Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauB2\|786
Gene name
Location	Contig_117:12961..13991
Strand	-
Gene length (bp)	1030
Transcript length (bp)	972
Coding sequence length (bp)	972
Protein length (aa)	324

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF04982	HPP	HPP family	1.1E-42	85	209

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q55EF8\|Y9096_DICDI	Transmembrane protein DDB_G0269096 OS=Dictyostelium discoideum GN=DDB_G0269096 PE=4 SV=1	30	213	8.0E-21
sp\|Q556Z9\|Y3361_DICDI	Transmembrane protein DDB_G0273707/DDB_G0273361 OS=Dictyostelium discoideum GN=DDB_G0273707 PE=4 SV=2	34	213	2.0E-19

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 11	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	44	66	22
2	79	100	21
3	110	132	22
4	139	156	17
5	179	201	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauB2\|786 MPPRHWAWNFDIDRFLNPFVPRPPWRHVPYPIAHFLGYRKTKPQATGNVVPVFWSFIGIFCAIIIIEQATKHVSA FEDNGVPTVIVGSFGAAAVLQFYAIESPLAQPRNAIGGQLLSSIIGVGIAKLFRLSHRFDDIQWLGGALACATAT ALMGLTKTMHPPAGATALLAVADKKLLDLGWWLIPVMMLGCALMLGVALILNNIERRFPMYWWTPDDLCQGKSIL QRVRESTPPKPPNKSVIDEEKAIASRGSSDGTEPGVLQPQPGATDGAANAPETGATGNAVARGDQEYLIIKHGKV IVPKDMLLSQEEEQLLETMSYRL*
Coding	>OphauB2\|786 ATGCCGCCGCGACATTGGGCGTGGAATTTTGACATTGATCGCTTCCTCAACCCCTTTGTCCCTCGGCCACCATGG CGCCATGTGCCCTACCCTATAGCCCATTTCCTGGGCTACCGCAAGACGAAGCCGCAAGCCACTGGGAACGTGGTG CCTGTATTTTGGTCCTTTATCGGCATTTTCTGCGCCATCATCATCATTGAACAGGCTACCAAGCACGTGTCTGCG TTTGAGGACAACGGAGTGCCCACAGTAATTGTGGGTTCGTTTGGCGCCGCGGCGGTGCTCCAATTCTACGCCATT GAGTCACCTCTGGCTCAGCCGCGCAACGCCATTGGCGGCCAGCTCTTGTCTAGTATCATTGGAGTTGGCATTGCA AAGTTGTTTCGCTTGAGCCATCGTTTTGATGATATTCAATGGCTTGGCGGAGCGTTGGCGTGTGCTACAGCCACG GCTCTCATGGGCCTCACCAAGACTATGCATCCTCCGGCCGGTGCGACAGCGCTTCTTGCTGTTGCTGACAAGAAA CTGCTCGATTTGGGCTGGTGGCTCATTCCCGTCATGATGCTCGGATGTGCCCTCATGCTTGGCGTTGCCCTTATT CTCAACAATATTGAACGCCGATTTCCAATGTACTGGTGGACGCCCGATGATTTGTGCCAAGGCAAATCGATTCTG CAACGAGTGCGCGAGAGCACACCTCCCAAGCCACCCAACAAGTCTGTAATTGATGAGGAAAAGGCGATTGCATCA CGCGGTAGCAGCGATGGTACAGAGCCTGGCGTCTTGCAGCCGCAGCCAGGCGCGACGGACGGGGCAGCAAACGCT CCAGAGACTGGAGCCACCGGCAACGCGGTGGCGCGCGGAGATCAGGAATATCTCATCATCAAGCACGGCAAGGTC ATTGTGCCCAAAGACATGTTGTTGTCACAGGAAGAAGAGCAATTGCTAGAAACCATGAGCTACAGGCTTTAA
