Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|7769
Gene name
LocationContig_88:66544..68758
Strand+
Gene length (bp)2214
Transcript length (bp)2037
Coding sequence length (bp)2037
Protein length (aa) 679

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04049 ANAPC8 Anaphase promoting complex subunit 8 / Cdc23 4.0E-54 10 191
PF13181 TPR_8 Tetratricopeptide repeat 2.8E-03 383 414
PF13181 TPR_8 Tetratricopeptide repeat 6.8E-05 417 447
PF13181 TPR_8 Tetratricopeptide repeat 1.2E-02 542 568
PF13414 TPR_11 TPR repeat 1.2E-06 423 462

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|O94556|APC8_SCHPO Anaphase-promoting complex subunit 8 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cut23 PE=1 SV=2 6 670 6.0E-137
sp|P16522|CDC23_YEAST Anaphase-promoting complex subunit CDC23 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CDC23 PE=1 SV=1 8 667 3.0E-99
sp|Q9STS3|CDC23_ARATH Anaphase-promoting complex subunit 8 OS=Arabidopsis thaliana GN=APC8 PE=1 SV=1 12 664 4.0E-89
sp|A1A4R8|CDC23_BOVIN Cell division cycle protein 23 homolog OS=Bos taurus GN=CDC23 PE=2 SV=1 24 510 6.0E-84
sp|Q9UJX2|CDC23_HUMAN Cell division cycle protein 23 homolog OS=Homo sapiens GN=CDC23 PE=1 SV=3 24 510 9.0E-84
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Swissprot ID Swissprot Description Start End E-value
sp|O94556|APC8_SCHPO Anaphase-promoting complex subunit 8 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cut23 PE=1 SV=2 6 670 6.0E-137
sp|P16522|CDC23_YEAST Anaphase-promoting complex subunit CDC23 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CDC23 PE=1 SV=1 8 667 3.0E-99
sp|Q9STS3|CDC23_ARATH Anaphase-promoting complex subunit 8 OS=Arabidopsis thaliana GN=APC8 PE=1 SV=1 12 664 4.0E-89
sp|A1A4R8|CDC23_BOVIN Cell division cycle protein 23 homolog OS=Bos taurus GN=CDC23 PE=2 SV=1 24 510 6.0E-84
sp|Q9UJX2|CDC23_HUMAN Cell division cycle protein 23 homolog OS=Homo sapiens GN=CDC23 PE=1 SV=3 24 510 9.0E-84
sp|Q8BGZ4|CDC23_MOUSE Cell division cycle protein 23 homolog OS=Mus musculus GN=Cdc23 PE=1 SV=2 24 510 1.0E-83
sp|Q86B11|CDC23_DICDI Anaphase-promoting complex subunit 8 OS=Dictyostelium discoideum GN=anapc8 PE=3 SV=1 218 510 2.0E-73
sp|Q19294|CDC23_CAEEL Cell division cycle protein 23 homolog OS=Caenorhabditis elegans GN=mat-3 PE=1 SV=2 21 600 2.0E-41
sp|Q06AN9|CD27A_ARATH Cell division cycle protein 27 homolog A OS=Arabidopsis thaliana GN=CDC27A PE=1 SV=2 260 560 2.0E-26
sp|Q8LGU6|CD27B_ARATH Cell division cycle protein 27 homolog B OS=Arabidopsis thaliana GN=CDC27B PE=1 SV=1 329 514 1.0E-24
