Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|7753
Gene name
LocationContig_88:21692..22747
Strand+
Gene length (bp)1055
Transcript length (bp)984
Coding sequence length (bp)984
Protein length (aa) 328

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13668 Ferritin_2 Ferritin-like domain 3.6E-37 49 181

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P53693|RDS1_SCHPO Protein rds1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rds1 PE=2 SV=2 53 227 1.0E-14

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|7753
MAWFKTLAVTALAATATGLPTLRKFSPRHVKSLASRQEGGAAPDSGLTDPDIFDFALTLEHLQAEFYKQGFAKFP
DSDFQALGLSDQQLKDLKVMGKAEEDHEVLIQMTLAGAGIQPVQSCEYDFGFTDAKSMVDMALVFESIGVSAYLG
AAPLVSDKALLSAAASITTVESRQQSVLRAFTGIEAVPQSFDAPLSPRSIFSMAAPFIKSCPEGSNLQIDPFPAL
EMKGGQDPMNMAVGSNVLVSMPAGAALGTSNAQAAGPTKCAFTSGGVRPAGSVFTDFSESTGCQVPPDVAGFTYL
FLTSSEPAGGAVTDDIVMAGPMPLKVS*
Coding >OphauB2|7753
ATGGCCTGGTTCAAGACGCTTGCCGTGACGGCTCTGGCTGCCACTGCCACGGGGCTGCCGACGCTGCGGAAATTC
AGTCCCCGGCACGTCAAGTCTCTGGCCTCGAGACAAGAGGGAGGAGCGGCGCCAGACTCTGGGCTGACGGACCCC
GACATTTTCGACTTTGCCCTGACGCTGGAGCACCTGCAGGCAGAATTCTACAAGCAGGGCTTTGCCAAGTTCCCC
GACTCAGACTTTCAAGCACTGGGGCTCAGCGACCAGCAGCTCAAGGACCTCAAGGTGATGGGCAAGGCCGAGGAG
GACCACGAGGTGCTGATCCAAATGACGCTGGCGGGCGCAGGCATCCAGCCGGTGCAGTCGTGCGAATACGACTTT
GGCTTCACCGACGCCAAGTCCATGGTGGACATGGCGCTCGTCTTTGAAAGCATTGGCGTCTCGGCCTACCTGGGC
GCCGCGCCGCTCGTGTCGGACAAGGCGCTGCTGAGTGCCGCCGCCAGCATCACCACGGTGGAGTCGCGCCAGCAG
AGCGTCCTGCGCGCCTTTACTGGCATCGAGGCGGTGCCCCAGTCCTTTGACGCGCCCCTCAGCCCTCGCTCCATC
TTCTCCATGGCCGCCCCCTTTATCAAGTCGTGTCCTGAGGGCTCCAATCTCCAGATTGACCCCTTTCCCGCCCTG
GAGATGAAGGGCGGCCAGGACCCCATGAACATGGCTGTTGGCTCCAACGTGCTCGTCTCCATGCCTGCTGGCGCC
GCCCTGGGAACTTCCAATGCCCAGGCTGCCGGTCCCACAAAGTGTGCCTTTACCTCGGGCGGCGTCAGGCCTGCT
GGCAGCGTCTTTACCGACTTTTCCGAGTCTACGGGCTGCCAGGTGCCTCCCGACGTGGCCGGCTTCACCTATCTC
TTCCTCACCAGCTCCGAGCCCGCAGGCGGCGCCGTCACTGACGACATTGTCATGGCCGGCCCCATGCCCCTCAAA
GTTTCATAA
Transcript >OphauB2|7753
ATGGCCTGGTTCAAGACGCTTGCCGTGACGGCTCTGGCTGCCACTGCCACGGGGCTGCCGACGCTGCGGAAATTC
AGTCCCCGGCACGTCAAGTCTCTGGCCTCGAGACAAGAGGGAGGAGCGGCGCCAGACTCTGGGCTGACGGACCCC
