Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|7698
Gene name
LocationContig_86:19330..20129
Strand-
Gene length (bp)799
Transcript length (bp)735
Coding sequence length (bp)735
Protein length (aa) 245

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PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|D4ALG0|LYSM1_ARTBC LysM domain-containing protein ARB_05157 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_05157 PE=1 SV=1 1 238 3.0E-08

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|7698
MVALKNALIALAGAELAFGAAVGRSENGNQGIAGQRTKEEMLKTNPFLTKGETLKNNPFLQAARENAAKPTPTPQ
GTAGQRTKEEMLKTNPFLTKEETLKNNPFLQAARENAAKPTPTPQGIVGQRTKEEMLKTNPFLTKEETLKNNPFL
QAGRENAAKPTPTPQPAPCQSAPTSVETPQPIQEGMVKNCVKFTKIYERMTCNDIPNINIPNFLKWNPGVGPNCE
SLQPLTHACTLAIEDKDIC*
Coding >OphauB2|7698
ATGGTTGCTCTCAAGAACGCCCTTATTGCCCTCGCCGGTGCCGAACTGGCTTTCGGAGCCGCCGTTGGCCGCTCA
GAAAACGGTAACCAGGGCATCGCTGGGCAACGTACCAAAGAGGAGATGCTCAAGACCAATCCATTTCTTACCAAA
GGGGAGACGCTCAAGAACAATCCATTTCTTCAAGCGGCCCGTGAAAACGCAGCGAAGCCAACTCCTACACCTCAG
GGCACCGCTGGGCAACGTACCAAAGAGGAGATGCTCAAGACCAATCCATTTCTTACCAAAGAGGAGACGCTCAAG
AACAATCCATTTCTTCAAGCGGCCCGTGAAAACGCAGCGAAGCCAACTCCTACACCTCAGGGCATCGTTGGGCAA
CGTACCAAAGAGGAGATGCTCAAGACCAATCCATTTCTAACCAAAGAGGAGACGCTCAAGAACAATCCATTTCTT
CAAGCGGGCCGTGAAAACGCTGCGAAGCCAACTCCTACACCTCAGCCGGCGCCGTGCCAGTCTGCTCCTACTAGC
GTTGAAACACCCCAGCCAATCCAGGAGGGCATGGTCAAGAACTGCGTCAAGTTTACTAAAATCTATGAAAGAATG
ACGTGCAACGACATCCCCAATATCAACATTCCTAACTTTCTGAAATGGAACCCCGGTGTGGGCCCAAACTGCGAG
TCTTTGCAGCCTCTCACACATGCTTGCACGCTCGCCATTGAGGACAAGGACATATGCTAG
Transcript >OphauB2|7698
ATGGTTGCTCTCAAGAACGCCCTTATTGCCCTCGCCGGTGCCGAACTGGCTTTCGGAGCCGCCGTTGGCCGCTCA
GAAAACGGTAACCAGGGCATCGCTGGGCAACGTACCAAAGAGGAGATGCTCAAGACCAATCCATTTCTTACCAAA
GGGGAGACGCTCAAGAACAATCCATTTCTTCAAGCGGCCCGTGAAAACGCAGCGAAGCCAACTCCTACACCTCAG
GGCACCGCTGGGCAACGTACCAAAGAGGAGATGCTCAAGACCAATCCATTTCTTACCAAAGAGGAGACGCTCAAG
AACAATCCATTTCTTCAAGCGGCCCGTGAAAACGCAGCGAAGCCAACTCCTACACCTCAGGGCATCGTTGGGCAA
CGTACCAAAGAGGAGATGCTCAAGACCAATCCATTTCTAACCAAAGAGGAGACGCTCAAGAACAATCCATTTCTT
CAAGCGGGCCGTGAAAACGCTGCGAAGCCAACTCCTACACCTCAGCCGGCGCCGTGCCAGTCTGCTCCTACTAGC
GTTGAAACACCCCAGCCAATCCAGGAGGGCATGGTCAAGAACTGCGTCAAGTTTACTAAAATCTATGAAAGAATG
ACGTGCAACGACATCCCCAATATCAACATTCCTAACTTTCTGAAATGGAACCCCGGTGTGGGCCCAAACTGCGAG
TCTTTGCAGCCTCTCACACATGCTTGCACGCTCGCCATTGAGGACAAGGACATATGCTAG
Gene >OphauB2|7698
ATGGTTGCTCTCAAGAACGCCCTTATTGCCCTCGCCGGTGCCGAACTGGCTTTCGGAGCCGCCGTTGGCCGCTCA
GAAAACGGTAACCAGGGCATCGCTGGGCAACGTACCAAAGAGGAGATGCTCAAGACCAATCCATTTCTTACCAAA
GGGGAGACGCTCAAGAACAATCCATTTCTTCAAGCGGCCCGTGAAAACGCAGCGAAGCCAACTCCTACACCTCAG
GGCACCGCTGGGCAACGTACCAAAGAGGAGATGCTCAAGACCAATCCATTTCTTACCAAAGAGGAGACGCTCAAG
AACAATCCATTTCTTCAAGCGGCCCGTGAAAACGCAGCGAAGCCAACTCCTACACCTCAGGGCATCGTTGGGCAA
CGTACCAAAGAGGAGATGCTCAAGACCAATCCATTTCTAACCAAAGAGGAGACGCTCAAGAACAATCCATTTCTT
CAAGCGGGCCGTGAAAACGCTGCGAAGCCAACTCCTACACCTCAGCCGGCGCCGTGCCAGTCTGCTCCTACTAGT
AAGCACAAGCCAACCGACCTGTCAACCTGTCACCACTAGTGCCCTCTAACAAGGATTCTTAGGCGTTGAAACACC
CCAGCCAATCCAGGAGGGCATGGTCAAGAACTGCGTCAAGTTTACTAAAATCTATGAAAGAATGACGTGCAACGA
CATCCCCAATATCAACATTCCTAACTTTCTGAAATGGAACCCCGGTGTGGGCCCAAACTGCGAGTCTTTGCAGCC
TCTCACACATGCTTGCACGCTCGCCATTGAGGACAAGGACATATGCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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