sp|P17885|BIMA_EMENI Protein bimA OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=bimA PE=2 SV=1 333 510 2.0E-24
sp|P30260|CDC27_HUMAN Cell division cycle protein 27 homolog OS=Homo sapiens GN=CDC27 PE=1 SV=2 325 514 3.0E-24
sp|A7Z061|CDC27_BOVIN Cell division cycle protein 27 homolog OS=Bos taurus GN=CDC27 PE=2 SV=1 325 514 3.0E-24
sp|Q54J83|APC3_DICDI Anaphase-promoting complex subunit 3 OS=Dictyostelium discoideum GN=anapc3 PE=3 SV=1 324 511 4.0E-24
sp|A2A6Q5|CDC27_MOUSE Cell division cycle protein 27 homolog OS=Mus musculus GN=Cdc27 PE=1 SV=1 325 514 4.0E-24
sp|Q4V8A2|CDC27_RAT Cell division cycle protein 27 homolog OS=Rattus norvegicus GN=Cdc27 PE=2 SV=1 325 514 5.0E-24
sp|P10505|APC3_SCHPO Anaphase-promoting complex subunit 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=nuc2 PE=1 SV=3 312 514 3.0E-19
sp|Q9N593|CDC27_CAEEL Cell division cycle protein 27 homolog OS=Caenorhabditis elegans GN=mat-1 PE=1 SV=1 343 539 1.0E-17
sp|P38042|CDC27_YEAST Anaphase-promoting complex subunit CDC27 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CDC27 PE=1 SV=2 337 505 2.0E-15
sp|O60184|CYC8_SCHPO General transcriptional corepressor ssn6 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ssn6 PE=1 SV=1 285 510 6.0E-08
sp|Q9FMA3|PEX5_ARATH Peroxisome biogenesis protein 5 OS=Arabidopsis thaliana GN=PEX5 PE=1 SV=1 368 487 2.0E-06
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GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005680 anaphase-promoting complex Yes
GO:0030071 regulation of mitotic metaphase/anaphase transition Yes
GO:0051128 regulation of cellular component organization No
GO:0010564 regulation of cell cycle process No
GO:0033043 regulation of organelle organization No
GO:0005575 cellular_component No
GO:1902099 regulation of metaphase/anaphase transition of cell cycle No
GO:0033045 regulation of sister chromatid segregation No
GO:0007346 regulation of mitotic cell cycle No
GO:0005488 binding No
GO:0008150 biological_process No
GO:0003674 molecular_function No
GO:0051983 regulation of chromosome segregation No
GO:0000151 ubiquitin ligase complex No
GO:0140535 intracellular protein-containing complex No
GO:1990234 transferase complex No
GO:1901990 regulation of mitotic cell cycle phase transition No
GO:1902494 catalytic complex No
GO:0050789 regulation of biological process No
GO:0051726 regulation of cell cycle No
GO:0010965 regulation of mitotic sister chromatid separation No
GO:1901987 regulation of cell cycle phase transition No
GO:1905818 regulation of chromosome separation No
