© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|7674 |
| Gene name | |
| Location | Contig_85:30366..32253 |
| Strand | - |
| Gene length (bp) | 1887 |
| Transcript length (bp) | 1680 |
| Coding sequence length (bp) | 1680 |
| Protein length (aa) | 560 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00999 | Na_H_Exchanger | Sodium/hydrogen exchanger family | 1.4E-49 | 24 | 450 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q99173|NAH1_ZYGRO | Na(+)/H(+) antiporter 1 OS=Zygosaccharomyces rouxii GN=SOD2 PE=3 SV=1 | 12 | 526 | 5.0E-87 |
| sp|Q99271|NAH1_YEAST | Na(+)/H(+) antiporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NHA1 PE=1 SV=1 | 12 | 455 | 6.0E-87 |
| sp|O42701|NAH2_ZYGRO | Na(+)/H(+) antiporter 2 OS=Zygosaccharomyces rouxii GN=SOD22 PE=3 SV=1 | 12 | 462 | 2.0E-86 |
| sp|O14123|NAH2_SCHPO | Probable Na(+)/H(+) antiporter C3A11.09 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sod22 PE=1 SV=1 | 12 | 455 | 4.0E-84 |
| sp|P36606|NAH_SCHPO | Na(+)/H(+) antiporter OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sod2 PE=1 SV=1 | 12 | 449 | 3.0E-70 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016021 | integral component of membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0006812 | cation transport | Yes |
| GO:0015299 | solute:proton antiporter activity | Yes |
| GO:0022804 | active transmembrane transporter activity | No |
| GO:0051234 | establishment of localization | No |
| GO:0006811 | ion transport | No |
| GO:0005575 | cellular_component | No |
| GO:0008150 | biological_process | No |
| GO:0003674 | molecular_function | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0051179 | localization | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0006810 | transport | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0015297 | antiporter activity | No |
| GO:0015298 | solute:cation antiporter activity | No |
| GO:0005215 | transporter activity | No |
| GO:0015291 | secondary active transmembrane transporter activity | No |
| GO:0009987 | cellular process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 15 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 16 | 38 | 22 |