GACATTTTCGACTTTGCCCTGACGCTGGAGCACCTGCAGGCAGAATTCTACAAGCAGGGCTTTGCCAAGTTCCCC
GACTCAGACTTTCAAGCACTGGGGCTCAGCGACCAGCAGCTCAAGGACCTCAAGGTGATGGGCAAGGCCGAGGAG
GACCACGAGGTGCTGATCCAAATGACGCTGGCGGGCGCAGGCATCCAGCCGGTGCAGTCGTGCGAATACGACTTT
GGCTTCACCGACGCCAAGTCCATGGTGGACATGGCGCTCGTCTTTGAAAGCATTGGCGTCTCGGCCTACCTGGGC
GCCGCGCCGCTCGTGTCGGACAAGGCGCTGCTGAGTGCCGCCGCCAGCATCACCACGGTGGAGTCGCGCCAGCAG
AGCGTCCTGCGCGCCTTTACTGGCATCGAGGCGGTGCCCCAGTCCTTTGACGCGCCCCTCAGCCCTCGCTCCATC
TTCTCCATGGCCGCCCCCTTTATCAAGTCGTGTCCTGAGGGCTCCAATCTCCAGATTGACCCCTTTCCCGCCCTG
GAGATGAAGGGCGGCCAGGACCCCATGAACATGGCTGTTGGCTCCAACGTGCTCGTCTCCATGCCTGCTGGCGCC
GCCCTGGGAACTTCCAATGCCCAGGCTGCCGGTCCCACAAAGTGTGCCTTTACCTCGGGCGGCGTCAGGCCTGCT
GGCAGCGTCTTTACCGACTTTTCCGAGTCTACGGGCTGCCAGGTGCCTCCCGACGTGGCCGGCTTCACCTATCTC
TTCCTCACCAGCTCCGAGCCCGCAGGCGGCGCCGTCACTGACGACATTGTCATGGCCGGCCCCATGCCCCTCAAA
GTTTCATAA
Gene >OphauB2|7753
ATGGCCTGGTTCAAGACGCTTGCCGTGACGGCTCTGGCTGCCACTGCCACGGGGCTGCCGACGCTGCGGAAATTC
AGTCCCCGGCACGTCAAGTCTCTGGCCTCGAGACAAGAGGGAGGAGCGGCGCCAGACTCTGGGCTGACGGACCCC
GACATTTTCGACTTGTAAGTTTGTTTTGCTACTCTCTAGTGTCTGTGACGGACAGGAAAAGGCTAACCAGAGACT
TGTTTGCCAGTGCCCTGACGCTGGAGCACCTGCAGGCAGAATTCTACAAGCAGGGCTTTGCCAAGTTCCCCGACT
CAGACTTTCAAGCACTGGGGCTCAGCGACCAGCAGCTCAAGGACCTCAAGGTGATGGGCAAGGCCGAGGAGGACC
ACGAGGTGCTGATCCAAATGACGCTGGCGGGCGCAGGCATCCAGCCGGTGCAGTCGTGCGAATACGACTTTGGCT
TCACCGACGCCAAGTCCATGGTGGACATGGCGCTCGTCTTTGAAAGCATTGGCGTCTCGGCCTACCTGGGCGCCG
CGCCGCTCGTGTCGGACAAGGCGCTGCTGAGTGCCGCCGCCAGCATCACCACGGTGGAGTCGCGCCAGCAGAGCG
TCCTGCGCGCCTTTACTGGCATCGAGGCGGTGCCCCAGTCCTTTGACGCGCCCCTCAGCCCTCGCTCCATCTTCT
CCATGGCCGCCCCCTTTATCAAGTCGTGTCCTGAGGGCTCCAATCTCCAGATTGACCCCTTTCCCGCCCTGGAGA
TGAAGGGCGGCCAGGACCCCATGAACATGGCTGTTGGCTCCAACGTGCTCGTCTCCATGCCTGCTGGCGCCGCCC
TGGGAACTTCCAATGCCCAGGCTGCCGGTCCCACAAAGTGTGCCTTTACCTCGGGCGGCGTCAGGCCTGCTGGCA
GCGTCTTTACCGACTTTTCCGAGTCTACGGGCTGCCAGGTGCCTCCCGACGTGGCCGGCTTCACCTATCTCTTCC
TCACCAGCTCCGAGCCCGCAGGCGGCGCCGTCACTGACGACATTGTCATGGCCGGCCCCATGCCCCTCAAAGTTT
CATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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