GO:0031461 cullin-RING ubiquitin ligase complex No
GO:0065007 biological regulation No
GO:0033044 regulation of chromosome organization No
GO:0000152 nuclear ubiquitin ligase complex No
GO:0050794 regulation of cellular process No
GO:0140513 nuclear protein-containing complex No
GO:0032991 protein-containing complex No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 13 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|7769
MPLTPQEVAQLRIALQDAVVKCSERCLYQSAKWAAELLNALPEADTRDAEGDADLYSSYMSPLLSPNSDPEEAAL
EAQEVGKYLLAKSFFDCKEFDRCAAVFLPETLLSAVLESHTVDATTSTTTQKDKAKAKAQDAGAALSSSKSPLPR
ISQKSLFLALYAKFMSGEKSKYEESEMVMGPQDVGTVVNKQLLPVGRYLAAWFAERTSDDGDCPANQGWLEYLYG
MVLAKEKNDSKALELLIRSVHKMPMNWGCWLEMASLISRVEELNKVLKHCPQNIVAFMFHLHMALELYQQSSSLA
VNLEKLLRIFPTSSFLLSCNALLAYHAKDLIAAEQQFSQLLALHPHRLDSLDHYSNILYILNRRPKLAFVAQLCS
SVDKFRPESCVVIGNYYSLLSMHEKAVQFFRRALTLDRTCLSAWTLMGHEYVELKNTHAAIESYRRAVDVNRRDY
RAWYGLGQTYEMLEMHAYALWYYKKAAGLRPWDGKMWLAVGTCMQKMGRERDGIKALKRALLADTYYDAGSSLGG
GRNIFGAHKPTGCMDPEILLQIAVMYDQVGDEDEAKAYMELCVAQEVGSSAMAAAADGSPGDSAMARNDSPGGSD
DYDNNGGSGDEGTGVTPATSKARIWLARHAMRTADYVTANRLATELCQDGVEVEEAKALVREIRSIMDSTSAGFD
STG*
Coding >OphauB2|7769
ATGCCGCTGACCCCTCAAGAGGTGGCGCAGCTGCGCATCGCTCTGCAGGATGCTGTCGTCAAATGCTCGGAGCGA
TGCCTTTATCAATCGGCGAAATGGGCGGCCGAGCTTCTCAATGCACTGCCAGAAGCAGACACACGCGATGCAGAA
GGCGACGCCGATTTATATTCGAGCTACATGTCCCCATTGCTGTCGCCCAACTCGGACCCGGAAGAGGCGGCGCTC
GAAGCTCAGGAAGTGGGCAAATACCTCTTGGCCAAGTCGTTTTTTGACTGCAAAGAGTTTGATCGCTGCGCCGCC
GTTTTCCTGCCCGAGACGCTGCTCTCGGCTGTTTTGGAATCACATACGGTGGATGCGACGACGTCGACAACGACA
CAAAAGGACAAGGCTAAAGCCAAGGCTCAAGATGCGGGCGCAGCCTTGTCATCAAGCAAGAGTCCCCTGCCGCGA
ATCAGCCAAAAGAGCTTGTTTCTCGCTCTCTATGCCAAGTTTATGTCTGGTGAAAAGAGCAAATACGAAGAGTCG
GAAATGGTCATGGGTCCGCAAGACGTGGGCACTGTTGTCAACAAGCAGCTTTTGCCTGTTGGGCGTTATTTGGCT
GCCTGGTTTGCCGAGAGGACAAGCGACGATGGCGATTGCCCGGCAAATCAAGGCTGGCTCGAGTACTTATACGGC
ATGGTCCTTGCCAAAGAGAAGAATGACTCCAAGGCCCTCGAGTTGCTGATACGAAGCGTGCACAAGATGCCCATG
AACTGGGGCTGCTGGCTCGAGATGGCTTCACTCATTTCTAGGGTGGAAGAGTTGAACAAGGTGTTGAAGCACTGC
CCGCAGAACATTGTCGCCTTCATGTTCCATCTCCACATGGCACTCGAGTTGTACCAGCAATCTTCTAGCCTGGCA
GTCAACCTGGAGAAGCTGTTGCGCATCTTTCCAACTTCGTCCTTTCTCCTGAGCTGCAACGCGCTGCTTGCATAC
CACGCCAAGGATCTGATTGCTGCCGAGCAACAATTTAGCCAGCTGCTGGCTCTCCACCCCCACAGACTCGACTCG
CTGGACCACTACTCCAACATACTCTACATTCTGAATCGCCGGCCGAAACTGGCCTTTGTGGCGCAGCTTTGCTCA
AGCGTGGACAAGTTTCGGCCAGAGTCGTGCGTTGTTATTGGAAACTACTACTCGCTGCTTTCTATGCACGAGAAG
GCGGTTCAGTTCTTCCGCAGAGCCCTGACGCTGGACCGGACCTGTCTCTCAGCCTGGACGCTCATGGGCCACGAA
TACGTGGAGCTCAAGAACACACACGCCGCCATTGAGTCGTATCGGCGCGCCGTTGACGTCAACCGACGAGACTAT
CGAGCCTGGTACGGGCTGGGGCAGACGTACGAGATGCTGGAAATGCACGCGTATGCGCTCTGGTACTACAAAAAG
