGCGGCCCCCCTGGCTCTCTTGGGCCTGCGCAA GGCTCCTGTGCGCCGGGCGCAGAGTACGGCCACTTTGACTGCAATTTTCAGCGATTTCAGGCCCAGACGCTGACG AATAGCCGCAATCCGGCCTTTGCGCCCGCCAGAATCATGTGCCAGGGCATTGCTGCTGGCTGGCACTGCAAGACG GACGAGCAGCTGCGCGCCATGGCCGATGCTGTTGGGCGAGAGCGCATCCTGGTGCTGCATGGCACTCTGGACGCC ATGATTGGTGTTGAGCACGGGCGAAGGCTCATTGATGTCTTGGAGCCGGCGGATGGGCTCATCATTGAGGGATTA GGCCACGCGCCCATTATGCAGCGCGCAAAGTGGTTTAACCAGCTGCTCGAGCAGAAATTCTCCGTCTGCGCACGT CTTTGA |
| Transcript | >OphauB2|7861 ATGACGGACGCATCCTCGTCAGGGCCGTCGTTGGACCAGCTCCCCACGGAGCAGCAGACGCTTGCACATGCTGCA TTCCCAGGAGCAATATGGGCGCTGCGGCCAGACAAGAAGGGAGTAACAAGCGTCGCCCATGACCGAGGCGGGCCT TTTGACATTGCTTGGGAGATTCACGGCTCGGGGCCAATCAAACTGGTGTTCATCATGGGTTTTCTTGGTCTCATG ACGACATGGCAGCGGCAGACTTGCTTCTTCGGACACGACCAAGGCAAGGCGCGAGGCGACGAGGCCAAAGCGAGA GCAGACACCTACTCTGTCCTCATATTCGACAATCGCGGCGTGGGCAGCAGCGGGCGCCCGCTGATGCGCTACTCG ACGAGCGAAATGGCGCGCGACACTCTGGAGCTGGTGGATGCCATTGGCTGGACAGGCCCTCGTCAGCTGCATGTC ATTGGCATCTCGCTAGGCGGCATGATTGCCCAGGAGCTGGCCTGTGTCGCGCCGCAGCGCCTGGCATCACTGAGC CTCATATGTACTTCGGCACGCTTGCCGCGAGGGCCCTCGGTCCTGCTCGCTTTTGCCAAGCGCGTCGTCTTTGCC ATGCTGCCTCTGCCGCAAGACGAGGCCTTTCGCAGATTAGCAGTATCAGTCTTCCCCATGCAGTGGCTTCTTGCT CCCGACGAGGACGACTTGCCCTCGCCTGCCTCGACGCCCGGCTGCGGCCCCCCTGGCTCTCTTGGGCCTGCGCAA GGCTCCTGTGCGCCGGGCGCAGAGTACGGCCACTTTGACTGCAATTTTCAGCGATTTCAGGCCCAGACGCTGACG AATAGCCGCAATCCGGCCTTTGCGCCCGCCAGAATCATGTGCCAGGGCATTGCTGCTGGCTGGCACTGCAAGACG GACGAGCAGCTGCGCGCCATGGCCGATGCTGTTGGGCGAGAGCGCATCCTGGTGCTGCATGGCACTCTGGACGCC ATGATTGGTGTTGAGCACGGGCGAAGGCTCATTGATGTCTTGGAGCCGGCGGATGGGCTCATCATTGAGGGATTA GGCCACGCGCCCATTATGCAGCGCGCAAAGTGGTTTAACCAGCTGCTCGAGCAGAAATTCTCCGTCTGCGCACGT CTTTGA |
| Gene | >OphauB2|7861 ATGACGGACGCGTAAGAAGTTGCGGGCAATCCATGGTTGTCTATTTGGCTTATCAGTACCTAGATCCTCGTCAGG GCCGTCGTTGGACCAGCTCCCCACGGAGCAGCAGACGCTTGCACATGCTGCATTCCCAGGAGCAATATGGGCGCT GCGGCCAGACAAGAAGGGAGTAACAAGCGTCGCCCATGACCGAGGCGGGCCTTTTGACATTGCTTGGGAGATTCA CGGCTCGGGGCCAATCAAACTGGTGGTGCGTGGTCCCCGTAGACAGGCTCTAGACATGGCTGACAGCTGGCTCGC CACTGGGGCATTGGAATAAACAGTTCATCATGGGTTTTCTTGGTCTCATGACGACATGGCAGCGGCAGACTTGCT TCTTCGGACACGACCAAGGCAAGGCGCGAGGCGACGAGGCCAAAGCGAGAGCAGACACCTACTCTGTCCTCATAT TCGACAATCGCGGCGTGGGCAGCAGCGGGCGCCCGCTGATGCGCTACTCGACGAGCGAAATGGCGCGCGACACTC TGGAGCTGGTGGATGCCATTGGCTGGACAGGCCCTCGTCAGCTGCATGTCATTGGCATCTCGCTAGGCGGCATGA TTGCCCAGGAGCTGGCCTGTGTCGCGCCGCAGCGCCTGGCATCACTGAGCCTCATATGTACTTCGGCACGCTTGC CGCGAGGGCCCTCGGTCCTGCTCGCTTTTGCCAAGCGCGTCGTCTTTGCCATGCTGCCTCTGCCGCAAGACGAGG CCTTTCGCAGATTAGCAGTATCAGTCTTCCCCATGCAGTGGCTTCTTGCTCCCGACGAGGACGACTTGCCCTCGC CTGCCTCGACGCCCGGCTGCGGCCCCCCTGGCTCTCTTGGGCCTGCGCAAGGCTCCTGTGCGCCGGGCGCAGAGT ACGGCCACTTTGACTGCAATTTTCAGCGATTTCAGGCCCAGACGCTGACGAATAGCCGCAATCCGGCCTTTGCGC CCGCCAGAATCATGTGCCAGGGCATTGCTGCTGGCTGGCACTGCAAGACGGACGAGCAGCTGCGCGCCATGGCCG ATGCTGTTGGGCGAGAGCGCATCCTGGTGCTGCATGGCACTCTGGACGCCATGATTGGTGTTGAGCACGGGCGAA GGCTCATTGATGTCTTGGAGCCGGCGGATGGGCTCATCATTGAGGGATTAGGCCACGCGCCCATTATGCAGCGCG CAAAGTGGTTTAACCAGCTGCTCGAGCAGAAATTCTCCGTCTGCGCACGTCTTTGA |