Transcript	>OphauB2\|786 ATGCCGCCGCGACATTGGGCGTGGAATTTTGACATTGATCGCTTCCTCAACCCCTTTGTCCCTCGGCCACCATGG CGCCATGTGCCCTACCCTATAGCCCATTTCCTGGGCTACCGCAAGACGAAGCCGCAAGCCACTGGGAACGTGGTG CCTGTATTTTGGTCCTTTATCGGCATTTTCTGCGCCATCATCATCATTGAACAGGCTACCAAGCACGTGTCTGCG TTTGAGGACAACGGAGTGCCCACAGTAATTGTGGGTTCGTTTGGCGCCGCGGCGGTGCTCCAATTCTACGCCATT GAGTCACCTCTGGCTCAGCCGCGCAACGCCATTGGCGGCCAGCTCTTGTCTAGTATCATTGGAGTTGGCATTGCA AAGTTGTTTCGCTTGAGCCATCGTTTTGATGATATTCAATGGCTTGGCGGAGCGTTGGCGTGTGCTACAGCCACG GCTCTCATGGGCCTCACCAAGACTATGCATCCTCCGGCCGGTGCGACAGCGCTTCTTGCTGTTGCTGACAAGAAA CTGCTCGATTTGGGCTGGTGGCTCATTCCCGTCATGATGCTCGGATGTGCCCTCATGCTTGGCGTTGCCCTTATT CTCAACAATATTGAACGCCGATTTCCAATGTACTGGTGGACGCCCGATGATTTGTGCCAAGGCAAATCGATTCTG CAACGAGTGCGCGAGAGCACACCTCCCAAGCCACCCAACAAGTCTGTAATTGATGAGGAAAAGGCGATTGCATCA CGCGGTAGCAGCGATGGTACAGAGCCTGGCGTCTTGCAGCCGCAGCCAGGCGCGACGGACGGGGCAGCAAACGCT CCAGAGACTGGAGCCACCGGCAACGCGGTGGCGCGCGGAGATCAGGAATATCTCATCATCAAGCACGGCAAGGTC ATTGTGCCCAAAGACATGTTGTTGTCACAGGAAGAAGAGCAATTGCTAGAAACCATGAGCTACAGGCTTTAA
Gene	>OphauB2\|786 ATGCCGCCGCGACATTGGGCGTGGAATTTTGACATTGATCGCTTCCTCAACCCCTTTGTCCCTCGGCCACCATGG CGCCATGTGCCCTACCCTATAGCCCATTTCCTGGGCTACCGCAAGACGAAGCCGCAAGCCACTGGGAACGTGGTG CCTGTATTTTGGTCCTTTATCGGCATTTTCTGCGCCATCATCATCATTGAACAGGCTACCAAGCACGTGTCTGCG TTTGAGGACAACGGAGTGCCCACAGTAATTGTGGGTTCGTTTGTAAGTGATGATATTGATGTGACTTGGCTGCTT TGTGCTGACGCGAGGCATCTGACAGGGCGCCGCGGCGGTGCTCCAATTCTACGCCATTGAGTCACCTCTGGCTCA GCCGCGCAACGCCATTGGCGGCCAGCTCTTGTCTAGTATCATTGGAGTTGGCATTGCAAAGTTGTTTCGCTTGAG CCATCGTTTTGATGATATTCAATGGCTTGGCGGAGCGTTGGCGTGTGCTACAGCCACGGCTCTCATGGGCCTCAC CAAGACTATGCATCCTCCGGCCGGTGCGACAGCGCTTCTTGCTGTTGCTGACAAGAAACTGCTCGATTTGGGCTG GTGGCTCATTCCCGTCATGATGCTCGGATGTGCCCTCATGCTTGGCGTTGCCCTTATTCTCAACAATATTGAACG CCGATTTCCAATGTACTGGTGGACGCCCGATGATTTGTGCCAAGGCAAATCGATTCTGCAACGAGTGCGCGAGAG CACACCTCCCAAGCCACCCAACAAGTCTGTAATTGATGAGGAAAAGGCGATTGCATCACGCGGTAGCAGCGATGG TACAGAGCCTGGCGTCTTGCAGCCGCAGCCAGGCGCGACGGACGGGGCAGCAAACGCTCCAGAGACTGGAGCCAC CGGCAACGCGGTGGCGCGCGGAGATCAGGAATATCTCATCATCAAGCACGGCAAGGTCATTGTGCCCAAAGACAT GTTGTTGTCACAGGAAGAAGAGCAATTGCTAGAAACCATGAGCTACAGGCTTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail