Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|7806
Gene name
LocationContig_89:76820..78717
Strand-
Gene length (bp)1897
Transcript length (bp)1722
Coding sequence length (bp)1722
Protein length (aa) 574

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04146 YTH YT521-B-like domain 1.2E-67 348 548

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q0DA50|C3H45_ORYSJ Zinc finger CCCH domain-containing protein 45 OS=Oryza sativa subsp. japonica GN=Os06g0677700 PE=3 SV=1 349 412 9.0E-13
sp|A9LNK9|CPSF_ARATH 30-kDa cleavage and polyadenylation specificity factor 30 OS=Arabidopsis thaliana GN=CPSF30 PE=1 SV=1 348 412 5.0E-12
sp|Q5R746|YTDC2_PONAB YTH domain-containing protein 2 OS=Pongo abelii GN=YTHDC2 PE=2 SV=1 349 415 1.0E-11
sp|A9LNK9|CPSF_ARATH 30-kDa cleavage and polyadenylation specificity factor 30 OS=Arabidopsis thaliana GN=CPSF30 PE=1 SV=1 488 547 4.0E-11
sp|B2RR83|YTDC2_MOUSE Probable ATP-dependent RNA helicase YTHDC2 OS=Mus musculus GN=Ythdc2 PE=1 SV=1 349 415 4.0E-11
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Swissprot ID Swissprot Description Start End E-value
sp|Q0DA50|C3H45_ORYSJ Zinc finger CCCH domain-containing protein 45 OS=Oryza sativa subsp. japonica GN=Os06g0677700 PE=3 SV=1 349 412 9.0E-13
sp|A9LNK9|CPSF_ARATH 30-kDa cleavage and polyadenylation specificity factor 30 OS=Arabidopsis thaliana GN=CPSF30 PE=1 SV=1 348 412 5.0E-12
sp|Q5R746|YTDC2_PONAB YTH domain-containing protein 2 OS=Pongo abelii GN=YTHDC2 PE=2 SV=1 349 415 1.0E-11
sp|A9LNK9|CPSF_ARATH 30-kDa cleavage and polyadenylation specificity factor 30 OS=Arabidopsis thaliana GN=CPSF30 PE=1 SV=1 488 547 4.0E-11
sp|B2RR83|YTDC2_MOUSE Probable ATP-dependent RNA helicase YTHDC2 OS=Mus musculus GN=Ythdc2 PE=1 SV=1 349 415 4.0E-11
sp|Q9H6S0|YTDC2_HUMAN Probable ATP-dependent RNA helicase YTHDC2 OS=Homo sapiens GN=YTHDC2 PE=1 SV=2 349 415 4.0E-11
sp|Q5R746|YTDC2_PONAB YTH domain-containing protein 2 OS=Pongo abelii GN=YTHDC2 PE=2 SV=1 483 550 8.0E-11
sp|B2RR83|YTDC2_MOUSE Probable ATP-dependent RNA helicase YTHDC2 OS=Mus musculus GN=Ythdc2 PE=1 SV=1 483 550 1.0E-10
sp|Q9H6S0|YTDC2_HUMAN Probable ATP-dependent RNA helicase YTHDC2 OS=Homo sapiens GN=YTHDC2 PE=1 SV=2 483 550 2.0E-10