| 2 | 42 | 64 | 22 |
| 3 | 122 | 144 | 22 |
| 4 | 190 | 212 | 22 |
| 5 | 224 | 246 | 22 |
| 6 | 266 | 285 | 19 |
| 7 | 320 | 339 | 19 |
| 8 | 349 | 371 | 22 |
| 9 | 384 | 403 | 19 |
| 10 | 432 | 454 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|7674 MAQQREIWGVPLQLTNFNITVALLGGFVSLFGLVSFLLKEHFYLSEALIALLVGAGFGPHGANWIRPKDYAGCHE HGVSAVECADMLDALTLNFCRLVLGVQLVLAGVQLPSKYLRREWRSLMLLIGPGMVCMWLATSLLVWLLAGSGSM PFLHALAVGACVTPTDPVLSAVIVKGKFADQNIAKDLQHLIVAESGTNDGLGYPFLFFALYLIKYTDPAQAMSPW LVLTWGYTILLSIVYGAIVGLLGKELLHWAEKRNYVDRESFLVFAVALALFVLGTCGLMGTDDVLACFIAGNTFT WDDWFRLQTKDDSLQPTVDMLLNVSVFLWFGAFLPWHAFELNAVPGLTTWRLAVLGLLVLALRRLPWVFAMHPWI HQIQEVRQAVFVGFFGPIGVSAIFYLYIALDFIEQHLSESKKVPRSDVEHLGETIRVVVWFLTVCSIIVHGLSIP LGTVGYLAPRTFGRVWTDSINSGTSSADTRQHRRIPLFGRWLFHNRSADVETSHRARHFAAPGAEPARQQAYIES PPSSLGHVEAQVGANAPLRPKMPLPNGQEGYGTL* |
| Coding | >OphauB2|7674 ATGGCACAGCAAAGGGAGATTTGGGGCGTTCCGCTGCAGCTAACAAACTTCAACATTACCGTGGCTCTATTGGGG GGCTTTGTCTCGCTCTTTGGACTCGTGTCCTTTCTGCTCAAAGAGCACTTCTATCTTTCTGAAGCGCTCATTGCT CTCCTGGTGGGCGCCGGCTTCGGGCCCCATGGCGCCAACTGGATCCGCCCCAAAGACTACGCCGGCTGTCACGAG CACGGCGTGTCGGCCGTCGAGTGTGCCGACATGCTGGATGCGCTGACGCTCAACTTTTGCCGCCTGGTGCTCGGA GTGCAGCTGGTGCTGGCGGGCGTGCAGCTGCCCAGCAAGTATCTGCGTCGCGAGTGGCGCTCTCTGATGCTGCTC ATTGGGCCTGGCATGGTGTGCATGTGGCTGGCGACGAGTCTGCTGGTCTGGCTTCTGGCCGGGTCTGGGTCCATG CCCTTTTTACACGCCTTGGCCGTGGGCGCTTGCGTCACGCCCACCGACCCCGTTCTTTCAGCCGTCATTGTCAAG GGAAAGTTTGCCGATCAGAACATTGCCAAGGACTTGCAGCATCTCATTGTGGCTGAGTCGGGCACCAATGACGGC CTTGGCTACCCCTTTCTCTTCTTTGCCCTCTACCTCATCAAGTACACGGACCCGGCCCAGGCCATGAGTCCGTGG CTGGTGCTCACTTGGGGCTACACTATTCTGCTGAGCATTGTATACGGAGCCATTGTCGGCCTCTTGGGAAAGGAG CTGCTGCATTGGGCGGAGAAGCGCAACTACGTCGACCGCGAGAGCTTCCTCGTCTTTGCCGTGGCCCTGGCTCTC TTCGTCCTCGGCACCTGCGGCCTCATGGGCACCGACGACGTCTTGGCCTGCTTCATTGCCGGCAACACCTTTACC TGGGATGACTGGTTCCGCCTACAGACCAAGGACGACTCTCTGCAGCCCACTGTCGACATGCTGCTCAACGTGTCC GTCTTTCTCTGGTTTGGCGCCTTTTTGCCCTGGCATGCCTTTGAGCTAAACGCCGTGCCCGGCCTGACAACATGG CGCCTCGCCGTCCTGGGCCTCCTCGTCTTGGCCTTGCGCCGCTTGCCCTGGGTCTTTGCCATGCATCCCTGGATT