GCGGCTGGTCTCCGGCCGTGGGACGGCAAGATGTGGCTGGCTGTGGGCACGTGCATGCAAAAGATGGGCCGTGAG
CGAGACGGCATCAAGGCGCTCAAGCGAGCGCTGCTGGCCGACACATACTATGACGCGGGCAGCAGTCTTGGGGGC
GGGCGCAACATCTTTGGCGCCCACAAGCCCACGGGCTGCATGGATCCCGAGATATTGCTGCAGATTGCTGTCATG
TACGACCAAGTGGGCGACGAGGACGAGGCCAAGGCATACATGGAGCTTTGTGTGGCGCAAGAGGTGGGAAGCAGC
GCCATGGCGGCGGCGGCAGACGGTAGTCCCGGCGACTCTGCCATGGCGCGCAACGACTCACCAGGCGGCTCCGAC
GACTACGATAACAATGGCGGCAGTGGCGACGAGGGCACAGGCGTCACTCCAGCCACGAGCAAGGCGCGCATCTGG
CTCGCCCGCCACGCAATGCGCACCGCCGACTATGTCACGGCAAACAGACTGGCCACGGAGCTATGCCAGGACGGA
GTAGAGGTTGAGGAAGCAAAGGCCCTGGTGCGCGAAATCCGCTCCATCATGGACTCGACGAGTGCTGGCTTTGAC
TCGACTGGCTAG
Transcript >OphauB2|7769
ATGCCGCTGACCCCTCAAGAGGTGGCGCAGCTGCGCATCGCTCTGCAGGATGCTGTCGTCAAATGCTCGGAGCGA
TGCCTTTATCAATCGGCGAAATGGGCGGCCGAGCTTCTCAATGCACTGCCAGAAGCAGACACACGCGATGCAGAA
GGCGACGCCGATTTATATTCGAGCTACATGTCCCCATTGCTGTCGCCCAACTCGGACCCGGAAGAGGCGGCGCTC
GAAGCTCAGGAAGTGGGCAAATACCTCTTGGCCAAGTCGTTTTTTGACTGCAAAGAGTTTGATCGCTGCGCCGCC
GTTTTCCTGCCCGAGACGCTGCTCTCGGCTGTTTTGGAATCACATACGGTGGATGCGACGACGTCGACAACGACA
CAAAAGGACAAGGCTAAAGCCAAGGCTCAAGATGCGGGCGCAGCCTTGTCATCAAGCAAGAGTCCCCTGCCGCGA
ATCAGCCAAAAGAGCTTGTTTCTCGCTCTCTATGCCAAGTTTATGTCTGGTGAAAAGAGCAAATACGAAGAGTCG
GAAATGGTCATGGGTCCGCAAGACGTGGGCACTGTTGTCAACAAGCAGCTTTTGCCTGTTGGGCGTTATTTGGCT
GCCTGGTTTGCCGAGAGGACAAGCGACGATGGCGATTGCCCGGCAAATCAAGGCTGGCTCGAGTACTTATACGGC
ATGGTCCTTGCCAAAGAGAAGAATGACTCCAAGGCCCTCGAGTTGCTGATACGAAGCGTGCACAAGATGCCCATG
AACTGGGGCTGCTGGCTCGAGATGGCTTCACTCATTTCTAGGGTGGAAGAGTTGAACAAGGTGTTGAAGCACTGC
CCGCAGAACATTGTCGCCTTCATGTTCCATCTCCACATGGCACTCGAGTTGTACCAGCAATCTTCTAGCCTGGCA
GTCAACCTGGAGAAGCTGTTGCGCATCTTTCCAACTTCGTCCTTTCTCCTGAGCTGCAACGCGCTGCTTGCATAC
CACGCCAAGGATCTGATTGCTGCCGAGCAACAATTTAGCCAGCTGCTGGCTCTCCACCCCCACAGACTCGACTCG
CTGGACCACTACTCCAACATACTCTACATTCTGAATCGCCGGCCGAAACTGGCCTTTGTGGCGCAGCTTTGCTCA
AGCGTGGACAAGTTTCGGCCAGAGTCGTGCGTTGTTATTGGAAACTACTACTCGCTGCTTTCTATGCACGAGAAG
GCGGTTCAGTTCTTCCGCAGAGCCCTGACGCTGGACCGGACCTGTCTCTCAGCCTGGACGCTCATGGGCCACGAA
TACGTGGAGCTCAAGAACACACACGCCGCCATTGAGTCGTATCGGCGCGCCGTTGACGTCAACCGACGAGACTAT
CGAGCCTGGTACGGGCTGGGGCAGACGTACGAGATGCTGGAAATGCACGCGTATGCGCTCTGGTACTACAAAAAG
GCGGCTGGTCTCCGGCCGTGGGACGGCAAGATGTGGCTGGCTGTGGGCACGTGCATGCAAAAGATGGGCCGTGAG
CGAGACGGCATCAAGGCGCTCAAGCGAGCGCTGCTGGCCGACACATACTATGACGCGGGCAGCAGTCTTGGGGGC
GGGCGCAACATCTTTGGCGCCCACAAGCCCACGGGCTGCATGGATCCCGAGATATTGCTGCAGATTGCTGTCATG
TACGACCAAGTGGGCGACGAGGACGAGGCCAAGGCATACATGGAGCTTTGTGTGGCGCAAGAGGTGGGAAGCAGC
GCCATGGCGGCGGCGGCAGACGGTAGTCCCGGCGACTCTGCCATGGCGCGCAACGACTCACCAGGCGGCTCCGAC
GACTACGATAACAATGGCGGCAGTGGCGACGAGGGCACAGGCGTCACTCCAGCCACGAGCAAGGCGCGCATCTGG