sp|Q9QY02|YTDC1_RAT YTH domain-containing protein 1 OS=Rattus norvegicus GN=Ythdc1 PE=1 SV=2 349 411 6.0E-09
sp|Q96MU7|YTDC1_HUMAN YTH domain-containing protein 1 OS=Homo sapiens GN=YTHDC1 PE=1 SV=3 349 411 7.0E-09
sp|E9Q5K9|YTDC1_MOUSE YTH domain-containing protein 1 OS=Mus musculus GN=Ythdc1 PE=1 SV=2 349 411 8.0E-09
sp|Q0DA50|C3H45_ORYSJ Zinc finger CCCH domain-containing protein 45 OS=Oryza sativa subsp. japonica GN=Os06g0677700 PE=3 SV=1 490 547 1.0E-08
sp|P59326|YTHD1_MOUSE YTH domain-containing family protein 1 OS=Mus musculus GN=Ythdf1 PE=1 SV=1 337 420 4.0E-08
sp|Q9BYJ9|YTHD1_HUMAN YTH domain-containing family protein 1 OS=Homo sapiens GN=YTHDF1 PE=1 SV=1 349 420 1.0E-07
sp|Q06390|MRB1_YEAST Methylated RNA-binding protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PHO92 PE=1 SV=1 349 452 2.0E-07
sp|Q4R5D9|YTHD2_MACFA YTH domain-containing family protein 2 OS=Macaca fascicularis GN=YTHDF2 PE=2 SV=1 337 420 2.0E-07
sp|Q9Y5A9|YTHD2_HUMAN YTH domain-containing family protein 2 OS=Homo sapiens GN=YTHDF2 PE=1 SV=2 337 420 2.0E-07
sp|Q0VCZ3|YTHD2_BOVIN YTH domain-containing family protein 2 OS=Bos taurus GN=YTHDF2 PE=2 SV=1 337 420 2.0E-07
sp|Q91YT7|YTHD2_MOUSE YTH domain-containing family protein 2 OS=Mus musculus GN=Ythdf2 PE=1 SV=1 337 420 2.0E-07
sp|Q96MU7|YTDC1_HUMAN YTH domain-containing protein 1 OS=Homo sapiens GN=YTHDC1 PE=1 SV=3 492 547 3.0E-07
sp|E9Q5K9|YTDC1_MOUSE YTH domain-containing protein 1 OS=Mus musculus GN=Ythdc1 PE=1 SV=2 492 547 4.0E-07
sp|Q9QY02|YTDC1_RAT YTH domain-containing protein 1 OS=Rattus norvegicus GN=Ythdc1 PE=1 SV=2 492 547 4.0E-07
sp|Q5RFL8|YTHD3_PONAB YTH domain-containing family protein 3 OS=Pongo abelii GN=YTHDF3 PE=2 SV=1 337 420 5.0E-07
sp|Q7Z739|YTHD3_HUMAN YTH domain-containing family protein 3 OS=Homo sapiens GN=YTHDF3 PE=1 SV=1 337 420 5.0E-07
sp|Q8BYK6|YTHD3_MOUSE YTH domain-containing family protein 3 OS=Mus musculus GN=Ythdf3 PE=1 SV=2 337 420 5.0E-07
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GO

GO Term Description Terminal node
GO:0003723 RNA binding Yes
GO:0003674 molecular_function No
GO:0005488 binding No
GO:1901363 heterocyclic compound binding No
GO:0097159 organic cyclic compound binding No
GO:0003676 nucleic acid binding No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup407
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|7438
Ophiocordyceps australis map64 (Brazil) OphauB2|7806 (this protein)
Ophiocordyceps camponoti-floridani Ophcf2|07380
Ophiocordyceps camponoti-rufipedis Ophun1|3210
Ophiocordyceps kimflemingae Ophio5|5140
Ophiocordyceps subramaniannii Hirsu2|2237
Ophiocordyceps subramaniannii Hirsu2|7705
Ophiocordyceps subramaniannii Hirsu2|8182
Ophiocordyceps subramaniannii Hirsu2|8426

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|7806
MGDVPTASAPEAAQVSLAGVDANQKPSVKQQPNQPATIATSHQAFASQLDMASQQTQQGSYHVAPMGGYRPGQYP
PPAHRYMPPVMPPMAPVPQYGAPPMAYYMHQAPMSPYYAAGHGPPSHMQSPRHNMAYFANHVLMDQAQSPFYYQP
PAHEYSMPPQAQPMVVPAGLSTRSPDAPDARSPADGYDCLGDSNGTGPDQGHDGHKTVRGPPRKPRQSGHAIWIG
NLPPQTDLMSLVHHVCKETTGLESVFLISKSNCAFANFKDDKTCLAAQQTLHDSRYKTVRLVSRLRKNTVEGVAG
LTAPTGPALPPGDSTRGASPTLPSSSSLSPPTKPKASPAVVDGHAHQDRFFILKSLTMEDLELSVQTGIWATQSH
NEDTLNNAFKKYDSVYLIFSANKSGEYFGYARMMSEVNKDPEAAIEFAPKSQAASALQLPRAITTEATEHAPKGT
IIDDSARGTIFWEAERDDCDTASDNASDVSSNRSCEPDQGTKTWGKPFKLEWLSVSRLPFYRTRGLRNPWNSNRE
VKIARDGTELEPSVGRKLIGLFNRVQSPGLTSSMMRPPVPAMQVMAPM*
Coding >OphauB2|7806
ATGGGAGACGTGCCGACTGCTTCGGCCCCGGAGGCAGCACAAGTCTCTCTTGCTGGTGTCGACGCCAACCAAAAG
CCCAGCGTCAAGCAGCAGCCCAACCAGCCGGCGACGATAGCCACCAGCCACCAGGCCTTTGCGTCGCAGCTCGAC
ATGGCCAGCCAACAGACACAGCAAGGCTCATACCATGTGGCACCCATGGGCGGCTATCGTCCAGGCCAGTATCCT
CCGCCCGCGCACCGCTACATGCCCCCCGTCATGCCGCCCATGGCTCCGGTGCCTCAGTACGGAGCGCCGCCAATG
GCATACTACATGCATCAAGCGCCCATGAGCCCCTACTACGCCGCTGGCCATGGTCCGCCCTCGCACATGCAAAGC
CCCAGGCACAACATGGCCTACTTCGCCAACCATGTCCTCATGGACCAAGCCCAGTCTCCCTTTTACTACCAGCCG
CCAGCCCATGAGTATTCCATGCCGCCACAGGCCCAGCCCATGGTTGTGCCAGCTGGGCTCTCGACAAGGTCTCCT
GATGCTCCAGATGCACGCTCGCCAGCTGACGGCTATGATTGCCTTGGTGACAGCAATGGCACAGGCCCAGACCAA
GGCCACGACGGGCACAAGACGGTGCGAGGCCCTCCCAGAAAGCCCCGCCAGAGTGGGCACGCCATCTGGATTGGC
AACCTGCCCCCGCAGACAGACCTGATGAGTCTTGTCCACCACGTCTGCAAGGAGACCACAGGGCTCGAGTCCGTC
TTTCTCATTTCAAAGAGCAACTGCGCCTTTGCCAATTTCAAAGACGACAAGACGTGCCTGGCAGCCCAGCAAACG
CTGCACGATTCGAGATACAAGACGGTCCGCCTCGTCAGCCGCTTGCGCAAAAACACGGTCGAGGGCGTGGCTGGA
CTGACTGCGCCCACCGGGCCAGCTCTTCCTCCGGGCGACTCAACACGCGGTGCTTCTCCGACTTTGCCCTCGAGT
TCCAGTCTCAGCCCGCCCACCAAGCCCAAGGCCAGCCCGGCTGTCGTCGACGGCCATGCTCACCAAGACAGATTC