CATCAGATCCAAGAGGTCCGCCAGGCCGTCTTTGTCGGCTTTTTTGGCCCCATTGGCGTGTCGGCCATCTTTTAC CTCTACATTGCTCTTGATTTCATTGAGCAGCATCTGAGTGAGAGCAAAAAGGTGCCCCGGAGCGATGTTGAGCAT CTGGGTGAGACCATTCGCGTTGTTGTTTGGTTTCTCACCGTCTGCAGCATTATTGTTCACGGCCTCAGTATTCCT CTCGGGACAGTTGGCTATCTCGCCCCGCGCACCTTTGGCCGTGTCTGGACCGATAGCATAAATAGTGGCACCTCG AGTGCCGACACGCGACAACATCGGCGTATCCCGCTCTTTGGGCGATGGCTTTTTCACAATCGCAGTGCTGACGTT GAAACAAGCCACCGAGCAAGACACTTTGCTGCCCCTGGTGCAGAGCCGGCGAGACAACAAGCTTACATTGAGTCG CCTCCAAGCTCCTTGGGCCATGTTGAAGCACAGGTAGGAGCCAATGCGCCGCTGCGACCAAAGATGCCTTTGCCC AATGGACAAGAAGGATATGGCACGCTGTAA |
| Transcript | >OphauB2|7674 ATGGCACAGCAAAGGGAGATTTGGGGCGTTCCGCTGCAGCTAACAAACTTCAACATTACCGTGGCTCTATTGGGG GGCTTTGTCTCGCTCTTTGGACTCGTGTCCTTTCTGCTCAAAGAGCACTTCTATCTTTCTGAAGCGCTCATTGCT CTCCTGGTGGGCGCCGGCTTCGGGCCCCATGGCGCCAACTGGATCCGCCCCAAAGACTACGCCGGCTGTCACGAG CACGGCGTGTCGGCCGTCGAGTGTGCCGACATGCTGGATGCGCTGACGCTCAACTTTTGCCGCCTGGTGCTCGGA GTGCAGCTGGTGCTGGCGGGCGTGCAGCTGCCCAGCAAGTATCTGCGTCGCGAGTGGCGCTCTCTGATGCTGCTC ATTGGGCCTGGCATGGTGTGCATGTGGCTGGCGACGAGTCTGCTGGTCTGGCTTCTGGCCGGGTCTGGGTCCATG CCCTTTTTACACGCCTTGGCCGTGGGCGCTTGCGTCACGCCCACCGACCCCGTTCTTTCAGCCGTCATTGTCAAG GGAAAGTTTGCCGATCAGAACATTGCCAAGGACTTGCAGCATCTCATTGTGGCTGAGTCGGGCACCAATGACGGC CTTGGCTACCCCTTTCTCTTCTTTGCCCTCTACCTCATCAAGTACACGGACCCGGCCCAGGCCATGAGTCCGTGG CTGGTGCTCACTTGGGGCTACACTATTCTGCTGAGCATTGTATACGGAGCCATTGTCGGCCTCTTGGGAAAGGAG CTGCTGCATTGGGCGGAGAAGCGCAACTACGTCGACCGCGAGAGCTTCCTCGTCTTTGCCGTGGCCCTGGCTCTC TTCGTCCTCGGCACCTGCGGCCTCATGGGCACCGACGACGTCTTGGCCTGCTTCATTGCCGGCAACACCTTTACC TGGGATGACTGGTTCCGCCTACAGACCAAGGACGACTCTCTGCAGCCCACTGTCGACATGCTGCTCAACGTGTCC GTCTTTCTCTGGTTTGGCGCCTTTTTGCCCTGGCATGCCTTTGAGCTAAACGCCGTGCCCGGCCTGACAACATGG CGCCTCGCCGTCCTGGGCCTCCTCGTCTTGGCCTTGCGCCGCTTGCCCTGGGTCTTTGCCATGCATCCCTGGATT CATCAGATCCAAGAGGTCCGCCAGGCCGTCTTTGTCGGCTTTTTTGGCCCCATTGGCGTGTCGGCCATCTTTTAC CTCTACATTGCTCTTGATTTCATTGAGCAGCATCTGAGTGAGAGCAAAAAGGTGCCCCGGAGCGATGTTGAGCAT CTGGGTGAGACCATTCGCGTTGTTGTTTGGTTTCTCACCGTCTGCAGCATTATTGTTCACGGCCTCAGTATTCCT CTCGGGACAGTTGGCTATCTCGCCCCGCGCACCTTTGGCCGTGTCTGGACCGATAGCATAAATAGTGGCACCTCG AGTGCCGACACGCGACAACATCGGCGTATCCCGCTCTTTGGGCGATGGCTTTTTCACAATCGCAGTGCTGACGTT GAAACAAGCCACCGAGCAAGACACTTTGCTGCCCCTGGTGCAGAGCCGGCGAGACAACAAGCTTACATTGAGTCG CCTCCAAGCTCCTTGGGCCATGTTGAAGCACAGGTAGGAGCCAATGCGCCGCTGCGACCAAAGATGCCTTTGCCC AATGGACAAGAAGGATATGGCACGCTGTAA |
| Gene | >OphauB2|7674 ATGGCACAGCAAAGGGAGATTTGGGGCGTTCCGCTGCAGCTAACAAACTTCAACATTACCGTGGCTCTATTGGGG GGCTTTGTCTCGCTCTTTGGACTCGTGTCCTTTCTGCTCAAAGAGCACTTCTATCTTTCTGAAGCGCGTGAGGCA CTTTTGCCCCGAGGTCGAGCCCACGGCCGAGCCAAGACTAACAATCAAACATGCAGTCATTGCTCTCCTGGTGGG CGCCGGCTTCGGGCCCCATGGCGCCAACTGGATCCGCCCCAAAGACTACGCCGGCTGTCACGAGCACGGCGTGTC GGCCGTCGAGTGTGCCGACATGCTGGATGCGCTGACGCTCAACTTTTGCCGCCTGGTGCTCGGAGTGCAGCTGGT GCTGGCGGGCGTGCAGCTGCCCAGCAAGTATCTGCGTCGCGAGTGGCGCTCTCTGATGCTGCTCATTGGGCCTGG CATGGTGTGCATGTGGCTGGCGACGAGTCTGCTGGTCTGGCTTCTGGCCGGGTCTGGGTCCATGCCCTTTTTACA CGCCTTGGCCGTGGGCGCTTGCGTCACGCCCACCGACCCCGTTCTTTCAGCCGTCATTGTCAAGGGAAAGTTTGC CGATCAGAACATTGCCAAGGACTTGCAGCATCTCATTGTGGCTGAGTCGGGCACCAATGACGGCCTTGGCTACCC CTTTCTCTTCTTTGCCCTCTACCTCATCAAGTACACGGACCCGGCCCAGGCCATGAGTCCGTGGCTGGTGCTCAC TTGGGGCTACACTATTCTGCTGAGCATTGTATACGGAGCCATTGTCGGCCTCTTGGGAAAGGAGCTGCTGCATTG GGCGGAGAAGCGCAACTACGTCGACCGCGAGAGCTTCCTCGTCTTTGCCGTGGCCCTGGCTCTCTTCGTCCTCGG CACCTGCGGCCTCATGGGCACCGACGACGTCTTGGCCTGCTTCATTGCCGGCAACACCTTTACCTGGGATGACTG GTTCCGCCTACAGACCAAGGACGACTCTCTGCAGCCCACTGTCGACATGCTGCTCAACGTGTCCGTCTTTCTCTG GTTTGGCGCCTTTTTGCCCTGGCATGCCTTTGAGCTAAACGCCGTGCCCGGCCTGACAACATGGCGCCTCGCCGT CCTGGGCCTCCTCGTCTTGGCCTTGCGCCGCTTGCCCTGGGTCTTTGCCATGCATCCCTGGATTCATCAGATCCA AGAGGTCCGCCAGGCCGTCTTTGTCGGCTTTTTTGGCCCCATTGGCGTGTCGGCCATCTTTTACCTCTACATTGC TCTTGATTTCATTGAGCAGCATCTGAGTGAGAGCAAAAAGGTGCCCCGGAGCGATGTTGAGCATCTGGGTGAGAC CATTCGCGTTGTTGTTTGGTTTCTCACCGTCTGCAGCATTGTGAGTTTGTCTCTTCCTAGCGCCCTTGCTACTAC TTACTTGCCACGGCATTTATCATTTATCCCCAGTATGCCTCTGATGCTCCATCACCCCACCACTCTCCTTTTCCC TCTTGCTCTTCTTCTTGCCACTGACTGCATCAGATTGTTCACGGCCTCAGTATTCCTCTCGGGACAGTTGGCTAT CTCGCCCCGCGCACCTTTGGCCGTGTCTGGACCGATAGCATAAATAGTGGCACCTCGAGTGCCGACACGCGACAA CATCGGCGTATCCCGCTCTTTGGGCGATGGCTTTTTCACAATCGCAGTGCTGACGTTGAAACAAGCCACCGAGCA AGACACTTTGCTGCCCCTGGTGCAGAGCCGGCGAGACAACAAGCTTACATTGAGTCGCCTCCAAGCTCCTTGGGC CATGTTGAAGCACAGGTAGGAGCCAATGCGCCGCTGCGACCAAAGATGCCTTTGCCCAATGGACAAGAAGGATAT GGCACGCTGTAA |