CTCGCCCGCCACGCAATGCGCACCGCCGACTATGTCACGGCAAACAGACTGGCCACGGAGCTATGCCAGGACGGA
GTAGAGGTTGAGGAAGCAAAGGCCCTGGTGCGCGAAATCCGCTCCATCATGGACTCGACGAGTGCTGGCTTTGAC
TCGACTGGCTAG
Gene >OphauB2|7769
ATGCCGCTGACCCCTCAAGAGGTGGCGCAGCTGCGCATCGCTCTGCAGGATGCTGTCGTCAAATGCTCGGAGCGA
TGCCTTTATCAATCGGCGAAATGGTACATGCCAGTCGTTTTGTCTTGGTCATGGAGCTTGAGGGCGCTGACGGCT
TTACAGGGCGGCCGAGCTTCTCAATGCACTGCCAGAAGCAGACACACGCGATGCAGAAGGCGACGCCGATTTATA
TTCGAGCTACATGTCCCCATTGCTGTCGCCCAACTCGGACCCGGAAGAGGCGGCGCTCGAAGCTCAGGAAGTGGG
CAAATACCTCTTGGCCAAGTCGTTTTTTGACTGCAAAGAGTTTGATCGCTGCGCCGCCGTTTTCCTGCCCGAGAC
GCTGCTCTCGGCTGTTTTGGAATCACATACGGTGGATGCGACGACGTCGACAACGACACAAAAGGACAAGGCTAA
AGCCAAGGCTCAAGATGCGGGCGCAGCCTTGTCATCAAGCAAGAGTCCCCTGCCGCGAATCAGCCAAAAGAGCTT
GTTTCTCGCTCTCTATGCCAAGTTTATGTCTGGTGAAAAGAGCAAATACGAAGAGTCGGAAATGGTCATGGGTCC
GCAAGACGTGGGCACTGTTGTCAACAAGCAGCTTTTGCCTGTTGGGCGTTATTTGGCTGCCTGGTTTGCCGAGAG
GACAAGCGACGATGGCGATTGCCCGGCAAATCAAGGCTGGCTCGAGTACTTGTATGGCGTCTTGTCTATGTACTG
TATTGCTTGAAAACACCACAGCTAATGATCCTGCTCCAGATACGGCATGGTCCTTGCCAAAGAGAAGAATGACTC
CAAGGCCCTCGAGTTGCTGATACGAAGCGTGCACAAGATGCCCATGAACTGGGGCTGCTGGCTCGAGATGGCTTC
ACTCATTTCTAGGGTGGAAGAGGTAGGTTGGCTGCGTCTCACGGCTGCTCAGTACAAGGCTTACTAACGATTGCG
CAGTTGAACAAGGTGTTGAAGCACTGCCCGCAGAACATTGTCGCCTTCATGTTCCATCTCCACATGGCACTCGAG
TTGTACCAGCAATCTTCTAGCCTGGCAGTCAACCTGGAGAAGCTGTTGCGCATCTTTCCAACTTCGTCCTTTCTC
CTGAGCTGCAACGCGCTGCTTGCATACCACGCCAAGGATCTGATTGCTGCCGAGCAACAATTTAGCCAGCTGCTG
GCTCTCCACCCCCACAGACTCGACTCGCTGGACCACTACTCCAACATACTCTACATTCTGAATCGCCGGCCGAAA
CTGGCCTTTGTGGCGCAGCTTTGCTCAAGCGTGGACAAGTTTCGGCCAGAGTCGTGCGTTGTTATTGGAAACTAC
TACTCGCTGCTTTCTATGCACGAGAAGGCGGTTCAGTTCTTCCGCAGAGCCCTGACGCTGGACCGGACCTGTCTC
TCAGCCTGGACGCTCATGGGCCACGAATACGTGGAGCTCAAGAACACACACGCCGCCATTGAGTCGTATCGGCGC
GCCGTTGACGTCAACCGACGAGACTATCGAGCCTGGTACGGGCTGGGGCAGACGTACGAGATGCTGGAAATGCAC
GCGTATGCGCTCTGGTACTACAAAAAGGCGGCTGGTCTCCGGCCGTGGGACGGCAAGATGTGGCTGGCTGTGGGC
ACGTGCATGCAAAAGATGGGCCGTGAGCGAGACGGCATCAAGGCGCTCAAGCGAGCGCTGCTGGCCGACACATAC
TATGACGCGGGCAGCAGTCTTGGGGGCGGGCGCAACATCTTTGGCGCCCACAAGCCCACGGGCTGCATGGATCCC
GAGATATTGCTGCAGATTGCTGTCATGTACGACCAAGTGGGCGACGAGGACGAGGCCAAGGCATACATGGAGCTT
TGTGTGGCGCAAGAGGTGGGAAGCAGCGCCATGGCGGCGGCGGCAGACGGTAGTCCCGGCGACTCTGCCATGGCG
CGCAACGACTCACCAGGCGGCTCCGACGACTACGATAACAATGGCGGCAGTGGCGACGAGGGCACAGGCGTCACT
CCAGCCACGAGCAAGGCGCGCATCTGGCTCGCCCGCCACGCAATGCGCACCGCCGACTATGTCACGGCAAACAGA
CTGGCCACGGAGCTATGCCAGGACGGAGTAGAGGTTGAGGAAGCAAAGGCCCTGGTGCGCGAAATCCGCTCCATC
ATGGACTCGACGAGTGCTGGCTTTGACTCGACTGGCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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