TTTATCCTCAAGAGCTTGACCATGGAGGACCTCGAGTTGAGCGTGCAGACTGGCATCTGGGCTACACAGTCACAC
AACGAGGACACCTTGAACAATGCCTTCAAGAAATACGACAGTGTCTACCTTATTTTCTCAGCCAACAAATCGGGC
GAGTACTTTGGCTATGCGCGCATGATGTCCGAGGTCAACAAAGATCCAGAAGCCGCCATTGAATTCGCACCCAAG
TCGCAGGCTGCCAGTGCTCTGCAGCTGCCCAGAGCAATCACCACAGAGGCAACCGAGCACGCACCCAAGGGCACA
ATCATTGATGACTCGGCTCGCGGCACCATTTTCTGGGAGGCGGAGCGTGACGACTGCGACACCGCCTCGGACAAT
GCCAGCGATGTGTCGAGCAACAGGAGCTGCGAGCCCGACCAAGGCACAAAGACGTGGGGCAAGCCCTTCAAACTC
GAGTGGCTCTCCGTTTCCCGACTACCCTTTTATAGAACAAGAGGCCTTCGAAATCCCTGGAACTCCAACAGAGAG
GTCAAGATTGCCCGAGATGGAACCGAGTTGGAGCCGTCGGTGGGTCGCAAGCTCATTGGCCTCTTCAACCGCGTC
CAGAGCCCGGGGCTGACATCGTCCATGATGCGTCCACCCGTGCCCGCCATGCAAGTCATGGCGCCAATGTGA
Transcript >OphauB2|7806
ATGGGAGACGTGCCGACTGCTTCGGCCCCGGAGGCAGCACAAGTCTCTCTTGCTGGTGTCGACGCCAACCAAAAG
CCCAGCGTCAAGCAGCAGCCCAACCAGCCGGCGACGATAGCCACCAGCCACCAGGCCTTTGCGTCGCAGCTCGAC
ATGGCCAGCCAACAGACACAGCAAGGCTCATACCATGTGGCACCCATGGGCGGCTATCGTCCAGGCCAGTATCCT
CCGCCCGCGCACCGCTACATGCCCCCCGTCATGCCGCCCATGGCTCCGGTGCCTCAGTACGGAGCGCCGCCAATG
GCATACTACATGCATCAAGCGCCCATGAGCCCCTACTACGCCGCTGGCCATGGTCCGCCCTCGCACATGCAAAGC
CCCAGGCACAACATGGCCTACTTCGCCAACCATGTCCTCATGGACCAAGCCCAGTCTCCCTTTTACTACCAGCCG
CCAGCCCATGAGTATTCCATGCCGCCACAGGCCCAGCCCATGGTTGTGCCAGCTGGGCTCTCGACAAGGTCTCCT
GATGCTCCAGATGCACGCTCGCCAGCTGACGGCTATGATTGCCTTGGTGACAGCAATGGCACAGGCCCAGACCAA
GGCCACGACGGGCACAAGACGGTGCGAGGCCCTCCCAGAAAGCCCCGCCAGAGTGGGCACGCCATCTGGATTGGC
AACCTGCCCCCGCAGACAGACCTGATGAGTCTTGTCCACCACGTCTGCAAGGAGACCACAGGGCTCGAGTCCGTC
TTTCTCATTTCAAAGAGCAACTGCGCCTTTGCCAATTTCAAAGACGACAAGACGTGCCTGGCAGCCCAGCAAACG
CTGCACGATTCGAGATACAAGACGGTCCGCCTCGTCAGCCGCTTGCGCAAAAACACGGTCGAGGGCGTGGCTGGA
CTGACTGCGCCCACCGGGCCAGCTCTTCCTCCGGGCGACTCAACACGCGGTGCTTCTCCGACTTTGCCCTCGAGT
TCCAGTCTCAGCCCGCCCACCAAGCCCAAGGCCAGCCCGGCTGTCGTCGACGGCCATGCTCACCAAGACAGATTC
TTTATCCTCAAGAGCTTGACCATGGAGGACCTCGAGTTGAGCGTGCAGACTGGCATCTGGGCTACACAGTCACAC
AACGAGGACACCTTGAACAATGCCTTCAAGAAATACGACAGTGTCTACCTTATTTTCTCAGCCAACAAATCGGGC
GAGTACTTTGGCTATGCGCGCATGATGTCCGAGGTCAACAAAGATCCAGAAGCCGCCATTGAATTCGCACCCAAG
TCGCAGGCTGCCAGTGCTCTGCAGCTGCCCAGAGCAATCACCACAGAGGCAACCGAGCACGCACCCAAGGGCACA
ATCATTGATGACTCGGCTCGCGGCACCATTTTCTGGGAGGCGGAGCGTGACGACTGCGACACCGCCTCGGACAAT
GCCAGCGATGTGTCGAGCAACAGGAGCTGCGAGCCCGACCAAGGCACAAAGACGTGGGGCAAGCCCTTCAAACTC
GAGTGGCTCTCCGTTTCCCGACTACCCTTTTATAGAACAAGAGGCCTTCGAAATCCCTGGAACTCCAACAGAGAG
GTCAAGATTGCCCGAGATGGAACCGAGTTGGAGCCGTCGGTGGGTCGCAAGCTCATTGGCCTCTTCAACCGCGTC
CAGAGCCCGGGGCTGACATCGTCCATGATGCGTCCACCCGTGCCCGCCATGCAAGTCATGGCGCCAATGTGA
Gene >OphauB2|7806
ATGGGAGACGTGCCGACTGCTTCGGCCCCGGAGGCAGCACAAGTCTCTCTTGCTGGTGTCGACGCCAACCAAAAG
CCCAGCGTCAAGCAGCAGCCCAACCAGCCGGCGACGATAGCCACCAGCCACCAGGCCTTTGCGTCGCAGCTCGAC
ATGGCCAGCCAACAGACACAGCAAGGCTCATACCATGTGGCACCCATGGGCGGCTATCGTCCAGGCCAGTATCCT
CCGCCCGCGCACCGCTACATGCCCCCCGTCATGCCGCCCATGGCTCCGGTGCCTCAGTACGGAGCGCCGCCAATG
GCATACTACATGCATCAAGCGCCCATGAGCCCCTACTACGCCGCTGGCCATGGTCCGCCCTCGCACATGCAAAGC
CCCAGGCACAACATGGCCTACTTCGCCAACCATGTCCTCATGGACCAAGCCCAGTCTCCCTTTTACTACCAGCCG
CCAGCCCATGAGTATTCCATGCCGCCACAGGCCCAGCCCATGGTTGTGCCAGCTGGGCTCTCGACAAGGTCTCCT
GATGCTCCAGATGCACGCTCGCCAGCTGACGGCTATGATTGCCTTGGTGACAGCAATGGCACAGGCCCAGGTGAG
CAACATGTCGCCTCGCCACACCCATCAAGACACAGCTTACCCCTCGAGCAGACCAAGGCCACGACGGGCACAAGA
CGGTGCGAGGCCCTCCCAGAAAGCCCCGCCAGAGTGGTAAGCAGACAGTGGCCGGCACAGACCGTGGCCAAGGCG
GCCAGAGACTTACACACCGTCTTCAGGGCACGCCATCTGGATTGGCAACCTGCCCCCGCAGACAGACCTGATGAG
TCTTGTCCACCACGTCTGCAAGGAGACCACAGGGCTCGAGTCCGTCTTTCTCATTTCAAAGAGCAACTGCGCCTT
TGCCAATTTCAAAGACGACAAGACGTGCCTGGCAGCCCAGCAAACGCTGCACGATTCGAGATACAAGACGGTCCG
CCTCGTCAGCCGCTTGCGCAAAAACACGGTCGAGGGCGTGGCTGGACTGACTGCGCCCACCGGGCCAGCTCTTCC
TCCGGGCGACTCAACACGCGGTGCTTCTCCGACTTTGCCCTCGAGTTCCAGTCTCAGCCCGCCCACCAAGCCCAA
GGCCAGCCCGGCTGTCGTCGACGGCCATGCTCACCAAGACAGATTCTTTATCCTCAAGAGCTTGACCATGGAGGA
CCTCGAGTTGAGCGTGCAGACTGGCATCTGGGCTACACAGTCACACAACGAGGACACCTTGAACAATGCCTTCAA
GGTCAGTCTTGCGGCCAAGGTCACGGAGCGGCCGACTGATGCCAAACGTGTACAGAAATACGACAGTGTCTACCT
TATTTTCTCAGCCAACAAATCGGGCGAGTACTTTGGCTATGCGCGCATGATGTCCGAGGTCAACAAAGATCCAGA
AGCCGCCATTGAATTCGCACCCAAGTCGCAGGCTGCCAGTGCTCTGCAGCTGCCCAGAGCAATCACCACAGAGGC
AACCGAGCACGCACCCAAGGGCACAATCATTGATGACTCGGCTCGCGGCACCATTTTCTGGGAGGCGGAGCGTGA
CGACTGCGACACCGCCTCGGACAATGCCAGCGATGTGTCGAGCAACAGGAGCTGCGAGCCCGACCAAGGCACAAA
GACGTGGGGCAAGCCCTTCAAACTCGAGTGGCTCTCCGTTTCCCGACTACCCTTTTATAGAACAAGAGGCCTTCG
AAATCCCTGGAACTCCAACAGAGAGGTCAAGATTGCCCGAGATGGAACCGAGTTGGAGCCGTCGGTGGGTCGCAA
GCTCATTGGCCTCTTCAACCGCGTCCAGAGCCCGGGGCTGACATCGTCCATGATGCGTCCACCCGTGCCCGCCAT
GCAAGTCATGGCGCCAATGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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